Strain Fitness in Sinorhizobium meliloti 1021 around SMc00080
Experiment: LB
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
| Position | Strand | Gene | LocusTag | Fraction | LB |
|---|---|---|---|---|---|
| remove | |||||
| 1,012,688 | + | -0.5 | |||
| 1,012,689 | - | -1.0 | |||
| 1,012,689 | - | +0.3 | |||
| 1,012,773 | - | +1.4 | |||
| 1,013,072 | + | SMc00079 | 0.43 | +0.6 | |
| 1,013,072 | + | SMc00079 | 0.43 | +0.5 | |
| 1,013,072 | + | SMc00079 | 0.43 | +0.1 | |
| 1,013,073 | - | SMc00079 | 0.43 | +0.2 | |
| 1,013,467 | - | +0.2 | |||
| 1,013,546 | - | +0.1 | |||
| 1,013,547 | + | +0.1 | |||
| 1,013,547 | + | +0.5 | |||
| 1,013,547 | + | +0.1 | |||
| 1,013,547 | + | -0.5 | |||
| 1,013,548 | - | -0.3 | |||
| 1,013,637 | - | +0.3 | |||
| 1,013,995 | - | SMc00080 | 0.50 | -1.5 | |
| 1,013,995 | - | SMc00080 | 0.50 | -0.3 | |
| 1,014,120 | + | SMc00080 | 0.69 | -0.8 | |
| 1,014,314 | + | -0.3 | |||
| 1,014,314 | + | -1.3 | |||
| 1,014,315 | - | -0.2 | |||
| 1,014,315 | - | -0.7 | |||
| 1,014,315 | - | +0.0 |
Or see this region's nucleotide sequence