Experiment: LB
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt SM_b21201 and SM_b21202 are separated by 272 nucleotides SM_b21202 and SM_b21203 are separated by 100 nucleotides SM_b21203 and SM_b21666 are separated by 60 nucleotides
SM_b21201: SM_b21201 - two-component sensor histidine kinase, at 951,860 to 953,680
_b21201
SM_b21202: SM_b21202 - hypothetical protein, at 953,953 to 954,885
_b21202
SM_b21203: SM_b21203 - esteraselipase/thioesterase, at 954,986 to 955,588
_b21203
SM_b21666: SM_b21666 - hypothetical protein, at 955,649 to 955,867
_b21666
Position (kb) 953
954
955 Strain fitness (log2 ratio) -2
-1
0
1
2 at 952.987 kb on - strand, within SM_b21201 at 953.046 kb on + strand, within SM_b21201 at 953.047 kb on - strand, within SM_b21201 at 953.110 kb on - strand, within SM_b21201 at 953.209 kb on - strand, within SM_b21201 at 953.209 kb on - strand, within SM_b21201 at 953.211 kb on + strand, within SM_b21201 at 953.244 kb on + strand, within SM_b21201 at 953.244 kb on + strand, within SM_b21201 at 953.244 kb on + strand, within SM_b21201 at 953.244 kb on + strand, within SM_b21201 at 953.245 kb on - strand, within SM_b21201 at 953.245 kb on - strand, within SM_b21201 at 953.245 kb on - strand, within SM_b21201 at 953.331 kb on + strand, within SM_b21201 at 953.331 kb on + strand, within SM_b21201 at 953.332 kb on - strand, within SM_b21201 at 953.332 kb on - strand, within SM_b21201 at 953.332 kb on - strand, within SM_b21201 at 953.373 kb on + strand, within SM_b21201 at 953.373 kb on + strand, within SM_b21201 at 953.374 kb on - strand, within SM_b21201 at 953.374 kb on - strand, within SM_b21201 at 953.374 kb on - strand, within SM_b21201 at 953.374 kb on - strand, within SM_b21201 at 953.374 kb on - strand, within SM_b21201 at 953.374 kb on - strand, within SM_b21201 at 953.374 kb on - strand, within SM_b21201 at 953.587 kb on + strand at 953.587 kb on + strand at 953.587 kb on + strand at 953.587 kb on + strand at 953.587 kb on + strand at 953.588 kb on - strand at 953.588 kb on - strand at 953.590 kb on - strand at 953.590 kb on - strand at 953.590 kb on - strand at 953.674 kb on - strand at 953.750 kb on + strand at 953.751 kb on + strand at 953.752 kb on - strand at 953.984 kb on + strand at 953.985 kb on - strand at 954.088 kb on + strand, within SM_b21202 at 954.089 kb on - strand, within SM_b21202 at 954.089 kb on - strand, within SM_b21202 at 954.089 kb on - strand, within SM_b21202 at 954.089 kb on - strand, within SM_b21202 at 954.097 kb on + strand, within SM_b21202 at 954.097 kb on + strand, within SM_b21202 at 954.097 kb on + strand, within SM_b21202 at 954.098 kb on - strand, within SM_b21202 at 954.098 kb on - strand, within SM_b21202 at 954.098 kb on - strand, within SM_b21202 at 954.100 kb on + strand, within SM_b21202 at 954.100 kb on + strand, within SM_b21202 at 954.101 kb on - strand, within SM_b21202 at 954.101 kb on - strand, within SM_b21202 at 954.139 kb on + strand, within SM_b21202 at 954.428 kb on + strand, within SM_b21202 at 954.428 kb on + strand, within SM_b21202 at 954.434 kb on + strand, within SM_b21202 at 954.435 kb on - strand, within SM_b21202 at 954.435 kb on - strand, within SM_b21202 at 954.478 kb on + strand, within SM_b21202 at 954.706 kb on + strand, within SM_b21202 at 954.883 kb on + strand at 955.001 kb on + strand at 955.001 kb on + strand at 955.002 kb on - strand at 955.002 kb on - strand at 955.002 kb on - strand at 955.002 kb on - strand at 955.117 kb on + strand, within SM_b21203 at 955.117 kb on + strand, within SM_b21203 at 955.143 kb on + strand, within SM_b21203 at 955.193 kb on + strand, within SM_b21203 at 955.193 kb on + strand, within SM_b21203 at 955.194 kb on - strand, within SM_b21203 at 955.292 kb on + strand, within SM_b21203 at 955.293 kb on - strand, within SM_b21203 at 955.487 kb on + strand, within SM_b21203 at 955.487 kb on + strand, within SM_b21203 at 955.487 kb on + strand, within SM_b21203 at 955.488 kb on - strand, within SM_b21203 at 955.488 kb on - strand, within SM_b21203 at 955.611 kb on - strand at 955.611 kb on - strand at 955.635 kb on + strand at 955.636 kb on - strand at 955.776 kb on + strand, within SM_b21666 at 955.870 kb on + strand at 955.871 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction LB remove 952,987 - SM_b21201 0.62 +0.1 953,046 + SM_b21201 0.65 +0.2 953,047 - SM_b21201 0.65 -1.0 953,110 - SM_b21201 0.69 -0.4 953,209 - SM_b21201 0.74 +1.6 953,209 - SM_b21201 0.74 -0.8 953,211 + SM_b21201 0.74 +0.2 953,244 + SM_b21201 0.76 -0.0 953,244 + SM_b21201 0.76 +0.2 953,244 + SM_b21201 0.76 -0.2 953,244 + SM_b21201 0.76 -0.0 953,245 - SM_b21201 0.76 -0.2 953,245 - SM_b21201 0.76 -0.2 953,245 - SM_b21201 0.76 -0.3 953,331 + SM_b21201 0.81 -0.4 953,331 + SM_b21201 0.81 -1.3 953,332 - SM_b21201 0.81 -1.8 953,332 - SM_b21201 0.81 -0.2 953,332 - SM_b21201 0.81 -0.0 953,373 + SM_b21201 0.83 +0.4 953,373 + SM_b21201 0.83 +0.6 953,374 - SM_b21201 0.83 +0.3 953,374 - SM_b21201 0.83 -0.4 953,374 - SM_b21201 0.83 +0.6 953,374 - SM_b21201 0.83 -0.3 953,374 - SM_b21201 0.83 +1.0 953,374 - SM_b21201 0.83 +1.1 953,374 - SM_b21201 0.83 +0.0 953,587 + +0.2 953,587 + -0.4 953,587 + -0.5 953,587 + +0.2 953,587 + -0.7 953,588 - +0.4 953,588 - -0.0 953,590 - -0.2 953,590 - -0.6 953,590 - -0.1 953,674 - -1.8 953,750 + -0.1 953,751 + +0.2 953,752 - +1.0 953,984 + +1.2 953,985 - +1.4 954,088 + SM_b21202 0.14 -0.3 954,089 - SM_b21202 0.15 +2.7 954,089 - SM_b21202 0.15 -0.8 954,089 - SM_b21202 0.15 -0.3 954,089 - SM_b21202 0.15 -0.5 954,097 + SM_b21202 0.15 +0.6 954,097 + SM_b21202 0.15 -1.3 954,097 + SM_b21202 0.15 -0.7 954,098 - SM_b21202 0.16 -1.0 954,098 - SM_b21202 0.16 +1.2 954,098 - SM_b21202 0.16 -0.1 954,100 + SM_b21202 0.16 +0.4 954,100 + SM_b21202 0.16 +0.4 954,101 - SM_b21202 0.16 -0.8 954,101 - SM_b21202 0.16 -0.1 954,139 + SM_b21202 0.20 +0.2 954,428 + SM_b21202 0.51 -0.6 954,428 + SM_b21202 0.51 -1.2 954,434 + SM_b21202 0.52 +0.6 954,435 - SM_b21202 0.52 -0.4 954,435 - SM_b21202 0.52 -0.5 954,478 + SM_b21202 0.56 -0.2 954,706 + SM_b21202 0.81 -0.3 954,883 + -0.5 955,001 + -0.6 955,001 + +0.1 955,002 - -0.3 955,002 - +0.2 955,002 - +0.6 955,002 - -0.0 955,117 + SM_b21203 0.22 -0.4 955,117 + SM_b21203 0.22 -0.2 955,143 + SM_b21203 0.26 -0.6 955,193 + SM_b21203 0.34 +0.2 955,193 + SM_b21203 0.34 +0.2 955,194 - SM_b21203 0.34 -0.4 955,292 + SM_b21203 0.51 -0.2 955,293 - SM_b21203 0.51 +0.1 955,487 + SM_b21203 0.83 +0.4 955,487 + SM_b21203 0.83 +0.3 955,487 + SM_b21203 0.83 +0.4 955,488 - SM_b21203 0.83 +0.4 955,488 - SM_b21203 0.83 +0.4 955,611 - +1.2 955,611 - +0.3 955,635 + -2.3 955,636 - -0.1 955,776 + SM_b21666 0.58 +0.3 955,870 + -0.2 955,871 - +0.7
Or see this region's nucleotide sequence