Experiment: LB
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt SM_b20558 and SM_b20559 are separated by 132 nucleotides SM_b20559 and SM_b20560 are separated by 126 nucleotides
SM_b20558: SM_b20558 - hypothetical protein, at 583,428 to 583,838
_b20558
SM_b20559: SM_b20559 - hypothetical protein, at 583,971 to 584,555
_b20559
SM_b20560: SM_b20560 - hypothetical protein, at 584,682 to 584,903
_b20560
Position (kb) 583
584
585 Strain fitness (log2 ratio) -1
0
1
2 at 582.979 kb on - strand at 583.075 kb on + strand at 583.136 kb on + strand at 583.190 kb on - strand at 583.190 kb on - strand at 583.429 kb on + strand at 583.429 kb on + strand at 583.456 kb on + strand at 583.456 kb on + strand at 583.540 kb on - strand, within SM_b20558 at 583.602 kb on - strand, within SM_b20558 at 583.602 kb on - strand, within SM_b20558 at 583.602 kb on - strand, within SM_b20558 at 583.663 kb on - strand, within SM_b20558 at 583.663 kb on - strand, within SM_b20558 at 583.663 kb on - strand, within SM_b20558 at 583.663 kb on - strand, within SM_b20558 at 583.912 kb on + strand at 583.913 kb on - strand at 583.913 kb on - strand at 583.913 kb on - strand at 583.913 kb on - strand at 583.967 kb on + strand at 583.967 kb on + strand at 583.968 kb on - strand at 584.017 kb on + strand at 584.054 kb on + strand, within SM_b20559 at 584.055 kb on - strand, within SM_b20559 at 584.222 kb on + strand, within SM_b20559 at 584.463 kb on + strand, within SM_b20559 at 584.473 kb on + strand, within SM_b20559 at 584.473 kb on + strand, within SM_b20559 at 584.474 kb on - strand, within SM_b20559 at 584.504 kb on - strand at 584.526 kb on + strand at 584.527 kb on - strand at 584.544 kb on + strand at 584.545 kb on - strand at 584.620 kb on + strand at 584.621 kb on - strand at 584.680 kb on + strand at 584.886 kb on + strand at 584.887 kb on - strand at 584.899 kb on + strand at 584.899 kb on + strand at 584.899 kb on + strand at 584.899 kb on + strand at 584.899 kb on + strand at 584.900 kb on - strand at 584.900 kb on - strand at 584.900 kb on - strand at 584.900 kb on - strand at 585.035 kb on + strand at 585.120 kb on + strand at 585.120 kb on + strand at 585.121 kb on - strand at 585.203 kb on - strand at 585.203 kb on - strand at 585.387 kb on + strand at 585.387 kb on + strand at 585.497 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction LB remove 582,979 - -0.0 583,075 + +0.2 583,136 + +0.2 583,190 - +1.0 583,190 - +0.5 583,429 + -1.1 583,429 + -0.1 583,456 + -0.6 583,456 + -0.0 583,540 - SM_b20558 0.27 -0.4 583,602 - SM_b20558 0.42 -0.1 583,602 - SM_b20558 0.42 -0.5 583,602 - SM_b20558 0.42 -0.2 583,663 - SM_b20558 0.57 +0.5 583,663 - SM_b20558 0.57 -1.4 583,663 - SM_b20558 0.57 +0.3 583,663 - SM_b20558 0.57 -0.5 583,912 + +0.5 583,913 - +0.3 583,913 - +1.0 583,913 - -0.3 583,913 - -0.2 583,967 + -0.1 583,967 + +1.2 583,968 - -0.4 584,017 + -0.1 584,054 + SM_b20559 0.14 +0.7 584,055 - SM_b20559 0.14 -0.3 584,222 + SM_b20559 0.43 +0.9 584,463 + SM_b20559 0.84 -0.2 584,473 + SM_b20559 0.86 +0.2 584,473 + SM_b20559 0.86 +1.2 584,474 - SM_b20559 0.86 +0.1 584,504 - -1.7 584,526 + +0.6 584,527 - +0.7 584,544 + -0.3 584,545 - +2.2 584,620 + -0.1 584,621 - +0.7 584,680 + +0.2 584,886 + -1.3 584,887 - +0.0 584,899 + +0.4 584,899 + +0.4 584,899 + -1.1 584,899 + -0.6 584,899 + -0.1 584,900 - -0.9 584,900 - +0.3 584,900 - +0.4 584,900 - -0.5 585,035 + -0.1 585,120 + -0.2 585,120 + -0.1 585,121 - -0.0 585,203 - -1.0 585,203 - -0.7 585,387 + +0.6 585,387 + +0.5 585,497 - +0.0
Or see this region's nucleotide sequence