Experiment: LB
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt SM_b20557 and SM_b20558 are separated by 720 nucleotides
SM_b20557: SM_b20557 - hypothetical protein, at 582,372 to 582,707
_b20557
SM_b20558: SM_b20558 - hypothetical protein, at 583,428 to 583,838
_b20558
Position (kb) 582
583 Strain fitness (log2 ratio) -1
0
1
2
3 at 581.418 kb on + strand at 581.472 kb on + strand at 581.472 kb on + strand at 581.472 kb on + strand at 581.473 kb on - strand at 581.473 kb on - strand at 581.473 kb on - strand at 581.473 kb on - strand at 581.659 kb on + strand at 581.660 kb on - strand at 581.660 kb on - strand at 581.708 kb on + strand at 581.709 kb on - strand at 581.911 kb on + strand at 581.912 kb on - strand at 581.912 kb on - strand at 581.912 kb on - strand at 581.914 kb on + strand at 581.934 kb on - strand at 582.037 kb on + strand at 582.037 kb on + strand at 582.037 kb on + strand at 582.038 kb on - strand at 582.077 kb on + strand at 582.108 kb on + strand at 582.109 kb on - strand at 582.109 kb on - strand at 582.109 kb on - strand at 582.114 kb on + strand at 582.115 kb on - strand at 582.120 kb on + strand at 582.121 kb on - strand at 582.121 kb on - strand at 582.132 kb on + strand at 582.132 kb on + strand at 582.132 kb on + strand at 582.133 kb on - strand at 582.135 kb on + strand at 582.135 kb on + strand at 582.136 kb on - strand at 582.136 kb on - strand at 582.162 kb on + strand at 582.253 kb on - strand at 582.253 kb on - strand at 582.284 kb on + strand at 582.285 kb on - strand at 582.301 kb on + strand at 582.302 kb on - strand at 582.302 kb on - strand at 582.305 kb on + strand at 582.306 kb on - strand at 582.306 kb on - strand at 582.484 kb on + strand, within SM_b20557 at 582.485 kb on - strand, within SM_b20557 at 582.488 kb on + strand, within SM_b20557 at 582.519 kb on + strand, within SM_b20557 at 582.520 kb on - strand, within SM_b20557 at 582.537 kb on + strand, within SM_b20557 at 582.537 kb on + strand, within SM_b20557 at 582.537 kb on + strand, within SM_b20557 at 582.538 kb on - strand, within SM_b20557 at 582.538 kb on - strand, within SM_b20557 at 582.564 kb on + strand, within SM_b20557 at 582.565 kb on - strand, within SM_b20557 at 582.565 kb on - strand, within SM_b20557 at 582.740 kb on + strand at 582.740 kb on + strand at 582.827 kb on + strand at 582.827 kb on + strand at 582.851 kb on + strand at 582.851 kb on + strand at 582.851 kb on + strand at 582.852 kb on - strand at 582.852 kb on - strand at 582.887 kb on - strand at 582.918 kb on + strand at 582.923 kb on + strand at 582.955 kb on - strand at 582.964 kb on + strand at 582.979 kb on - strand at 583.075 kb on + strand at 583.136 kb on + strand at 583.190 kb on - strand at 583.190 kb on - strand at 583.429 kb on + strand at 583.429 kb on + strand at 583.456 kb on + strand at 583.456 kb on + strand at 583.540 kb on - strand, within SM_b20558 at 583.602 kb on - strand, within SM_b20558 at 583.602 kb on - strand, within SM_b20558 at 583.602 kb on - strand, within SM_b20558 at 583.663 kb on - strand, within SM_b20558 at 583.663 kb on - strand, within SM_b20558 at 583.663 kb on - strand, within SM_b20558 at 583.663 kb on - strand, within SM_b20558
Per-strain Table
Position Strand Gene LocusTag Fraction LB remove 581,418 + +0.3 581,472 + +0.4 581,472 + -0.2 581,472 + -0.9 581,473 - -0.1 581,473 - -0.4 581,473 - -0.2 581,473 - -0.4 581,659 + -0.7 581,660 - -0.2 581,660 - -1.5 581,708 + -0.5 581,709 - +0.6 581,911 + +0.7 581,912 - -0.0 581,912 - +0.3 581,912 - -0.6 581,914 + +3.6 581,934 - +0.5 582,037 + +0.6 582,037 + +0.1 582,037 + -0.7 582,038 - +0.5 582,077 + -0.5 582,108 + +0.5 582,109 - -0.4 582,109 - -0.3 582,109 - -1.1 582,114 + +0.1 582,115 - -0.1 582,120 + +0.3 582,121 - +0.5 582,121 - -0.4 582,132 + +0.4 582,132 + +0.1 582,132 + -1.0 582,133 - -1.2 582,135 + +0.0 582,135 + +0.4 582,136 - +1.8 582,136 - -0.1 582,162 + -0.1 582,253 - -0.3 582,253 - -0.0 582,284 + +1.4 582,285 - -0.0 582,301 + +0.1 582,302 - +0.8 582,302 - -0.1 582,305 + +1.4 582,306 - +2.2 582,306 - -0.8 582,484 + SM_b20557 0.33 +0.5 582,485 - SM_b20557 0.34 +0.2 582,488 + SM_b20557 0.35 +0.3 582,519 + SM_b20557 0.44 +0.0 582,520 - SM_b20557 0.44 -0.3 582,537 + SM_b20557 0.49 +0.4 582,537 + SM_b20557 0.49 -0.2 582,537 + SM_b20557 0.49 -0.1 582,538 - SM_b20557 0.49 +1.1 582,538 - SM_b20557 0.49 +0.5 582,564 + SM_b20557 0.57 +1.2 582,565 - SM_b20557 0.57 +0.7 582,565 - SM_b20557 0.57 +0.1 582,740 + +0.2 582,740 + -0.1 582,827 + -0.4 582,827 + +0.3 582,851 + +0.9 582,851 + -0.0 582,851 + -0.4 582,852 - -0.3 582,852 - +0.4 582,887 - +0.3 582,918 + +0.4 582,923 + +1.2 582,955 - -0.6 582,964 + +0.6 582,979 - -0.0 583,075 + +0.2 583,136 + +0.2 583,190 - +1.0 583,190 - +0.5 583,429 + -1.1 583,429 + -0.1 583,456 + -0.6 583,456 + -0.0 583,540 - SM_b20558 0.27 -0.4 583,602 - SM_b20558 0.42 -0.1 583,602 - SM_b20558 0.42 -0.5 583,602 - SM_b20558 0.42 -0.2 583,663 - SM_b20558 0.57 +0.5 583,663 - SM_b20558 0.57 -1.4 583,663 - SM_b20558 0.57 +0.3 583,663 - SM_b20558 0.57 -0.5
Or see this region's nucleotide sequence