Strain Fitness in Paraburkholderia graminis OAS925 around ABIE53_005729

Experiment: R2A with Tricalcium phosphate 0.5 g/L

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Tricalcium phosphate 0.5 g/L
2,026,759	+				+0.9
2,026,759	+				-1.1
2,026,759	+				+0.9
2,026,759	+				+1.9
2,026,759	+				+0.7
2,026,759	+				-0.9
2,026,759	+				-2.4
2,026,760	-				+0.9
2,026,760	-				-0.1
2,026,760	-				+0.9
2,026,837	+				+2.5
2,026,838	-				-0.2
2,026,846	-				+0.9
2,026,846	-				+0.9
2,026,857	-				+0.2
2,026,857	-				+0.3
2,026,876	-				-0.2
2,026,890	-				-0.7
2,026,890	-				-0.1
2,026,890	-				+0.3
2,026,890	-				+1.3
2,026,927	+				+0.9
2,026,927	+				+0.7
2,026,927	+				+0.7
2,026,927	+				-0.7
2,027,005	+				-1.3
2,027,413	+		ABIE53_005728	0.60	+0.4
2,027,414	-		ABIE53_005728	0.60	+0.9
2,027,461	+		ABIE53_005728	0.66	+2.5
2,027,461	+		ABIE53_005728	0.66	+1.9
2,027,462	-		ABIE53_005728	0.66	+1.3
2,027,576	+		ABIE53_005728	0.81	-0.1
2,027,644	+		ABIE53_005728	0.89	+2.5
2,027,661	+				+2.3
2,028,104	+		ABIE53_005729	0.21	+0.3
2,028,105	-		ABIE53_005729	0.21	+0.1
2,028,105	-		ABIE53_005729	0.21	-0.4
2,028,285	+		ABIE53_005729	0.32	+0.9
2,028,285	+		ABIE53_005729	0.32	+0.2
2,028,286	-		ABIE53_005729	0.32	+2.5
2,028,286	-		ABIE53_005729	0.32	-0.0
2,028,286	-		ABIE53_005729	0.32	+0.5
2,028,393	+		ABIE53_005729	0.38	-1.1
2,028,393	+		ABIE53_005729	0.38	-0.1
2,028,393	+		ABIE53_005729	0.38	+0.9
2,028,393	+		ABIE53_005729	0.38	-0.9
2,028,394	-		ABIE53_005729	0.38	+1.9
2,028,394	-		ABIE53_005729	0.38	+0.7
2,028,394	-		ABIE53_005729	0.38	-0.7
2,028,394	-		ABIE53_005729	0.38	-3.5
2,028,394	-		ABIE53_005729	0.38	+1.7
2,028,394	-		ABIE53_005729	0.38	+2.9
2,028,394	-		ABIE53_005729	0.38	-0.5
2,028,394	-		ABIE53_005729	0.38	+0.9
2,028,394	-		ABIE53_005729	0.38	-0.5
2,028,696	+		ABIE53_005729	0.55	-0.7
2,028,696	+		ABIE53_005729	0.55	+1.4
2,028,697	-		ABIE53_005729	0.55	-0.5
2,028,697	-		ABIE53_005729	0.55	+0.3
2,028,697	-		ABIE53_005729	0.55	+0.2
2,028,697	-		ABIE53_005729	0.55	+1.5
2,028,994	+		ABIE53_005729	0.72	-1.7
2,028,994	+		ABIE53_005729	0.72	+2.5
2,028,995	-		ABIE53_005729	0.72	-0.2
2,028,995	-		ABIE53_005729	0.72	+0.7
2,028,995	-		ABIE53_005729	0.72	-2.7
2,029,005	+		ABIE53_005729	0.73	-1.1
2,029,005	+		ABIE53_005729	0.73	+0.5
2,029,006	-		ABIE53_005729	0.73	-0.1
2,029,006	-		ABIE53_005729	0.73	+0.3
2,029,006	-		ABIE53_005729	0.73	-1.9
2,029,014	+		ABIE53_005729	0.73	-0.1
2,029,014	+		ABIE53_005729	0.73	-0.6
2,029,014	+		ABIE53_005729	0.73	-0.8
2,029,014	+		ABIE53_005729	0.73	-0.6
2,029,014	+		ABIE53_005729	0.73	+1.5
2,029,014	+		ABIE53_005729	0.73	-0.1
2,029,014	+		ABIE53_005729	0.73	+0.3
2,029,014	+		ABIE53_005729	0.73	-0.3
2,029,014	+		ABIE53_005729	0.73	+0.3
2,029,014	+		ABIE53_005729	0.73	+0.8
2,029,014	+		ABIE53_005729	0.73	-0.7
2,029,015	-		ABIE53_005729	0.73	+0.3
2,029,015	-		ABIE53_005729	0.73	-0.7
2,029,015	-		ABIE53_005729	0.73	+0.6
2,029,015	-		ABIE53_005729	0.73	-2.7
2,029,015	-		ABIE53_005729	0.73	+0.9
2,029,015	-		ABIE53_005729	0.73	+1.5
2,029,015	-		ABIE53_005729	0.73	-0.2
2,029,015	-		ABIE53_005729	0.73	-0.3
2,029,015	-		ABIE53_005729	0.73	+0.1
2,029,015	-		ABIE53_005729	0.73	+0.7
2,029,015	-		ABIE53_005729	0.73	-0.8
2,029,114	+		ABIE53_005729	0.79	+4.1
2,029,114	+		ABIE53_005729	0.79	+0.3
2,029,114	+		ABIE53_005729	0.79	+0.9
2,029,115	-		ABIE53_005729	0.79	-1.7
2,029,115	-		ABIE53_005729	0.79	+1.5
2,029,115	-		ABIE53_005729	0.79	+0.9
2,029,334	+				+0.6
2,029,518	-				-0.7
2,029,569	+				-0.9
2,029,569	+				+1.2
2,029,570	-				+0.6
2,029,570	-				+4.6
2,029,570	-				+0.6
2,029,570	-				-0.3
2,029,576	+				-0.7
2,029,577	-				-0.9
2,029,577	-				+0.3
2,029,621	+				+0.3
2,029,780	+		ABIE53_005730	0.20	+0.2
2,029,780	+		ABIE53_005730	0.20	+1.3
2,029,780	+		ABIE53_005730	0.20	+1.9
2,029,780	+		ABIE53_005730	0.20	+0.9
2,029,780	+		ABIE53_005730	0.20	-0.1
2,029,780	+		ABIE53_005730	0.20	-0.9
2,029,781	-		ABIE53_005730	0.20	-0.5
2,029,781	-		ABIE53_005730	0.20	+1.2
2,029,781	-		ABIE53_005730	0.20	+0.3
2,029,781	-		ABIE53_005730	0.20	+0.3
2,029,781	-		ABIE53_005730	0.20	+0.4
2,029,781	-		ABIE53_005730	0.20	-0.7
2,029,781	-		ABIE53_005730	0.20	+0.7
2,029,781	-		ABIE53_005730	0.20	+2.5
2,029,781	-		ABIE53_005730	0.20	+0.9
2,029,784	+		ABIE53_005730	0.20	-0.9
2,029,784	+		ABIE53_005730	0.20	-0.6
2,029,784	+		ABIE53_005730	0.20	+1.3
2,029,784	+		ABIE53_005730	0.20	+0.4
2,029,784	+		ABIE53_005730	0.20	-0.1
2,029,784	+		ABIE53_005730	0.20	+0.6
2,029,785	-		ABIE53_005730	0.20	-1.7
2,029,785	-		ABIE53_005730	0.20	+0.0
2,029,785	-		ABIE53_005730	0.20	+0.7
2,029,785	-		ABIE53_005730	0.20	-0.2
2,029,785	-		ABIE53_005730	0.20	-1.5
2,030,032	+		ABIE53_005730	0.44	+0.5
2,030,032	+		ABIE53_005730	0.44	+3.0
2,030,033	-		ABIE53_005730	0.44	-1.1
2,030,033	-		ABIE53_005730	0.44	-1.7
2,030,033	-		ABIE53_005730	0.44	-0.2
2,030,033	-		ABIE53_005730	0.44	-1.4
2,030,033	-		ABIE53_005730	0.44	+0.3
2,030,033	-		ABIE53_005730	0.44	-1.1
2,030,033	-		ABIE53_005730	0.44	-2.1
2,030,033	-		ABIE53_005730	0.44	+0.9
2,030,081	-		ABIE53_005730	0.49	-0.5
2,030,167	+		ABIE53_005730	0.57	-1.1
2,030,182	+		ABIE53_005730	0.58	-1.1
2,030,182	+		ABIE53_005730	0.58	-2.8
2,030,182	+		ABIE53_005730	0.58	-1.1
2,030,182	+		ABIE53_005730	0.58	+0.9
2,030,182	+		ABIE53_005730	0.58	+0.9
2,030,183	-		ABIE53_005730	0.59	-1.2
2,030,192	-		ABIE53_005730	0.59	-0.2
2,030,455	+		ABIE53_005730	0.85	+0.9