Strain Fitness in Paraburkholderia graminis OAS925 around ABIE53_005373

Experiment: R2A with Tricalcium phosphate 0.5 g/L

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Tricalcium phosphate 0.5 g/L
1,642,248	+		ABIE53_005370	0.88	+0.2
1,642,374	+				+0.8
1,642,375	-				-0.8
1,642,628	+				-2.2
1,642,629	-				-2.4
1,642,685	+				+0.8
1,642,685	+				+0.8
1,642,685	+				+0.0
1,642,686	-				-1.7
1,642,686	-				+1.8
1,642,686	-				+0.8
1,642,701	+				-0.8
1,642,701	+				+1.1
1,642,783	-				-1.6
1,642,791	+				-0.2
1,642,791	+				-2.0
1,642,791	+				-0.1
1,642,792	-				+0.8
1,642,792	-				+0.8
1,642,792	-				+0.8
1,642,792	-				-1.2
1,642,793	+				-0.2
1,642,793	+				-0.4
1,642,794	-		ABIE53_005372	0.10	+1.4
1,642,858	-		ABIE53_005372	0.27	+0.8
1,642,969	-		ABIE53_005372	0.55	+0.8
1,643,068	-		ABIE53_005372	0.81	-1.2
1,643,139	+				+0.8
1,643,139	+				+1.8
1,643,140	-				-1.7
1,643,167	+				+0.8
1,643,167	+				-0.8
1,643,167	+				-2.9
1,643,168	-				-1.6
1,643,168	-				-1.2
1,643,239	+				-2.2
1,643,239	+				-1.8
1,643,240	-				+0.8
1,643,306	+				+0.8
1,643,307	-				-0.2
1,643,466	-		ABIE53_005373	0.21	+1.3
1,643,671	+		ABIE53_005373	0.35	-2.7
1,643,672	-		ABIE53_005373	0.35	+0.8
1,643,690	-		ABIE53_005373	0.37	+0.8
1,643,690	-		ABIE53_005373	0.37	+0.8
1,643,690	-		ABIE53_005373	0.37	+0.8
1,643,690	-		ABIE53_005373	0.37	-3.6
1,643,795	-		ABIE53_005373	0.44	-0.5
1,644,037	-		ABIE53_005373	0.61	-0.2
1,644,075	-		ABIE53_005373	0.64	-1.6
1,644,075	-		ABIE53_005373	0.64	+0.8
1,644,135	+		ABIE53_005373	0.68	-0.0
1,644,146	+		ABIE53_005373	0.68	-2.1
1,644,146	+		ABIE53_005373	0.68	+1.8
1,644,147	-		ABIE53_005373	0.69	+0.8
1,644,147	-		ABIE53_005373	0.69	+2.3
1,644,147	-		ABIE53_005373	0.69	+2.1
1,644,147	-		ABIE53_005373	0.69	+1.3
1,644,147	-		ABIE53_005373	0.69	-2.4
1,644,259	+		ABIE53_005373	0.76	+0.5
1,644,259	+		ABIE53_005373	0.76	-1.6
1,644,260	-		ABIE53_005373	0.76	-0.2
1,644,260	-		ABIE53_005373	0.76	-0.0
1,644,380	-		ABIE53_005373	0.85	-1.5
1,644,411	+		ABIE53_005373	0.87	-0.2
1,644,411	+		ABIE53_005373	0.87	-1.2
1,644,411	+		ABIE53_005373	0.87	+0.8
1,644,411	+		ABIE53_005373	0.87	-0.6
1,644,412	-		ABIE53_005373	0.87	-2.6
1,644,412	-		ABIE53_005373	0.87	+2.3
1,644,412	-		ABIE53_005373	0.87	-0.2
1,644,412	-		ABIE53_005373	0.87	+0.8
1,644,412	-		ABIE53_005373	0.87	+0.8
1,644,412	-		ABIE53_005373	0.87	-2.0
1,644,416	-		ABIE53_005373	0.87	+0.3
1,644,487	+				+0.8
1,644,488	-				+0.8
1,644,488	-				+0.8
1,644,488	-				-2.4
1,644,504	-				-1.9
1,644,610	+				-1.8
1,644,611	-				+0.8
1,644,749	-		ABIE53_005374	0.12	-0.4
1,644,749	-		ABIE53_005374	0.12	-1.8
1,644,845	-		ABIE53_005374	0.21	+0.2
1,644,899	+		ABIE53_005374	0.25	+0.8
1,644,900	-		ABIE53_005374	0.25	+0.8
1,644,900	-		ABIE53_005374	0.25	-0.2
1,644,985	-		ABIE53_005374	0.33	+0.8
1,644,985	-		ABIE53_005374	0.33	+0.8
1,645,006	-		ABIE53_005374	0.35	-0.2
1,645,039	+		ABIE53_005374	0.38	+0.8
1,645,039	+		ABIE53_005374	0.38	-1.2
1,645,039	+		ABIE53_005374	0.38	-1.3
1,645,040	-		ABIE53_005374	0.38	+1.1
1,645,040	-		ABIE53_005374	0.38	-1.8
1,645,198	+		ABIE53_005374	0.52	+1.8
1,645,205	+		ABIE53_005374	0.52	+2.8
1,645,222	+		ABIE53_005374	0.54	-0.2
1,645,222	+		ABIE53_005374	0.54	-0.2
1,645,223	-		ABIE53_005374	0.54	-0.2
1,645,223	-		ABIE53_005374	0.54	+0.8
1,645,223	-		ABIE53_005374	0.54	+0.8
1,645,428	+		ABIE53_005374	0.72	-1.8
1,645,501	-		ABIE53_005374	0.78	+0.8
1,645,514	-		ABIE53_005374	0.79	+1.8