Strain Fitness in Paraburkholderia graminis OAS925 around ABIE53_001850

Experiment: R2A with Tricalcium phosphate 0.5 g/L

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Tricalcium phosphate 0.5 g/L
2,090,571	-		ABIE53_001849	0.63	-1.2
2,090,571	-		ABIE53_001849	0.63	-0.9
2,090,572	+		ABIE53_001849	0.63	-4.0
2,090,572	+		ABIE53_001849	0.63	-0.9
2,090,573	-		ABIE53_001849	0.63	+0.3
2,090,915	+				-1.0
2,091,001	+				-2.3
2,091,257	-				+1.7
2,091,268	+				+0.1
2,091,268	+				-0.9
2,091,271	-				-2.8
2,091,276	+				+0.2
2,091,276	+				+0.7
2,091,277	-				+2.3
2,091,401	-				-0.3
2,091,401	-				-1.2
2,091,401	-				-1.6
2,091,401	-				-2.1
2,091,436	-				-0.6
2,091,436	-				-1.5
2,091,656	+				+0.7
2,091,686	+		ABIE53_001850	0.11	-0.6
2,091,687	-		ABIE53_001850	0.11	+1.3
2,091,875	+		ABIE53_001850	0.24	+2.3
2,091,876	-		ABIE53_001850	0.24	-1.2
2,091,876	-		ABIE53_001850	0.24	-0.6
2,091,878	+		ABIE53_001850	0.25	+0.7
2,091,879	-		ABIE53_001850	0.25	+1.7
2,091,944	+		ABIE53_001850	0.29	-0.9
2,091,945	-		ABIE53_001850	0.29	+1.7
2,091,945	-		ABIE53_001850	0.29	-0.9
2,091,964	+		ABIE53_001850	0.31	-2.4
2,091,964	+		ABIE53_001850	0.31	+0.0
2,091,965	-		ABIE53_001850	0.31	-0.7
2,092,109	-		ABIE53_001850	0.41	-1.3
2,092,109	-		ABIE53_001850	0.41	+0.7
2,092,118	+		ABIE53_001850	0.42	+0.7
2,092,118	+		ABIE53_001850	0.42	-0.5
2,092,118	+		ABIE53_001850	0.42	-1.0
2,092,119	-		ABIE53_001850	0.42	-1.1
2,092,119	-		ABIE53_001850	0.42	+1.5
2,092,119	-		ABIE53_001850	0.42	-0.6
2,092,119	-		ABIE53_001850	0.42	-1.6
2,092,120	+		ABIE53_001850	0.42	-1.3
2,092,162	+		ABIE53_001850	0.45	+1.7
2,092,163	-		ABIE53_001850	0.45	+1.7
2,092,433	+		ABIE53_001850	0.65	-1.2
2,092,433	+		ABIE53_001850	0.65	+1.7
2,092,433	+		ABIE53_001850	0.65	-0.0
2,092,434	-		ABIE53_001850	0.65	-0.3
2,092,562	+		ABIE53_001850	0.74	+0.1
2,092,563	-		ABIE53_001850	0.74	+0.7
2,092,730	-		ABIE53_001850	0.86	+0.7
2,092,730	-		ABIE53_001850	0.86	+0.7
2,092,730	-		ABIE53_001850	0.86	+1.7
2,092,730	-		ABIE53_001850	0.86	+0.7
2,092,736	+		ABIE53_001850	0.87	+2.3
2,092,736	+		ABIE53_001850	0.87	-0.1
2,092,736	+		ABIE53_001850	0.87	+1.3
2,092,736	+		ABIE53_001850	0.87	+0.7
2,092,736	+		ABIE53_001850	0.87	+3.0
2,092,737	-		ABIE53_001850	0.87	+0.9
2,092,737	-		ABIE53_001850	0.87	+0.1
2,092,965	-				+2.3
2,092,993	+				-0.9
2,092,994	-				+0.0
2,092,994	-				-1.0
2,093,002	+				-0.9
2,093,037	+				-1.1
2,093,037	+				+1.3
2,093,038	-				-1.1
2,093,258	+		ABIE53_001851	0.18	+0.7
2,093,258	+		ABIE53_001851	0.18	-0.3
2,093,258	+		ABIE53_001851	0.18	+0.7
2,093,258	+		ABIE53_001851	0.18	-1.6
2,093,259	-		ABIE53_001851	0.18	-3.0
2,093,259	-		ABIE53_001851	0.18	-0.5
2,093,259	-		ABIE53_001851	0.18	-2.5
2,093,259	-		ABIE53_001851	0.18	+0.7
2,093,263	-		ABIE53_001851	0.18	-0.9
2,093,263	-		ABIE53_001851	0.18	+2.7
2,093,263	-		ABIE53_001851	0.18	+2.3
2,093,375	+		ABIE53_001851	0.24	+0.1
2,093,394	+		ABIE53_001851	0.25	+0.7
2,093,394	+		ABIE53_001851	0.25	-0.8
2,093,469	+		ABIE53_001851	0.29	-1.3
2,093,469	+		ABIE53_001851	0.29	+2.3
2,093,470	-		ABIE53_001851	0.29	-0.3
2,093,470	-		ABIE53_001851	0.29	-0.3
2,093,803	-		ABIE53_001851	0.46	+0.7