Experiment: KB with Sclareolide 10 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Psyr_4063 and Psyr_4064 are separated by 61 nucleotides Psyr_4064 and Psyr_4065 are separated by 16 nucleotides
Psyr_4063: Psyr_4063 - Protein of unknown function DUF1111, at 4,847,035 to 4,848,462
_4063
Psyr_4064: Psyr_4064 - lipoprotein, putative, at 4,848,524 to 4,849,588
_4064
Psyr_4065: Psyr_4065 - Protein of unknown function DUF1513, at 4,849,605 to 4,850,711
_4065
Position (kb) 4848
4849
4850 Strain fitness (log2 ratio) -3
-2
-1
0
1
2
3 at 4847.543 kb on - strand, within Psyr_4063 at 4847.543 kb on - strand, within Psyr_4063 at 4848.016 kb on + strand, within Psyr_4063 at 4848.016 kb on + strand, within Psyr_4063 at 4848.016 kb on + strand, within Psyr_4063 at 4848.016 kb on + strand, within Psyr_4063 at 4848.017 kb on - strand, within Psyr_4063 at 4848.017 kb on - strand, within Psyr_4063 at 4848.017 kb on - strand, within Psyr_4063 at 4848.017 kb on - strand, within Psyr_4063 at 4848.511 kb on + strand at 4848.511 kb on + strand at 4848.512 kb on - strand at 4848.644 kb on + strand, within Psyr_4064 at 4848.644 kb on + strand, within Psyr_4064 at 4848.644 kb on + strand, within Psyr_4064 at 4848.644 kb on + strand, within Psyr_4064 at 4848.645 kb on - strand, within Psyr_4064 at 4848.645 kb on - strand, within Psyr_4064 at 4848.819 kb on + strand, within Psyr_4064 at 4848.819 kb on + strand, within Psyr_4064 at 4848.820 kb on - strand, within Psyr_4064 at 4848.820 kb on - strand, within Psyr_4064 at 4848.820 kb on - strand, within Psyr_4064 at 4848.820 kb on - strand, within Psyr_4064 at 4848.944 kb on + strand, within Psyr_4064 at 4848.950 kb on + strand, within Psyr_4064 at 4848.950 kb on + strand, within Psyr_4064 at 4848.950 kb on + strand, within Psyr_4064 at 4848.950 kb on + strand, within Psyr_4064 at 4848.950 kb on + strand, within Psyr_4064 at 4848.950 kb on + strand, within Psyr_4064 at 4848.950 kb on + strand, within Psyr_4064 at 4848.950 kb on + strand, within Psyr_4064 at 4848.950 kb on + strand, within Psyr_4064 at 4848.950 kb on + strand, within Psyr_4064 at 4848.950 kb on + strand, within Psyr_4064 at 4848.950 kb on + strand, within Psyr_4064 at 4848.951 kb on - strand, within Psyr_4064 at 4848.951 kb on - strand, within Psyr_4064 at 4848.951 kb on - strand, within Psyr_4064 at 4848.951 kb on - strand, within Psyr_4064 at 4848.951 kb on - strand, within Psyr_4064 at 4848.951 kb on - strand, within Psyr_4064 at 4848.951 kb on - strand, within Psyr_4064 at 4848.951 kb on - strand, within Psyr_4064 at 4848.951 kb on - strand, within Psyr_4064 at 4848.951 kb on - strand, within Psyr_4064 at 4848.951 kb on - strand, within Psyr_4064 at 4848.951 kb on - strand, within Psyr_4064 at 4848.951 kb on - strand, within Psyr_4064 at 4849.597 kb on + strand at 4849.597 kb on + strand at 4849.597 kb on + strand at 4849.597 kb on + strand at 4849.597 kb on + strand at 4849.597 kb on + strand at 4849.597 kb on + strand at 4849.598 kb on - strand at 4849.598 kb on - strand at 4849.598 kb on - strand at 4849.598 kb on - strand at 4849.598 kb on - strand at 4849.598 kb on - strand at 4849.598 kb on - strand at 4849.598 kb on - strand at 4849.598 kb on - strand at 4849.598 kb on - strand at 4849.598 kb on - strand at 4849.741 kb on - strand, within Psyr_4065 at 4849.774 kb on + strand, within Psyr_4065 at 4849.862 kb on + strand, within Psyr_4065 at 4849.862 kb on + strand, within Psyr_4065 at 4849.863 kb on - strand, within Psyr_4065 at 4849.872 kb on + strand, within Psyr_4065 at 4849.872 kb on + strand, within Psyr_4065 at 4849.872 kb on + strand, within Psyr_4065 at 4849.873 kb on - strand, within Psyr_4065 at 4849.938 kb on + strand, within Psyr_4065 at 4849.939 kb on - strand, within Psyr_4065 at 4849.939 kb on - strand, within Psyr_4065 at 4849.978 kb on - strand, within Psyr_4065 at 4850.017 kb on + strand, within Psyr_4065 at 4850.269 kb on + strand, within Psyr_4065 at 4850.427 kb on + strand, within Psyr_4065 at 4850.428 kb on - strand, within Psyr_4065 at 4850.428 kb on - strand, within Psyr_4065 at 4850.428 kb on - strand, within Psyr_4065 at 4850.428 kb on - strand, within Psyr_4065 at 4850.446 kb on + strand, within Psyr_4065 at 4850.447 kb on - strand, within Psyr_4065
Per-strain Table
Position Strand Gene LocusTag Fraction KB with Sclareolide 10 mM remove 4,847,543 - Psyr_4063 0.36 +1.0 4,847,543 - Psyr_4063 0.36 +1.2 4,848,016 + Psyr_4063 0.69 -0.4 4,848,016 + Psyr_4063 0.69 -0.1 4,848,016 + Psyr_4063 0.69 +2.4 4,848,016 + Psyr_4063 0.69 -0.3 4,848,017 - Psyr_4063 0.69 +0.3 4,848,017 - Psyr_4063 0.69 +0.6 4,848,017 - Psyr_4063 0.69 +2.9 4,848,017 - Psyr_4063 0.69 -1.3 4,848,511 + -2.9 4,848,511 + -0.3 4,848,512 - -1.8 4,848,644 + Psyr_4064 0.11 +0.3 4,848,644 + Psyr_4064 0.11 -0.9 4,848,644 + Psyr_4064 0.11 +0.1 4,848,644 + Psyr_4064 0.11 +0.3 4,848,645 - Psyr_4064 0.11 -0.7 4,848,645 - Psyr_4064 0.11 +1.1 4,848,819 + Psyr_4064 0.28 -2.2 4,848,819 + Psyr_4064 0.28 -0.3 4,848,820 - Psyr_4064 0.28 -0.7 4,848,820 - Psyr_4064 0.28 -0.7 4,848,820 - Psyr_4064 0.28 +0.6 4,848,820 - Psyr_4064 0.28 -0.5 4,848,944 + Psyr_4064 0.39 -0.4 4,848,950 + Psyr_4064 0.40 -0.9 4,848,950 + Psyr_4064 0.40 +0.8 4,848,950 + Psyr_4064 0.40 +0.5 4,848,950 + Psyr_4064 0.40 +0.3 4,848,950 + Psyr_4064 0.40 -1.6 4,848,950 + Psyr_4064 0.40 +0.9 4,848,950 + Psyr_4064 0.40 -0.7 4,848,950 + Psyr_4064 0.40 -1.1 4,848,950 + Psyr_4064 0.40 -0.7 4,848,950 + Psyr_4064 0.40 +0.4 4,848,950 + Psyr_4064 0.40 -1.8 4,848,950 + Psyr_4064 0.40 -1.6 4,848,951 - Psyr_4064 0.40 -0.4 4,848,951 - Psyr_4064 0.40 -0.4 4,848,951 - Psyr_4064 0.40 -1.2 4,848,951 - Psyr_4064 0.40 -2.5 4,848,951 - Psyr_4064 0.40 -0.3 4,848,951 - Psyr_4064 0.40 -0.7 4,848,951 - Psyr_4064 0.40 -1.4 4,848,951 - Psyr_4064 0.40 -3.2 4,848,951 - Psyr_4064 0.40 -1.3 4,848,951 - Psyr_4064 0.40 -0.3 4,848,951 - Psyr_4064 0.40 -1.0 4,848,951 - Psyr_4064 0.40 -0.9 4,848,951 - Psyr_4064 0.40 +0.4 4,849,597 + -0.3 4,849,597 + -0.4 4,849,597 + -1.9 4,849,597 + -0.3 4,849,597 + +1.0 4,849,597 + +2.4 4,849,597 + -0.5 4,849,598 - +2.4 4,849,598 - -1.3 4,849,598 - +1.1 4,849,598 - +1.0 4,849,598 - -1.0 4,849,598 - +0.2 4,849,598 - -0.8 4,849,598 - +0.9 4,849,598 - -0.9 4,849,598 - +3.0 4,849,598 - +1.4 4,849,741 - Psyr_4065 0.12 -1.5 4,849,774 + Psyr_4065 0.15 +0.6 4,849,862 + Psyr_4065 0.23 -0.4 4,849,862 + Psyr_4065 0.23 +0.5 4,849,863 - Psyr_4065 0.23 -1.1 4,849,872 + Psyr_4065 0.24 +0.0 4,849,872 + Psyr_4065 0.24 +0.4 4,849,872 + Psyr_4065 0.24 +1.7 4,849,873 - Psyr_4065 0.24 -0.2 4,849,938 + Psyr_4065 0.30 +0.9 4,849,939 - Psyr_4065 0.30 +0.9 4,849,939 - Psyr_4065 0.30 -0.4 4,849,978 - Psyr_4065 0.34 -0.4 4,850,017 + Psyr_4065 0.37 -1.5 4,850,269 + Psyr_4065 0.60 -1.1 4,850,427 + Psyr_4065 0.74 +1.3 4,850,428 - Psyr_4065 0.74 -0.9 4,850,428 - Psyr_4065 0.74 +0.2 4,850,428 - Psyr_4065 0.74 -0.1 4,850,428 - Psyr_4065 0.74 +0.1 4,850,446 + Psyr_4065 0.76 -1.5 4,850,447 - Psyr_4065 0.76 +0.7
Or see this region's nucleotide sequence