Strain Fitness in Pseudomonas syringae pv. syringae B728a around Psyr_3408

Experiment: KB with Sclareolide 10 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	KB with Sclareolide 10 mM
4,068,023	-				+0.2
4,068,028	+				-0.3
4,068,042	+				+0.7
4,068,108	-				-2.6
4,068,237	-				-0.1
4,068,301	+				+0.7
4,068,301	+				+0.7
4,068,301	+				-2.0
4,068,301	+				-0.2
4,068,302	-				-0.5
4,068,302	-				-2.7
4,068,302	-				+1.7
4,068,302	-				+0.5
4,068,312	+				-1.4
4,068,361	+				+0.7
4,068,370	+				-1.1
4,068,410	-				-2.1
4,068,524	+		Psyr_3407	0.29	+0.7
4,068,605	+		Psyr_3407	0.44	+0.4
4,068,606	-		Psyr_3407	0.45	-0.6
4,068,614	+		Psyr_3407	0.46	+2.7
4,068,615	-		Psyr_3407	0.46	+0.3
4,068,721	+		Psyr_3407	0.66	+1.5
4,068,721	+		Psyr_3407	0.66	-1.4
4,068,721	+		Psyr_3407	0.66	-0.4
4,068,722	-		Psyr_3407	0.66	-0.8
4,068,722	-		Psyr_3407	0.66	-0.5
4,068,722	-		Psyr_3407	0.66	+0.7
4,068,722	-		Psyr_3407	0.66	-0.8
4,068,734	+		Psyr_3407	0.68	-1.8
4,068,734	+		Psyr_3407	0.68	-1.0
4,068,741	+		Psyr_3407	0.69	-1.2
4,068,756	+		Psyr_3407	0.72	-1.3
4,068,783	+		Psyr_3407	0.77	-2.7
4,068,838	+		Psyr_3407	0.87	-1.8
4,068,906	+				+0.1
4,068,906	+				+1.1
4,069,036	+				+0.5
4,069,036	+				-0.8
4,069,037	-				-2.1
4,069,037	-				-1.1
4,069,037	-				+2.1
4,069,037	-				-0.1
4,069,037	-				-0.9
4,069,191	+		Psyr_3408	0.10	-0.5
4,069,191	+		Psyr_3408	0.10	-1.0
4,069,191	+		Psyr_3408	0.10	-0.2
4,069,191	+		Psyr_3408	0.10	+1.4
4,069,191	+		Psyr_3408	0.10	-0.3
4,069,191	+		Psyr_3408	0.10	+1.5
4,069,191	+		Psyr_3408	0.10	+0.5
4,069,191	+		Psyr_3408	0.10	+0.1
4,069,192	-		Psyr_3408	0.10	-0.0
4,069,192	-		Psyr_3408	0.10	+0.3
4,069,192	-		Psyr_3408	0.10	-1.3
4,069,192	-		Psyr_3408	0.10	-0.1
4,069,192	-		Psyr_3408	0.10	+2.0
4,069,192	-		Psyr_3408	0.10	+1.0
4,069,192	-		Psyr_3408	0.10	-0.1
4,069,192	-		Psyr_3408	0.10	+0.5
4,069,192	-		Psyr_3408	0.10	-1.4
4,069,195	+		Psyr_3408	0.10	-0.6
4,069,195	+		Psyr_3408	0.10	+0.0
4,069,195	+		Psyr_3408	0.10	+0.3
4,069,196	-		Psyr_3408	0.11	+2.9
4,069,196	-		Psyr_3408	0.11	+1.1
4,069,196	-		Psyr_3408	0.11	+1.1
4,069,196	-		Psyr_3408	0.11	+0.4
4,069,196	-		Psyr_3408	0.11	+1.4
4,069,196	-		Psyr_3408	0.11	+0.9
4,069,366	+		Psyr_3408	0.18	+0.8
4,069,413	+		Psyr_3408	0.21	+0.7
4,069,429	+		Psyr_3408	0.21	-0.8
4,069,430	-		Psyr_3408	0.22	+0.1
4,069,430	-		Psyr_3408	0.22	+0.3
4,069,513	+		Psyr_3408	0.25	-0.4
4,069,513	+		Psyr_3408	0.25	-0.3
4,069,513	+		Psyr_3408	0.25	-0.3
4,069,513	+		Psyr_3408	0.25	-0.7
4,069,513	+		Psyr_3408	0.25	-0.5
4,069,513	+		Psyr_3408	0.25	+0.5
4,069,513	+		Psyr_3408	0.25	-0.2
4,069,514	-		Psyr_3408	0.25	+0.2
4,069,514	-		Psyr_3408	0.25	+1.7
4,069,514	-		Psyr_3408	0.25	+0.5
4,069,514	-		Psyr_3408	0.25	+2.3
4,069,514	-		Psyr_3408	0.25	+0.7
4,069,516	+		Psyr_3408	0.26	+0.3
4,069,543	+		Psyr_3408	0.27	+0.9
4,069,555	+		Psyr_3408	0.27	+0.4
4,069,555	+		Psyr_3408	0.27	-2.2
4,069,555	+		Psyr_3408	0.27	+0.9
4,069,555	+		Psyr_3408	0.27	-0.3
4,069,555	+		Psyr_3408	0.27	+0.5
4,069,556	-		Psyr_3408	0.27	-0.9
4,069,558	+		Psyr_3408	0.28	-0.3
4,069,558	+		Psyr_3408	0.28	+0.3
4,069,558	+		Psyr_3408	0.28	-1.4
4,069,558	+		Psyr_3408	0.28	-0.3
4,069,558	+		Psyr_3408	0.28	+1.7
4,069,558	+		Psyr_3408	0.28	+1.0
4,069,558	+		Psyr_3408	0.28	-0.1
4,069,558	+		Psyr_3408	0.28	-0.1
4,069,558	+		Psyr_3408	0.28	-0.8
4,069,558	+		Psyr_3408	0.28	-0.2
4,069,558	+		Psyr_3408	0.28	+0.2
4,069,559	-		Psyr_3408	0.28	+2.3
4,069,559	-		Psyr_3408	0.28	-0.5
4,069,559	-		Psyr_3408	0.28	-2.0
4,069,559	-		Psyr_3408	0.28	+0.5
4,069,559	-		Psyr_3408	0.28	-2.5
4,069,559	-		Psyr_3408	0.28	-0.7
4,069,559	-		Psyr_3408	0.28	+0.2
4,069,559	-		Psyr_3408	0.28	-0.1
4,069,559	-		Psyr_3408	0.28	-0.3
4,069,559	-		Psyr_3408	0.28	+2.3
4,069,559	-		Psyr_3408	0.28	-0.2
4,069,559	-		Psyr_3408	0.28	-1.8
4,069,571	+		Psyr_3408	0.28	-0.4
4,069,808	+		Psyr_3408	0.39	+0.2
4,069,808	+		Psyr_3408	0.39	-1.3
4,069,846	+		Psyr_3408	0.41	-1.1
4,069,846	+		Psyr_3408	0.41	+0.1
4,069,846	+		Psyr_3408	0.41	-0.1
4,069,846	+		Psyr_3408	0.41	-1.4
4,069,846	+		Psyr_3408	0.41	+1.0
4,069,879	-		Psyr_3408	0.43	+2.7
4,069,879	-		Psyr_3408	0.43	+0.5
4,069,933	+		Psyr_3408	0.45	+0.7
4,069,934	-		Psyr_3408	0.45	+0.4
4,069,934	-		Psyr_3408	0.45	-0.3
4,069,934	-		Psyr_3408	0.45	-0.2
4,069,934	-		Psyr_3408	0.45	-0.6
4,069,934	-		Psyr_3408	0.45	+0.1
4,069,998	-		Psyr_3408	0.48	+2.6
4,070,494	-		Psyr_3408	0.71	-0.4
4,070,495	+		Psyr_3408	0.72	-0.3
4,070,495	+		Psyr_3408	0.72	-0.3
4,070,496	-		Psyr_3408	0.72	+1.7
4,070,572	+		Psyr_3408	0.75	-0.4
4,070,572	+		Psyr_3408	0.75	+0.3
4,070,623	-		Psyr_3408	0.78	+3.3
4,070,643	+		Psyr_3408	0.78	+0.5
4,070,643	+		Psyr_3408	0.78	+0.7
4,070,643	+		Psyr_3408	0.78	-0.9
4,070,644	-		Psyr_3408	0.78	-2.8
4,070,644	-		Psyr_3408	0.78	-2.3
4,070,644	-		Psyr_3408	0.78	+1.1
4,070,644	-		Psyr_3408	0.78	-0.3
4,070,644	-		Psyr_3408	0.78	-0.9
4,070,644	-		Psyr_3408	0.78	+1.3
4,070,644	-		Psyr_3408	0.78	+0.2
4,070,644	-		Psyr_3408	0.78	-0.5
4,070,647	+		Psyr_3408	0.79	-0.2
4,070,647	+		Psyr_3408	0.79	+1.3
4,070,647	+		Psyr_3408	0.79	-1.5
4,070,648	-		Psyr_3408	0.79	+0.7
4,070,648	-		Psyr_3408	0.79	+0.7
4,070,708	+		Psyr_3408	0.82	-1.1
4,070,741	+		Psyr_3408	0.83	+0.7
4,070,742	-		Psyr_3408	0.83	-1.2
4,070,742	-		Psyr_3408	0.83	+0.1
4,070,883	-		Psyr_3408	0.90	+1.0
4,070,944	-				-2.4
4,070,973	-				-0.9
4,071,018	+				-1.1
4,071,025	+				-1.1
4,071,025	+				-0.9
4,071,026	-				-0.8
4,071,026	-				-0.9
4,071,026	-				+0.5
4,071,029	+				-1.1
4,071,030	-				-0.7
4,071,030	-				-1.6
4,071,055	+				+0.3
4,071,055	+				+0.0
4,071,055	+				+0.1
4,071,056	-				-0.8
4,071,056	-				+1.3
4,071,056	-				+1.1
4,071,056	-				+0.4
4,071,056	-				-0.5
4,071,056	-				+0.8
4,071,056	-				+2.3
4,071,149	-				-0.2
4,071,359	-				-1.0
4,071,574	+				-0.6
4,071,615	-				-0.5
4,071,616	+				-0.1
4,071,690	+				-0.8
4,071,724	+		Psyr_3409	0.11	-2.0
4,071,724	+		Psyr_3409	0.11	+2.0
4,071,764	-		Psyr_3409	0.13	-0.5
4,071,766	+		Psyr_3409	0.13	-1.5
4,071,767	-		Psyr_3409	0.14	-1.7
4,071,825	+		Psyr_3409	0.17	+1.2
4,071,882	-		Psyr_3409	0.20	+0.7
4,071,922	-		Psyr_3409	0.22	-0.5
4,071,922	-		Psyr_3409	0.22	-1.5
4,071,988	+		Psyr_3409	0.26	+1.2
4,071,988	+		Psyr_3409	0.26	-0.3
4,071,989	-		Psyr_3409	0.26	-0.4
4,071,989	-		Psyr_3409	0.26	-0.8
4,071,989	-		Psyr_3409	0.26	+0.2
4,072,048	-		Psyr_3409	0.29	+1.3