Experiment: MoLS4 with L-Tryptophan (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DVU1274 and DVU1275 are separated by 55 nucleotides DVU1275 and DVU1276 overlap by 4 nucleotides DVU1276 and DVU1277 are separated by 284 nucleotides DVU1277 and tRNA-SeC(p) are separated by 156 nucleotides
DVU1274: DVU1274 - hypothetical protein (TIGR), at 1,365,953 to 1,366,396
DVU1274
DVU1275: DVU1275 - hypothetical protein (TIGR), at 1,366,452 to 1,367,012
DVU1275
DVU1276: DVU1276 - hypothetical protein (TIGR), at 1,367,009 to 1,368,928
DVU1276
DVU1277: DVU1277 - hypothetical protein (TIGR), at 1,369,213 to 1,369,350
DVU1277
DVU_tRNA-SeC(p)-1: tRNA-SeC(p) - tRNA with anticodon TCA for SeC(p) (VIMSS-AUTO), at 1,369,507 to 1,369,596
tRNA-SeC(p)
Position (kb)
1367
1368
1369 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 1366.017 kb on + strand, within DVU1274 at 1366.081 kb on + strand, within DVU1274 at 1366.169 kb on - strand, within DVU1274 at 1366.180 kb on + strand, within DVU1274 at 1366.246 kb on - strand, within DVU1274 at 1366.246 kb on - strand, within DVU1274 at 1366.342 kb on - strand, within DVU1274 at 1366.344 kb on + strand, within DVU1274 at 1366.345 kb on + strand, within DVU1274 at 1366.412 kb on + strand at 1366.449 kb on + strand at 1366.459 kb on + strand at 1366.464 kb on + strand at 1366.528 kb on + strand, within DVU1275 at 1366.534 kb on + strand, within DVU1275 at 1366.544 kb on + strand, within DVU1275 at 1366.560 kb on + strand, within DVU1275 at 1366.604 kb on + strand, within DVU1275 at 1366.622 kb on - strand, within DVU1275 at 1366.679 kb on + strand, within DVU1275 at 1366.731 kb on - strand, within DVU1275 at 1366.738 kb on - strand, within DVU1275 at 1366.760 kb on + strand, within DVU1275 at 1366.826 kb on + strand, within DVU1275 at 1366.834 kb on - strand, within DVU1275 at 1367.015 kb on - strand at 1367.025 kb on - strand at 1367.085 kb on + strand at 1367.152 kb on + strand at 1367.160 kb on - strand at 1367.198 kb on + strand at 1367.206 kb on - strand, within DVU1276 at 1367.206 kb on - strand, within DVU1276 at 1367.336 kb on + strand, within DVU1276 at 1367.364 kb on + strand, within DVU1276 at 1367.372 kb on - strand, within DVU1276 at 1367.376 kb on + strand, within DVU1276 at 1367.452 kb on + strand, within DVU1276 at 1367.537 kb on + strand, within DVU1276 at 1367.537 kb on + strand, within DVU1276 at 1367.537 kb on + strand, within DVU1276 at 1367.545 kb on - strand, within DVU1276 at 1367.545 kb on - strand, within DVU1276 at 1367.597 kb on + strand, within DVU1276 at 1367.609 kb on + strand, within DVU1276 at 1367.634 kb on + strand, within DVU1276 at 1367.666 kb on - strand, within DVU1276 at 1367.698 kb on - strand, within DVU1276 at 1367.749 kb on + strand, within DVU1276 at 1367.749 kb on + strand, within DVU1276 at 1367.757 kb on - strand, within DVU1276 at 1367.757 kb on - strand, within DVU1276 at 1367.849 kb on - strand, within DVU1276 at 1367.874 kb on - strand, within DVU1276 at 1367.967 kb on + strand, within DVU1276 at 1367.975 kb on - strand, within DVU1276 at 1367.975 kb on - strand, within DVU1276 at 1368.029 kb on + strand, within DVU1276 at 1368.110 kb on + strand, within DVU1276 at 1368.136 kb on + strand, within DVU1276 at 1368.226 kb on - strand, within DVU1276 at 1368.236 kb on - strand, within DVU1276 at 1368.280 kb on - strand, within DVU1276 at 1368.452 kb on - strand, within DVU1276 at 1368.469 kb on - strand, within DVU1276 at 1368.505 kb on + strand, within DVU1276 at 1368.633 kb on + strand, within DVU1276 at 1368.648 kb on - strand, within DVU1276 at 1368.648 kb on - strand, within DVU1276 at 1368.648 kb on - strand, within DVU1276 at 1368.648 kb on - strand, within DVU1276 at 1368.703 kb on - strand, within DVU1276 at 1368.708 kb on - strand, within DVU1276 at 1368.897 kb on + strand at 1369.039 kb on - strand at 1369.148 kb on - strand at 1369.263 kb on - strand, within DVU1277 at 1369.337 kb on + strand at 1369.443 kb on + strand at 1369.613 kb on - strand at 1369.659 kb on - strand at 1369.677 kb on + strand at 1369.696 kb on + strand at 1369.704 kb on - strand at 1369.830 kb on - strand at 1369.862 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction MoLS4 with L-Tryptophan (N) remove 1,366,017 + DVU1274 0.14 +0.7 1,366,081 + DVU1274 0.29 +1.9 1,366,169 - DVU1274 0.49 +1.0 1,366,180 + DVU1274 0.51 -0.8 1,366,246 - DVU1274 0.66 +0.6 1,366,246 - DVU1274 0.66 +0.8 1,366,342 - DVU1274 0.88 +1.3 1,366,344 + DVU1274 0.88 +0.9 1,366,345 + DVU1274 0.88 +1.3 1,366,412 + -0.1 1,366,449 + +0.6 1,366,459 + +0.5 1,366,464 + +0.7 1,366,528 + DVU1275 0.14 +1.4 1,366,534 + DVU1275 0.15 +1.2 1,366,544 + DVU1275 0.16 +0.9 1,366,560 + DVU1275 0.19 +0.9 1,366,604 + DVU1275 0.27 +1.1 1,366,622 - DVU1275 0.30 +0.4 1,366,679 + DVU1275 0.40 -0.9 1,366,731 - DVU1275 0.50 +0.7 1,366,738 - DVU1275 0.51 +1.0 1,366,760 + DVU1275 0.55 +0.8 1,366,826 + DVU1275 0.67 +1.0 1,366,834 - DVU1275 0.68 -0.7 1,367,015 - +1.1 1,367,025 - +0.4 1,367,085 + +0.8 1,367,152 + +0.9 1,367,160 - +0.9 1,367,198 + +0.6 1,367,206 - DVU1276 0.10 -0.5 1,367,206 - DVU1276 0.10 +1.1 1,367,336 + DVU1276 0.17 +1.6 1,367,364 + DVU1276 0.18 -0.5 1,367,372 - DVU1276 0.19 -0.1 1,367,376 + DVU1276 0.19 +0.8 1,367,452 + DVU1276 0.23 +0.8 1,367,537 + DVU1276 0.28 +0.6 1,367,537 + DVU1276 0.28 -0.7 1,367,537 + DVU1276 0.28 +0.8 1,367,545 - DVU1276 0.28 +1.2 1,367,545 - DVU1276 0.28 +0.6 1,367,597 + DVU1276 0.31 +0.9 1,367,609 + DVU1276 0.31 +0.2 1,367,634 + DVU1276 0.33 +1.2 1,367,666 - DVU1276 0.34 +0.3 1,367,698 - DVU1276 0.36 +1.7 1,367,749 + DVU1276 0.39 +0.1 1,367,749 + DVU1276 0.39 -0.6 1,367,757 - DVU1276 0.39 -0.5 1,367,757 - DVU1276 0.39 +0.9 1,367,849 - DVU1276 0.44 +0.4 1,367,874 - DVU1276 0.45 +0.9 1,367,967 + DVU1276 0.50 +0.8 1,367,975 - DVU1276 0.50 +1.1 1,367,975 - DVU1276 0.50 -0.4 1,368,029 + DVU1276 0.53 +1.8 1,368,110 + DVU1276 0.57 +0.8 1,368,136 + DVU1276 0.59 +0.7 1,368,226 - DVU1276 0.63 +1.5 1,368,236 - DVU1276 0.64 +0.5 1,368,280 - DVU1276 0.66 +0.5 1,368,452 - DVU1276 0.75 -0.3 1,368,469 - DVU1276 0.76 +1.7 1,368,505 + DVU1276 0.78 -0.5 1,368,633 + DVU1276 0.85 +1.1 1,368,648 - DVU1276 0.85 +1.1 1,368,648 - DVU1276 0.85 +1.0 1,368,648 - DVU1276 0.85 -0.9 1,368,648 - DVU1276 0.85 -0.0 1,368,703 - DVU1276 0.88 +1.5 1,368,708 - DVU1276 0.88 +0.6 1,368,897 + +1.3 1,369,039 - -0.7 1,369,148 - +1.2 1,369,263 - DVU1277 0.36 -2.1 1,369,337 + +0.7 1,369,443 + -0.1 1,369,613 - +0.1 1,369,659 - -0.1 1,369,677 + -0.8 1,369,696 + -0.6 1,369,704 - +0.9 1,369,830 - -0.2 1,369,862 + +0.9
Or see this region's nucleotide sequence