Strain Fitness in Synechococcus elongatus PCC 7942 around Synpcc7942_2415

Experiment: Biofilm in WT Conditioned Media in Flasks with Spin rep 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Biofilm in WT Conditioned Media in Flasks with Spin rep 1
2,485,903	+		Synpcc7942_2414	0.29	-2.0
2,485,912	+		Synpcc7942_2414	0.30	-1.5
2,485,948	-		Synpcc7942_2414	0.33	-0.3
2,485,982	+		Synpcc7942_2414	0.37	+0.2
2,486,012	+		Synpcc7942_2414	0.39	+2.2
2,486,032	-		Synpcc7942_2414	0.41	-0.2
2,486,033	-		Synpcc7942_2414	0.41	+0.4
2,486,033	-		Synpcc7942_2414	0.41	+0.6
2,486,033	-		Synpcc7942_2414	0.41	+0.6
2,486,033	-		Synpcc7942_2414	0.41	+1.6
2,486,037	+		Synpcc7942_2414	0.42	+1.6
2,486,040	-		Synpcc7942_2414	0.42	-2.8
2,486,042	+		Synpcc7942_2414	0.42	-1.0
2,486,042	+		Synpcc7942_2414	0.42	+0.0
2,486,042	+		Synpcc7942_2414	0.42	+1.6
2,486,045	-		Synpcc7942_2414	0.43	-0.1
2,486,045	-		Synpcc7942_2414	0.43	-1.2
2,486,050	-		Synpcc7942_2414	0.43	+2.0
2,486,069	+		Synpcc7942_2414	0.45	+1.6
2,486,069	+		Synpcc7942_2414	0.45	+1.0
2,486,098	+		Synpcc7942_2414	0.48	+0.6
2,486,129	+		Synpcc7942_2414	0.51	+0.0
2,486,129	+		Synpcc7942_2414	0.51	+1.6
2,486,130	-		Synpcc7942_2414	0.51	+1.2
2,486,137	-		Synpcc7942_2414	0.51	-1.6
2,486,147	-		Synpcc7942_2414	0.52	+1.6
2,486,151	-		Synpcc7942_2414	0.53	-0.2
2,486,151	-		Synpcc7942_2414	0.53	-0.4
2,486,151	-		Synpcc7942_2414	0.53	+1.6
2,486,151	-		Synpcc7942_2414	0.53	-0.4
2,486,151	-		Synpcc7942_2414	0.53	-0.4
2,486,214	+		Synpcc7942_2414	0.59	-1.7
2,486,214	+		Synpcc7942_2414	0.59	+0.6
2,486,224	+		Synpcc7942_2414	0.60	+2.6
2,486,318	+		Synpcc7942_2414	0.68	-1.6
2,486,379	+		Synpcc7942_2414	0.74	+1.6
2,486,387	-		Synpcc7942_2414	0.75	+1.1
2,486,436	+		Synpcc7942_2414	0.80	+0.6
2,486,439	-		Synpcc7942_2414	0.80	+1.6
2,486,452	+		Synpcc7942_2414	0.81	-0.4
2,486,498	+		Synpcc7942_2414	0.86	+0.1
2,486,498	+		Synpcc7942_2414	0.86	+0.6
2,486,528	-		Synpcc7942_2414	0.88	+3.9
2,486,528	-		Synpcc7942_2414	0.88	+2.4
2,486,532	+		Synpcc7942_2414	0.89	-2.3
2,486,532	+		Synpcc7942_2414	0.89	+0.6
2,486,565	+				+1.6
2,486,573	-				-1.6
2,486,586	+				-0.4
2,486,596	+				+0.0
2,486,604	-				+1.6
2,486,606	-				-2.6
2,486,608	+				+0.6
2,486,608	+				+1.6
2,486,608	+				-0.8
2,486,608	+				+0.6
2,486,616	-				-1.5
2,486,624	-				-1.3
2,486,645	+				-2.9
2,486,705	-				-1.1
2,486,705	-				-0.7
2,486,718	+				+0.0
2,486,718	+				+1.3
2,486,726	-				+2.0
2,486,726	-				+2.5
2,486,726	-				+0.9
2,486,731	-				-2.0
2,486,731	-				-1.4
2,486,731	-				+1.0
2,486,793	+				+2.6
2,486,795	-				-0.7
2,486,801	-				-0.7
2,486,808	+				-1.0
2,486,812	+				-1.9
2,486,814	+				+0.0
2,486,814	+				+0.0
2,486,814	+				+1.6
2,486,822	-				-0.6
2,486,822	-				-0.6
2,486,822	-				+0.0
2,486,833	+				-2.5
2,486,841	-				-1.3
2,486,890	-				-0.8
2,488,394	+				+2.6
2,488,394	+				+1.6
2,488,438	+				+1.6
2,488,487	+				-1.5
2,488,490	-				-0.2
2,488,490	-				-0.2
2,488,490	-				+1.6
2,488,490	-				-2.2
2,488,491	-				+1.6
2,488,495	-				-1.1
2,488,495	-				-0.8
2,488,499	+				-0.4
2,488,500	-				-0.2
2,488,514	+				+1.2
2,488,514	+				+0.4
2,488,522	-	srrA	Synpcc7942_2416	0.11	+0.9
2,488,522	-	srrA	Synpcc7942_2416	0.11	+0.8
2,488,527	-	srrA	Synpcc7942_2416	0.11	+1.6
2,488,542	-	srrA	Synpcc7942_2416	0.13	+0.5
2,488,574	-	srrA	Synpcc7942_2416	0.17	-0.1
2,488,588	+	srrA	Synpcc7942_2416	0.19	+1.3
2,488,591	-	srrA	Synpcc7942_2416	0.20	-1.9
2,488,596	-	srrA	Synpcc7942_2416	0.20	+0.3
2,488,596	-	srrA	Synpcc7942_2416	0.20	+0.6
2,488,603	+	srrA	Synpcc7942_2416	0.21	+1.6
2,488,617	-	srrA	Synpcc7942_2416	0.23	-0.9
2,488,617	-	srrA	Synpcc7942_2416	0.23	-0.3
2,488,617	-	srrA	Synpcc7942_2416	0.23	-1.8
2,488,646	-	srrA	Synpcc7942_2416	0.27	-0.2
2,488,648	-	srrA	Synpcc7942_2416	0.27	+0.6
2,488,669	+	srrA	Synpcc7942_2416	0.30	+1.6
2,488,670	-	srrA	Synpcc7942_2416	0.30	-0.6
2,488,690	+	srrA	Synpcc7942_2416	0.33	+2.4
2,488,727	-	srrA	Synpcc7942_2416	0.37	+1.9
2,488,727	-	srrA	Synpcc7942_2416	0.37	+0.5
2,488,772	+	srrA	Synpcc7942_2416	0.43	+4.2
2,488,772	+	srrA	Synpcc7942_2416	0.43	+0.6
2,488,780	-	srrA	Synpcc7942_2416	0.44	+1.7
2,488,782	+	srrA	Synpcc7942_2416	0.45	+2.2
2,488,785	-	srrA	Synpcc7942_2416	0.45	+0.6
2,488,821	+	srrA	Synpcc7942_2416	0.50	-1.0
2,488,831	+	srrA	Synpcc7942_2416	0.51	-0.7
2,488,834	-	srrA	Synpcc7942_2416	0.51	+0.1
2,488,858	+	srrA	Synpcc7942_2416	0.54	+0.0
2,488,866	-	srrA	Synpcc7942_2416	0.55	+3.0
2,488,867	+	srrA	Synpcc7942_2416	0.56	-0.5
2,488,867	+	srrA	Synpcc7942_2416	0.56	+0.9
2,488,875	-	srrA	Synpcc7942_2416	0.57	+0.9
2,488,875	-	srrA	Synpcc7942_2416	0.57	+0.3
2,488,875	-	srrA	Synpcc7942_2416	0.57	-2.6
2,488,899	-	srrA	Synpcc7942_2416	0.60	+0.6
2,488,906	+	srrA	Synpcc7942_2416	0.61	-0.1
2,488,912	-	srrA	Synpcc7942_2416	0.61	-0.8
2,488,926	+	srrA	Synpcc7942_2416	0.63	-2.5
2,488,926	+	srrA	Synpcc7942_2416	0.63	-0.8
2,488,931	+	srrA	Synpcc7942_2416	0.64	-1.2
2,488,934	-	srrA	Synpcc7942_2416	0.64	+0.5
2,488,934	-	srrA	Synpcc7942_2416	0.64	-0.3
2,488,934	-	srrA	Synpcc7942_2416	0.64	-1.0
2,488,934	-	srrA	Synpcc7942_2416	0.64	-0.2
2,488,934	-	srrA	Synpcc7942_2416	0.64	-0.5
2,488,946	-	srrA	Synpcc7942_2416	0.66	+1.8
2,488,947	+	srrA	Synpcc7942_2416	0.66	-0.2
2,488,947	+	srrA	Synpcc7942_2416	0.66	+0.0
2,488,999	+	srrA	Synpcc7942_2416	0.73	+1.6
2,489,025	+	srrA	Synpcc7942_2416	0.76	-2.0
2,489,054	+	srrA	Synpcc7942_2416	0.80	-0.2
2,489,090	+	srrA	Synpcc7942_2416	0.85	-2.2
2,489,101	+	srrA	Synpcc7942_2416	0.86	+2.1
2,489,119	+	srrA	Synpcc7942_2416	0.88	+2.0
2,489,127	-	srrA	Synpcc7942_2416	0.89	-2.1
2,489,182	-				+0.0
2,489,191	+				+1.6
2,489,299	+				-0.6
2,489,354	+				+1.6
2,489,366	+				-0.7