Strain Fitness in Synechococcus elongatus PCC 7942 around Synpcc7942_1904

Experiment: Biofilm in WT Conditioned Media in Flasks with Spin rep 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Biofilm in WT Conditioned Media in Flasks with Spin rep 1
1,977,517	+		Synpcc7942_1903	0.47	+1.1
1,977,718	-		Synpcc7942_1903	0.65	+2.0
1,977,835	-		Synpcc7942_1903	0.75	+1.6
1,978,134	+				-2.1
1,978,366	-	hlyD	Synpcc7942_1904	0.18	+0.1
1,978,550	-	hlyD	Synpcc7942_1904	0.32	+3.8
1,978,572	-	hlyD	Synpcc7942_1904	0.33	+1.2
1,978,661	-	hlyD	Synpcc7942_1904	0.40	-0.4
1,978,738	+	hlyD	Synpcc7942_1904	0.46	-2.1
1,978,747	-	hlyD	Synpcc7942_1904	0.47	-0.9
1,978,792	-	hlyD	Synpcc7942_1904	0.50	+1.4
1,978,807	+	hlyD	Synpcc7942_1904	0.51	-0.7
1,978,832	+	hlyD	Synpcc7942_1904	0.53	+0.3
1,978,842	-	hlyD	Synpcc7942_1904	0.54	+0.2
1,978,938	+	hlyD	Synpcc7942_1904	0.61	-2.5
1,979,010	-	hlyD	Synpcc7942_1904	0.66	+2.4
1,979,096	+	hlyD	Synpcc7942_1904	0.73	-0.4
1,979,298	-	hlyD	Synpcc7942_1904	0.88	+1.3
1,979,300	-	hlyD	Synpcc7942_1904	0.88	+1.4
1,979,317	+	hlyD	Synpcc7942_1904	0.90	-0.4
1,979,487	-				-1.5
1,979,487	-				+2.9
1,979,487	-				-0.7
1,979,487	-				-0.1
1,979,494	+				+0.9
1,979,571	-				+2.6
1,979,595	-				+0.3
1,979,626	+				+0.6
1,979,626	+				+1.1
1,979,626	+				+0.4
1,979,626	+				+0.4
1,979,626	+				+3.1
1,979,634	-				-0.9
1,979,634	-				-1.3
1,979,634	-				+0.6
1,979,656	+				+1.9
1,979,669	-				-0.0
1,979,686	+				+2.1
1,979,762	+				-1.2
1,979,767	+				+1.9
1,979,767	+				-1.1
1,979,767	+				+1.6
1,979,775	-				-0.8
1,979,812	+	hlyB	Synpcc7942_1905	0.11	-2.4
1,979,833	+	hlyB	Synpcc7942_1905	0.11	-2.0
1,979,833	+	hlyB	Synpcc7942_1905	0.11	-0.5
1,979,841	-	hlyB	Synpcc7942_1905	0.11	-0.8
1,979,843	-	hlyB	Synpcc7942_1905	0.12	-2.8
1,979,970	+				+0.1
1,979,970	+	hlyB	Synpcc7942_1905	0.16	-0.8
1,980,101	+	hlyB	Synpcc7942_1905	0.20	-0.3
1,980,101	+	hlyB	Synpcc7942_1905	0.20	-1.1
1,980,101	+	hlyB	Synpcc7942_1905	0.20	-0.3
1,980,109	-	hlyB	Synpcc7942_1905	0.20	+0.6
1,980,109	-	hlyB	Synpcc7942_1905	0.20	-0.3
1,980,109	-	hlyB	Synpcc7942_1905	0.20	-1.2
1,980,111	+	hlyB	Synpcc7942_1905	0.20	+0.1
1,980,114	+	hlyB	Synpcc7942_1905	0.21	+3.1
1,980,350	-	hlyB	Synpcc7942_1905	0.28	-2.5
1,980,368	+	hlyB	Synpcc7942_1905	0.29	-2.8
1,980,402	+	hlyB	Synpcc7942_1905	0.30	+0.1
1,980,449	+	hlyB	Synpcc7942_1905	0.32	+3.1