Strain Fitness in Synechococcus elongatus PCC 7942 around Synpcc7942_1540

Experiment: Biofilm in WT Conditioned Media in Flasks with Spin rep 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Biofilm in WT Conditioned Media in Flasks with Spin rep 1
1,596,871	+				-1.0
1,596,879	-				-1.1
1,596,879	-				-0.9
1,596,879	-				+0.3
1,596,887	-				-1.0
1,596,897	-				-2.0
1,597,002	-				+0.3
1,597,016	+		Synpcc7942_1538	0.12	-1.2
1,597,086	+		Synpcc7942_1538	0.30	-2.2
1,597,225	+		Synpcc7942_1538	0.64	+1.1
1,597,225	+		Synpcc7942_1538	0.64	+0.6
1,597,233	-		Synpcc7942_1538	0.66	+0.0
1,597,276	+		Synpcc7942_1538	0.77	+1.6
1,597,389	+				-1.4
1,597,458	+				+1.6
1,597,466	+				+1.0
1,597,515	+				+3.2
1,597,515	+				-0.7
1,597,537	-				-2.1
1,597,539	+				+1.1
1,597,547	-		Synpcc7942_1539	0.10	-1.2
1,597,551	+		Synpcc7942_1539	0.12	+1.6
1,597,585	-		Synpcc7942_1539	0.23	+0.3
1,597,587	+		Synpcc7942_1539	0.23	+0.6
1,597,587	+		Synpcc7942_1539	0.23	-1.5
1,597,595	-		Synpcc7942_1539	0.26	-1.6
1,597,595	-		Synpcc7942_1539	0.26	+0.0
1,597,598	+		Synpcc7942_1539	0.27	+1.6
1,597,635	+		Synpcc7942_1539	0.39	-1.9
1,597,640	+		Synpcc7942_1539	0.41	+0.6
1,597,641	-		Synpcc7942_1539	0.41	-3.0
1,597,641	-		Synpcc7942_1539	0.41	+1.6
1,597,643	+		Synpcc7942_1539	0.42	-1.7
1,597,645	+		Synpcc7942_1539	0.43	-0.8
1,597,645	+		Synpcc7942_1539	0.43	-0.0
1,597,647	+		Synpcc7942_1539	0.43	+0.6
1,597,647	+		Synpcc7942_1539	0.43	-0.7
1,597,651	-		Synpcc7942_1539	0.45	-1.0
1,597,651	-		Synpcc7942_1539	0.45	-1.5
1,597,653	-		Synpcc7942_1539	0.45	-0.9
1,597,655	-		Synpcc7942_1539	0.46	-1.0
1,597,724	-		Synpcc7942_1539	0.69	-0.5
1,597,724	-		Synpcc7942_1539	0.69	-1.3
1,597,846	+				-2.4
1,597,846	+				+0.6
1,597,914	+				-0.9
1,598,003	-	isiC	Synpcc7942_1540	0.21	-2.2
1,598,003	-	isiC	Synpcc7942_1540	0.21	-1.2
1,598,322	+	isiC	Synpcc7942_1540	0.66	+0.6
1,598,358	-	isiC	Synpcc7942_1540	0.71	-1.8
1,598,408	+	isiC	Synpcc7942_1540	0.78	-0.1
1,598,418	+	isiC	Synpcc7942_1540	0.79	+0.7
1,598,446	+	isiC	Synpcc7942_1540	0.83	-1.5
1,598,513	+				-0.7
1,598,521	-				-0.8
1,598,535	-				-0.5
1,598,537	+				-2.2
1,598,545	-				+1.3
1,598,545	-				-1.8
1,598,555	-				-1.0
1,598,562	+				+1.6
1,598,608	+				+0.3
1,598,608	+				-1.0
1,598,616	-				-0.1
1,598,620	+				+0.6
1,598,620	+				-1.7
1,598,626	-				-1.2
1,598,654	+				-1.0
1,598,779	-	isiB	Synpcc7942_1541	0.24	+0.6
1,598,794	+	isiB	Synpcc7942_1541	0.27	+0.5
1,598,973	-	isiB	Synpcc7942_1541	0.62	-0.4
1,598,982	-	isiB	Synpcc7942_1541	0.64	-1.8
1,599,070	-	isiB	Synpcc7942_1541	0.81	-1.0
1,599,170	+				-0.9
1,599,215	+				+2.2
1,599,215	+				-2.3
1,599,215	+				+0.6
1,599,223	-				-1.6
1,599,223	-				-1.6
1,599,223	-				+0.0
1,599,359	-				-1.9
1,599,369	-				+2.2
1,599,369	-				-0.2
1,599,409	+				-0.3
1,599,451	-				+1.6
1,599,478	-	isiA	Synpcc7942_1542	0.12	+0.0
1,599,487	+	isiA	Synpcc7942_1542	0.13	-1.1
1,599,488	-	isiA	Synpcc7942_1542	0.13	+0.1
1,599,522	+	isiA	Synpcc7942_1542	0.16	-2.7
1,599,542	-	isiA	Synpcc7942_1542	0.18	+3.2