Strain Fitness in Synechococcus elongatus PCC 7942 around Synpcc7942_1403

Experiment: Biofilm in WT Conditioned Media in Flasks with Spin rep 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Biofilm in WT Conditioned Media in Flasks with Spin rep 1
1,453,679	-		Synpcc7942_1402	0.29	+1.0
1,453,689	-		Synpcc7942_1402	0.30	+1.3
1,453,689	-		Synpcc7942_1402	0.30	-2.8
1,453,844	+		Synpcc7942_1402	0.42	+1.6
1,453,844	+		Synpcc7942_1402	0.42	-1.9
1,453,852	-		Synpcc7942_1402	0.42	-0.7
1,453,854	-		Synpcc7942_1402	0.43	-0.6
1,454,033	-		Synpcc7942_1402	0.57	+1.9
1,454,059	+		Synpcc7942_1402	0.59	-1.4
1,454,210	+		Synpcc7942_1402	0.71	+1.6
1,454,286	-		Synpcc7942_1402	0.77	-2.6
1,454,297	-		Synpcc7942_1402	0.78	-1.6
1,454,297	-		Synpcc7942_1402	0.78	-1.8
1,454,297	-		Synpcc7942_1402	0.78	-0.9
1,454,356	-		Synpcc7942_1402	0.82	-1.0
1,454,356	-		Synpcc7942_1402	0.82	+0.4
1,454,451	+				+1.0
1,454,461	+				+1.6
1,454,508	+				+1.8
1,454,533	+				+2.6
1,454,533	+				+1.7
1,454,533	+				-0.2
1,454,533	+				-1.6
1,454,533	+				+1.9
1,454,541	-				+3.2
1,454,541	-				+0.1
1,454,541	-				-0.4
1,454,541	-				+0.0
1,454,541	-				+0.6
1,454,543	-				-1.4
1,454,570	+				-0.3
1,454,577	-				-1.7
1,454,586	-				-3.1
1,454,591	+				-1.7
1,454,599	-				+1.6
1,454,637	-				-1.6
1,454,637	-				-1.3
1,454,644	-				+2.2
1,454,662	+				+1.6
1,454,670	-				-1.3
1,454,700	-		Synpcc7942_1403	0.14	+1.6
1,454,722	+		Synpcc7942_1403	0.17	-1.1
1,454,726	+		Synpcc7942_1403	0.17	-2.6
1,454,747	-		Synpcc7942_1403	0.20	-1.2
1,454,816	+		Synpcc7942_1403	0.29	-0.7
1,454,827	+		Synpcc7942_1403	0.30	+1.8
1,454,834	+		Synpcc7942_1403	0.31	-0.7
1,454,836	+		Synpcc7942_1403	0.31	-0.2
1,454,846	+		Synpcc7942_1403	0.33	+0.8
1,454,861	-		Synpcc7942_1403	0.34	+0.6
1,454,871	-		Synpcc7942_1403	0.36	+1.6
1,454,886	+		Synpcc7942_1403	0.38	-2.3
1,454,960	+		Synpcc7942_1403	0.47	+0.6
1,454,965	+		Synpcc7942_1403	0.48	+0.6
1,454,973	-		Synpcc7942_1403	0.49	+0.6
1,454,975	+		Synpcc7942_1403	0.49	-0.4
1,454,976	+		Synpcc7942_1403	0.49	+2.6
1,454,977	+		Synpcc7942_1403	0.49	-2.1
1,454,983	-		Synpcc7942_1403	0.50	+0.6
1,454,983	-		Synpcc7942_1403	0.50	-1.5
1,455,007	+		Synpcc7942_1403	0.53	-1.6
1,455,021	+		Synpcc7942_1403	0.55	+2.6
1,455,021	+		Synpcc7942_1403	0.55	-3.2
1,455,029	-		Synpcc7942_1403	0.56	+2.4
1,455,035	-		Synpcc7942_1403	0.57	+1.6
1,455,040	-		Synpcc7942_1403	0.58	+2.3
1,455,051	-		Synpcc7942_1403	0.59	-1.6
1,455,073	-		Synpcc7942_1403	0.62	+2.6
1,455,090	+		Synpcc7942_1403	0.64	+2.6
1,455,110	+				+1.6
1,455,118	-		Synpcc7942_1403	0.68	+1.6
1,455,139	+		Synpcc7942_1403	0.70	+1.5
1,455,147	+		Synpcc7942_1403	0.71	+2.0
1,455,147	+		Synpcc7942_1403	0.71	-1.4
1,455,225	+		Synpcc7942_1403	0.81	+1.6
1,455,227	+		Synpcc7942_1403	0.82	+2.1
1,455,233	-		Synpcc7942_1403	0.82	-0.8
1,455,233	-		Synpcc7942_1403	0.82	+1.6
1,455,237	+		Synpcc7942_1403	0.83	-2.9
1,455,247	-		Synpcc7942_1403	0.84	-0.2
1,455,272	+		Synpcc7942_1403	0.87	-0.5
1,455,282	+		Synpcc7942_1403	0.89	+0.6
1,455,289	-		Synpcc7942_1403	0.90	+1.8
1,455,304	-				+0.7
1,455,306	+				+1.6
1,455,309	-				-0.3
1,455,314	-				-0.5
1,455,345	-				-0.6
1,455,364	-				-3.5
1,456,085	+				+2.6
1,456,095	-				-0.4
1,456,106	-				+0.4
1,456,108	+				-0.7
1,456,111	+				-0.7
1,456,119	-				-2.6
1,456,119	-				+1.6
1,456,131	+				+0.0
1,456,152	+				-1.4
1,456,162	+				-2.0
1,456,162	+				-0.3
1,456,170	-				-0.6
1,456,190	+				-0.4
1,456,203	-				-1.4
1,456,205	+				-1.1
1,456,212	+				-1.3
1,456,213	-				+0.5
1,456,213	-				-1.2
1,456,217	+				-1.4
1,456,220	-				+1.6
1,456,220	-				+3.2
1,456,225	+				+0.4
1,456,283	-				-0.8
1,456,283	-				+3.6
1,456,301	-				+0.6
1,456,316	-		Synpcc7942_1405	0.11	-0.4
1,456,316	-		Synpcc7942_1405	0.11	-2.4
1,456,316	-		Synpcc7942_1405	0.11	-1.7
1,456,337	-		Synpcc7942_1405	0.15	+0.6