Strain Fitness in Synechococcus elongatus PCC 7942 around Synpcc7942_0088

Experiment: Biofilm in WT Conditioned Media in Flasks with Spin rep 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Biofilm in WT Conditioned Media in Flasks with Spin rep 1
85,561	-		Synpcc7942_0087	0.39	-0.6
85,583	+		Synpcc7942_0087	0.41	+0.5
85,618	-		Synpcc7942_0087	0.43	+2.1
85,618	-		Synpcc7942_0087	0.43	-3.0
85,638	+		Synpcc7942_0087	0.45	-0.5
85,638	+		Synpcc7942_0087	0.45	+1.5
85,644	-		Synpcc7942_0087	0.45	-1.9
85,649	+		Synpcc7942_0087	0.45	+1.1
85,649	+		Synpcc7942_0087	0.45	-1.2
85,649	+		Synpcc7942_0087	0.45	+1.5
85,649	+		Synpcc7942_0087	0.45	-0.5
85,649	+		Synpcc7942_0087	0.45	-1.8
85,649	+		Synpcc7942_0087	0.45	-1.6
85,659	+		Synpcc7942_0087	0.46	-2.2
85,696	-		Synpcc7942_0087	0.48	+0.5
85,698	+		Synpcc7942_0087	0.49	-0.8
85,700	+		Synpcc7942_0087	0.49	-0.3
85,707	-		Synpcc7942_0087	0.49	-2.2
85,713	-		Synpcc7942_0087	0.50	-1.0
85,745	-		Synpcc7942_0087	0.52	-1.6
85,784	+		Synpcc7942_0087	0.54	-1.9
85,784	-		Synpcc7942_0087	0.54	+2.7
85,789	+		Synpcc7942_0087	0.55	+1.5
85,789	+		Synpcc7942_0087	0.55	-1.6
85,794	+		Synpcc7942_0087	0.55	+1.5
85,794	+		Synpcc7942_0087	0.55	+0.5
85,797	-		Synpcc7942_0087	0.55	-0.6
85,797	-		Synpcc7942_0087	0.55	+1.5
85,797	-		Synpcc7942_0087	0.55	-3.0
85,797	-		Synpcc7942_0087	0.55	-0.9
85,814	+		Synpcc7942_0087	0.56	-2.8
85,814	+		Synpcc7942_0087	0.56	+0.3
85,816	+		Synpcc7942_0087	0.56	-0.2
85,824	-		Synpcc7942_0087	0.57	+1.5
85,856	+		Synpcc7942_0087	0.59	-1.0
85,856	+		Synpcc7942_0087	0.59	+1.4
85,864	-		Synpcc7942_0087	0.60	+1.0
85,878	-		Synpcc7942_0087	0.60	-2.3
85,927	+		Synpcc7942_0087	0.64	+0.1
85,971	+		Synpcc7942_0087	0.67	-0.8
85,986	-		Synpcc7942_0087	0.68	-1.8
85,986	-		Synpcc7942_0087	0.68	-2.7
85,986	-		Synpcc7942_0087	0.68	-1.3
85,987	-		Synpcc7942_0087	0.68	+0.4
85,998	-		Synpcc7942_0087	0.68	-1.0
86,106	-		Synpcc7942_0087	0.76	-3.9
86,140	+		Synpcc7942_0087	0.78	-2.1
86,151	+		Synpcc7942_0087	0.79	-2.3
86,159	+		Synpcc7942_0087	0.79	-2.0
86,161	+		Synpcc7942_0087	0.79	+2.8
86,161	+		Synpcc7942_0087	0.79	-0.5
86,161	+		Synpcc7942_0087	0.79	-1.2
86,161	+		Synpcc7942_0087	0.79	+1.5
86,166	-		Synpcc7942_0087	0.79	-1.6
86,169	-		Synpcc7942_0087	0.80	-2.5
86,194	-		Synpcc7942_0087	0.81	-0.9
86,200	+		Synpcc7942_0087	0.82	-1.3
86,219	+		Synpcc7942_0087	0.83	-0.1
86,244	+		Synpcc7942_0087	0.85	-1.2
86,246	+		Synpcc7942_0087	0.85	+0.8
86,246	+		Synpcc7942_0087	0.85	+1.5
86,249	+		Synpcc7942_0087	0.85	+2.5
86,261	+		Synpcc7942_0087	0.86	-1.2
86,264	-		Synpcc7942_0087	0.86	-1.2
86,306	+		Synpcc7942_0087	0.89	-1.8
86,314	-		Synpcc7942_0087	0.89	+1.0
86,328	+				-2.6
86,328	-				-2.3
86,347	-				-2.1
86,369	+				+0.5
86,381	-				-1.5
86,393	+				-0.5
86,408	+				+1.5
86,413	+				-1.7
86,421	-				-1.7
86,421	-				-1.7
86,426	-				+3.1
86,448	+				-1.8
86,496	+				+1.5
86,501	+				-3.5
86,511	-				+0.2
86,539	+				+1.0
86,539	+				-1.9
86,539	+				+1.2
86,539	+				-1.7
86,545	+				-1.3
86,547	-				-0.5
86,562	-				-0.5
86,564	+				-0.5
86,564	+				+3.1
86,615	+				-1.0
86,632	-		Synpcc7942_0088	0.12	-2.3
86,634	+				-1.9
86,637	-		Synpcc7942_0088	0.12	-0.9
86,642	-		Synpcc7942_0088	0.13	+2.0
86,644	+		Synpcc7942_0088	0.13	-1.3
86,674	+		Synpcc7942_0088	0.18	+1.5
86,682	-		Synpcc7942_0088	0.19	+1.5
86,682	-		Synpcc7942_0088	0.19	-0.6
86,686	-		Synpcc7942_0088	0.19	+0.5
86,706	+		Synpcc7942_0088	0.22	+0.1
86,708	-		Synpcc7942_0088	0.22	-0.8
86,725	+		Synpcc7942_0088	0.25	+1.5
86,735	+		Synpcc7942_0088	0.26	-2.6
86,746	+		Synpcc7942_0088	0.28	-1.9
86,754	-		Synpcc7942_0088	0.29	+1.5
86,769	+				+1.5
86,793	+		Synpcc7942_0088	0.34	-2.4
86,796	-		Synpcc7942_0088	0.34	-2.1
86,801	-		Synpcc7942_0088	0.35	-2.1
86,804	+		Synpcc7942_0088	0.36	-1.7
86,843	-		Synpcc7942_0088	0.41	-1.6
86,877	+		Synpcc7942_0088	0.46	+1.5
86,883	+		Synpcc7942_0088	0.46	+0.7
86,891	-		Synpcc7942_0088	0.48	+2.5
86,916	-		Synpcc7942_0088	0.51	-1.5
86,916	-		Synpcc7942_0088	0.51	-0.0
86,966	-		Synpcc7942_0088	0.58	+2.5
86,977	+		Synpcc7942_0088	0.59	+1.5
86,987	+		Synpcc7942_0088	0.61	+2.0
86,987	+		Synpcc7942_0088	0.61	-0.7
86,989	+		Synpcc7942_0088	0.61	-2.6
86,995	-		Synpcc7942_0088	0.62	-2.4
86,997	-		Synpcc7942_0088	0.62	-3.3
87,014	+		Synpcc7942_0088	0.65	+0.5
87,019	-		Synpcc7942_0088	0.65	+1.2
87,022	-		Synpcc7942_0088	0.66	-0.0
87,022	-		Synpcc7942_0088	0.66	-1.4
87,022	-		Synpcc7942_0088	0.66	+0.8
87,068	-		Synpcc7942_0088	0.72	+1.5
87,070	-		Synpcc7942_0088	0.72	-0.2
87,072	+		Synpcc7942_0088	0.73	-1.0
87,078	+		Synpcc7942_0088	0.73	+1.5
87,078	+		Synpcc7942_0088	0.73	-1.3
87,078	+		Synpcc7942_0088	0.73	-0.5
87,080	-		Synpcc7942_0088	0.74	-0.5
87,080	-				-1.0
87,116	+		Synpcc7942_0088	0.79	-1.3
87,134	-		Synpcc7942_0088	0.81	-0.6
87,134	-		Synpcc7942_0088	0.81	+0.5
87,152	+		Synpcc7942_0088	0.84	-1.0
87,157	+		Synpcc7942_0088	0.84	+1.5
87,162	+		Synpcc7942_0088	0.85	+2.9
87,162	+		Synpcc7942_0088	0.85	-1.0
87,187	+		Synpcc7942_0088	0.89	-0.2
87,187	+		Synpcc7942_0088	0.89	-0.0
87,238	-				-1.4
87,238	-				-1.8
87,240	+				+0.5
87,294	+				-2.9
87,309	+				-1.4
87,345	+				+2.5
87,355	+				-0.5
87,355	+				-2.2
87,363	-				-1.5
87,370	+				-1.5
87,378	-				-1.8
87,467	-				+0.2
87,492	+				-0.0
87,499	-				+2.4
87,560	-				+0.6
87,578	+				+1.6
87,597	-				-0.7
87,616	+				-1.9
87,639	+				-1.0
87,669	+				-1.5
87,682	+				+1.5
87,683	+				-1.4
87,839	-				+0.5
87,866	+				-1.2
87,878	+				+0.2
87,878	+				-1.0
87,878	+				-1.9
87,878	+				-0.9
87,878	+				-0.1
87,878	+				-1.2
87,878	+				-1.3
87,878	+				-0.0
87,878	+				-0.0
87,878	+				+1.5
87,878	+				-1.0
87,878	+				-0.7
87,878	+				+1.0
87,878	+				-1.7
87,878	+				-1.0
87,878	+				-0.5
87,886	-				-1.7
87,886	-				+0.5
87,886	-				-0.0
87,886	-				-0.7
87,886	-				+1.2
87,886	-				-1.7
87,886	-				+1.0
87,886	-				+1.1
87,886	-				-1.2
87,886	-				-1.0
87,886	-				-2.2
87,886	-				-1.0
87,886	-				+0.1
87,886	-				-1.0
87,886	-				-0.7
87,886	-				-1.5
87,893	+				+0.5
87,901	-				+1.5
87,947	+				-1.0
88,019	+				-0.5
88,029	+	clcD	Synpcc7942_0089	0.20	-0.2
88,037	-	clcD	Synpcc7942_0089	0.21	-2.3
88,048	+	clcD	Synpcc7942_0089	0.23	+1.5
88,056	+	clcD	Synpcc7942_0089	0.24	-1.6
88,064	-	clcD	Synpcc7942_0089	0.25	+1.7
88,085	+	clcD	Synpcc7942_0089	0.28	-0.1
88,085	+	clcD	Synpcc7942_0089	0.28	+0.5
88,085	+	clcD	Synpcc7942_0089	0.28	-1.3
88,085	+	clcD	Synpcc7942_0089	0.28	+3.9
88,093	-	clcD	Synpcc7942_0089	0.29	+2.1
88,093	-	clcD	Synpcc7942_0089	0.29	+2.1
88,093	-	clcD	Synpcc7942_0089	0.29	+2.3
88,093	-	clcD	Synpcc7942_0089	0.29	-1.0
88,093	-	clcD	Synpcc7942_0089	0.29	-1.3
88,144	+	clcD	Synpcc7942_0089	0.36	-1.3
88,175	-	clcD	Synpcc7942_0089	0.40	+1.0
88,184	+	clcD	Synpcc7942_0089	0.41	-1.6
88,186	+	clcD	Synpcc7942_0089	0.41	-2.3
88,192	-	clcD	Synpcc7942_0089	0.42	+1.5
88,192	-	clcD	Synpcc7942_0089	0.42	-1.1
88,197	+	clcD	Synpcc7942_0089	0.43	-1.2
88,201	+	clcD	Synpcc7942_0089	0.44	-1.8
88,217	+	clcD	Synpcc7942_0089	0.46	-1.8
88,263	+	clcD	Synpcc7942_0089	0.52	-0.9
88,265	-	clcD	Synpcc7942_0089	0.52	-0.5
88,265	-	clcD	Synpcc7942_0089	0.52	+3.3