Strain Fitness in Synechococcus elongatus PCC 7942 around Synpcc7942_0024

Experiment: Biofilm in WT Conditioned Media in Flasks with Spin rep 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Biofilm in WT Conditioned Media in Flasks with Spin rep 1
23,281	+	cax	Synpcc7942_0023	0.21	-2.8
23,291	-	cax	Synpcc7942_0023	0.22	+1.2
23,313	+	cax	Synpcc7942_0023	0.24	-0.2
23,354	-	cax	Synpcc7942_0023	0.28	-3.2
23,366	+	cax	Synpcc7942_0023	0.29	-1.3
23,377	-	cax	Synpcc7942_0023	0.30	-1.0
23,384	+	cax	Synpcc7942_0023	0.31	-1.0
23,434	+	cax	Synpcc7942_0023	0.35	+0.1
23,438	-	cax	Synpcc7942_0023	0.36	-1.3
23,438	-	cax	Synpcc7942_0023	0.36	-0.0
23,442	-	cax	Synpcc7942_0023	0.36	+1.1
23,442	-	cax	Synpcc7942_0023	0.36	-0.6
23,494	+	cax	Synpcc7942_0023	0.41	-0.2
23,507	-	cax	Synpcc7942_0023	0.42	-1.3
23,512	+	cax	Synpcc7942_0023	0.43	+0.5
23,512	+	cax	Synpcc7942_0023	0.43	+1.8
23,512	+	cax	Synpcc7942_0023	0.43	-1.4
23,515	-	cax	Synpcc7942_0023	0.43	+3.1
23,520	-	cax	Synpcc7942_0023	0.43	+0.5
23,520	-	cax	Synpcc7942_0023	0.43	+1.4
23,520	-	cax	Synpcc7942_0023	0.43	-2.8
23,539	-	cax	Synpcc7942_0023	0.45	+1.5
23,556	-	cax	Synpcc7942_0023	0.47	-2.2
23,575	-	cax	Synpcc7942_0023	0.49	-2.0
23,582	-	cax	Synpcc7942_0023	0.49	+0.3
23,593	+	cax	Synpcc7942_0023	0.50	-2.0
23,593	+	cax	Synpcc7942_0023	0.50	-0.8
23,602	-	cax	Synpcc7942_0023	0.51	-1.1
23,606	-	cax	Synpcc7942_0023	0.52	-0.5
23,608	-	cax	Synpcc7942_0023	0.52	-1.7
23,649	+	cax	Synpcc7942_0023	0.56	-0.0
23,726	-	cax	Synpcc7942_0023	0.63	+1.5
23,730	+	cax	Synpcc7942_0023	0.63	+2.5
23,738	-	cax	Synpcc7942_0023	0.64	+2.5
23,738	-	cax	Synpcc7942_0023	0.64	-0.4
23,749	-	cax	Synpcc7942_0023	0.65	+1.3
23,759	+	cax	Synpcc7942_0023	0.66	-1.0
23,760	-	cax	Synpcc7942_0023	0.66	-0.9
23,773	+	cax	Synpcc7942_0023	0.67	-1.9
23,800	+	cax	Synpcc7942_0023	0.70	-0.5
23,826	-	cax	Synpcc7942_0023	0.72	-0.5
23,830	-	cax	Synpcc7942_0023	0.73	-0.8
23,889	+	cax	Synpcc7942_0023	0.78	-0.8
23,889	-	cax	Synpcc7942_0023	0.78	-0.8
23,892	-	cax	Synpcc7942_0023	0.78	+0.5
23,897	-	cax	Synpcc7942_0023	0.79	+0.5
23,912	+	cax	Synpcc7942_0023	0.80	-4.3
23,912	+	cax	Synpcc7942_0023	0.80	-0.4
23,922	+	cax	Synpcc7942_0023	0.81	+0.2
23,922	+	cax	Synpcc7942_0023	0.81	+0.5
23,922	+	cax	Synpcc7942_0023	0.81	-1.3
23,922	+	cax	Synpcc7942_0023	0.81	-0.0
23,922	+	cax	Synpcc7942_0023	0.81	+0.5
23,922	+	cax	Synpcc7942_0023	0.81	-0.9
23,924	+	cax	Synpcc7942_0023	0.81	+0.1
23,930	-	cax	Synpcc7942_0023	0.82	-1.8
23,930	-	cax	Synpcc7942_0023	0.82	+1.9
23,930	-	cax	Synpcc7942_0023	0.82	+1.5
23,932	-	cax	Synpcc7942_0023	0.82	+2.4
23,932	-	cax	Synpcc7942_0023	0.82	-0.3
23,957	-	cax	Synpcc7942_0023	0.85	+3.9
24,099	-				+0.5
24,131	-				-2.5
24,131	-				+2.5
24,136	+				+0.4
24,142	+				+2.5
24,150	-				+1.1
24,189	+				-1.7
24,189	+				-0.0
24,197	+				+5.2
24,205	-				-1.1
24,226	-				+1.7
24,241	+				+1.4
24,268	-				+2.7
24,284	+				-0.4
24,298	-				+2.1
24,319	+		Synpcc7942_0024	0.12	+2.4
24,319	+		Synpcc7942_0024	0.12	+0.7
24,319	+		Synpcc7942_0024	0.12	-1.2
24,319	+		Synpcc7942_0024	0.12	+1.0
24,325	+		Synpcc7942_0024	0.12	-0.3
24,327	-		Synpcc7942_0024	0.12	-0.7
24,327	-		Synpcc7942_0024	0.12	-0.4
24,327	-		Synpcc7942_0024	0.12	-0.9
24,334	-		Synpcc7942_0024	0.13	+2.4
24,338	+		Synpcc7942_0024	0.13	+1.4
24,338	+		Synpcc7942_0024	0.13	+2.3
24,340	+		Synpcc7942_0024	0.13	+2.0
24,348	-		Synpcc7942_0024	0.14	-0.4
24,377	+		Synpcc7942_0024	0.16	-2.7
24,382	+		Synpcc7942_0024	0.17	-1.9
24,385	-		Synpcc7942_0024	0.17	+2.6
24,421	+		Synpcc7942_0024	0.20	-0.6
24,429	-		Synpcc7942_0024	0.21	-0.9
24,535	-		Synpcc7942_0024	0.30	-0.4
24,542	+		Synpcc7942_0024	0.30	-0.8
24,549	-		Synpcc7942_0024	0.31	+2.6
24,550	-		Synpcc7942_0024	0.31	-0.3
24,550	-		Synpcc7942_0024	0.31	-1.0
24,554	+		Synpcc7942_0024	0.31	-2.3
24,568	-		Synpcc7942_0024	0.32	+0.7
24,587	-		Synpcc7942_0024	0.34	+2.7
24,587	-		Synpcc7942_0024	0.34	-2.7
24,588	-		Synpcc7942_0024	0.34	-1.0
24,588	-		Synpcc7942_0024	0.34	+2.1
24,594	+		Synpcc7942_0024	0.35	-0.7
24,602	-		Synpcc7942_0024	0.35	-1.2
24,602	-		Synpcc7942_0024	0.35	-0.3
24,606	+		Synpcc7942_0024	0.36	+2.1
24,629	-		Synpcc7942_0024	0.38	-2.3
24,640	+		Synpcc7942_0024	0.39	-1.4
24,640	+		Synpcc7942_0024	0.39	+2.3
24,652	+		Synpcc7942_0024	0.40	+1.0
24,652	+		Synpcc7942_0024	0.40	+2.5
24,660	-		Synpcc7942_0024	0.40	+2.0
24,682	-		Synpcc7942_0024	0.42	-0.5
24,690	-		Synpcc7942_0024	0.43	-2.2
24,706	+		Synpcc7942_0024	0.44	-0.9
24,743	+		Synpcc7942_0024	0.47	-0.8
24,750	-		Synpcc7942_0024	0.48	-0.8
24,751	-		Synpcc7942_0024	0.48	-0.5
24,781	-		Synpcc7942_0024	0.50	+2.1
24,789	+		Synpcc7942_0024	0.51	-0.6
24,795	+		Synpcc7942_0024	0.52	+0.4
24,800	+		Synpcc7942_0024	0.52	+1.1
24,803	-		Synpcc7942_0024	0.52	-0.5
24,855	+		Synpcc7942_0024	0.57	+2.5
24,855	+		Synpcc7942_0024	0.57	-1.1
24,863	-		Synpcc7942_0024	0.57	+2.5
24,890	+		Synpcc7942_0024	0.60	-0.7
24,900	-		Synpcc7942_0024	0.60	-0.9
24,962	-		Synpcc7942_0024	0.66	+2.8
24,964	+		Synpcc7942_0024	0.66	-1.4
24,972	-		Synpcc7942_0024	0.66	-0.5
24,972	-		Synpcc7942_0024	0.66	+3.0
24,988	+		Synpcc7942_0024	0.68	+3.0
25,007	+		Synpcc7942_0024	0.69	+2.8
25,032	-		Synpcc7942_0024	0.71	-0.6
25,033	-		Synpcc7942_0024	0.72	-0.4
25,054	+		Synpcc7942_0024	0.73	+2.5
25,056	+		Synpcc7942_0024	0.73	+2.2
25,056	+		Synpcc7942_0024	0.73	-0.9
25,064	-		Synpcc7942_0024	0.74	-2.8
25,064	-		Synpcc7942_0024	0.74	+2.4
25,064	-		Synpcc7942_0024	0.74	-2.9
25,081	+		Synpcc7942_0024	0.76	+2.4
25,081	+		Synpcc7942_0024	0.76	-2.1
25,081	-		Synpcc7942_0024	0.76	+2.8
25,088	+		Synpcc7942_0024	0.76	-1.4
25,088	+		Synpcc7942_0024	0.76	+0.1
25,089	-		Synpcc7942_0024	0.76	+2.9
25,093	+		Synpcc7942_0024	0.77	-1.2
25,098	+		Synpcc7942_0024	0.77	+2.8
25,101	-		Synpcc7942_0024	0.77	-2.7
25,101	-		Synpcc7942_0024	0.77	-2.4
25,124	+		Synpcc7942_0024	0.79	+0.8
25,131	-		Synpcc7942_0024	0.80	+1.0
25,131	-		Synpcc7942_0024	0.80	+2.5
25,132	-		Synpcc7942_0024	0.80	+2.2
25,137	-		Synpcc7942_0024	0.80	+0.3
25,150	+		Synpcc7942_0024	0.81	+1.5
25,150	+		Synpcc7942_0024	0.81	-1.0
25,174	-		Synpcc7942_0024	0.83	+0.6
25,194	-		Synpcc7942_0024	0.85	-0.4
25,211	-		Synpcc7942_0024	0.86	+0.4
25,226	+		Synpcc7942_0024	0.88	-1.8
25,226	+		Synpcc7942_0024	0.88	-2.1
25,226	+		Synpcc7942_0024	0.88	-0.5
25,236	-		Synpcc7942_0024	0.89	-2.6
25,237	+		Synpcc7942_0024	0.89	-1.1
25,238	+		Synpcc7942_0024	0.89	+2.0
25,246	-		Synpcc7942_0024	0.89	+2.6
25,246	-		Synpcc7942_0024	0.89	-2.6
25,246	-		Synpcc7942_0024	0.89	-2.8
25,290	+				-3.1
25,302	+				-2.7
25,309	+				-0.9
25,309	+				-0.7
25,309	+				-0.5
25,317	-				-3.2
25,317	-				-1.8
25,317	-				-0.5
25,317	-				+1.8
25,318	-				-0.8
25,328	+				-0.9
25,328	+				-0.5
25,342	+				-0.9
25,342	+				-0.0
25,350	-				-1.2
25,360	-				-0.4
25,364	+				-1.3
25,365	-				-1.0
25,372	-				+4.0
25,372	-				-1.7
25,372	-				+1.5
25,378	+				-3.2
25,386	-				-1.4
25,421	+				+2.1
25,429	-				-0.8
25,451	-				-0.8
25,477	-				-1.5
25,507	+				-0.8
25,507	+				+1.5
25,514	+				-1.2
25,531	+				+1.5
25,551	+				+2.1
25,559	-				-1.3
25,601	-		Synpcc7942_0025	0.11	-0.5
25,606	-		Synpcc7942_0025	0.11	-0.0
25,610	+		Synpcc7942_0025	0.11	+1.0
25,645	+		Synpcc7942_0025	0.13	+1.5
25,648	-		Synpcc7942_0025	0.14	+1.0
25,653	-		Synpcc7942_0025	0.14	-1.0
25,653	-		Synpcc7942_0025	0.14	-0.0
25,660	+		Synpcc7942_0025	0.14	-0.8
25,692	-		Synpcc7942_0025	0.16	+2.0
25,692	-		Synpcc7942_0025	0.16	+2.0
25,705	+		Synpcc7942_0025	0.17	+1.5
25,713	-		Synpcc7942_0025	0.17	+2.5
25,713	-		Synpcc7942_0025	0.17	-0.8
25,735	-		Synpcc7942_0025	0.19	-1.9
25,740	+		Synpcc7942_0025	0.19	+2.1
25,741	+		Synpcc7942_0025	0.19	-3.5
25,742	+		Synpcc7942_0025	0.19	-0.2
25,748	-		Synpcc7942_0025	0.19	+1.5
25,751	+		Synpcc7942_0025	0.20	+0.2
25,756	+		Synpcc7942_0025	0.20	+0.8
25,759	-		Synpcc7942_0025	0.20	-0.6
25,761	+		Synpcc7942_0025	0.20	-0.5
25,761	+		Synpcc7942_0025	0.20	-2.3
25,764	-		Synpcc7942_0025	0.20	-1.0
25,764	-		Synpcc7942_0025	0.20	-1.3
25,769	-		Synpcc7942_0025	0.21	+0.2
25,769	-		Synpcc7942_0025	0.21	-2.0
25,769	-		Synpcc7942_0025	0.21	+0.5
25,769	-		Synpcc7942_0025	0.21	+0.5
25,769	-		Synpcc7942_0025	0.21	+1.5
25,774	-		Synpcc7942_0025	0.21	+3.5
25,776	-		Synpcc7942_0025	0.21	-0.4
25,794	-		Synpcc7942_0025	0.22	-0.0
25,811	+		Synpcc7942_0025	0.23	-2.8
25,814	-		Synpcc7942_0025	0.23	-2.2
25,814	-		Synpcc7942_0025	0.23	+2.5
25,814	-		Synpcc7942_0025	0.23	-0.3
25,817	+		Synpcc7942_0025	0.23	-0.9
25,873	-		Synpcc7942_0025	0.27	-3.9
25,894	+		Synpcc7942_0025	0.28	+1.5
25,905	+		Synpcc7942_0025	0.29	+1.5
25,906	-				+0.2
25,906	-		Synpcc7942_0025	0.29	-1.2
25,906	-		Synpcc7942_0025	0.29	+0.5
25,908	+		Synpcc7942_0025	0.29	+1.8
25,910	+		Synpcc7942_0025	0.29	+1.4
25,924	-		Synpcc7942_0025	0.30	-0.7
25,936	-		Synpcc7942_0025	0.30	+0.1
25,955	+		Synpcc7942_0025	0.32	-0.5
25,955	+		Synpcc7942_0025	0.32	+2.4
25,955	+		Synpcc7942_0025	0.32	-1.8
25,959	-		Synpcc7942_0025	0.32	-2.0
25,963	-		Synpcc7942_0025	0.32	-1.1
25,963	-		Synpcc7942_0025	0.32	-2.2
25,963	-		Synpcc7942_0025	0.32	+2.1
25,966	+		Synpcc7942_0025	0.32	-0.8
25,966	+		Synpcc7942_0025	0.32	-1.2
25,966	+		Synpcc7942_0025	0.32	+0.2
25,966	+		Synpcc7942_0025	0.32	-0.8
25,966	+		Synpcc7942_0025	0.32	-0.5
25,966	+		Synpcc7942_0025	0.32	+2.5
25,966	+		Synpcc7942_0025	0.32	-0.6
25,966	+		Synpcc7942_0025	0.32	-1.9
25,966	+		Synpcc7942_0025	0.32	-0.3
25,966	+		Synpcc7942_0025	0.32	-0.7
25,966	+		Synpcc7942_0025	0.32	+0.5
25,974	-		Synpcc7942_0025	0.33	+1.2
25,974	-		Synpcc7942_0025	0.33	+0.5
25,974	-		Synpcc7942_0025	0.33	-0.0
25,974	-		Synpcc7942_0025	0.33	-1.0
25,991	+		Synpcc7942_0025	0.34	+0.2
26,021	+		Synpcc7942_0025	0.35	-0.9
26,053	-		Synpcc7942_0025	0.37	+0.3
26,055	-		Synpcc7942_0025	0.37	-2.0
26,070	+		Synpcc7942_0025	0.38	-1.0
26,078	-		Synpcc7942_0025	0.39	-1.0
26,078	-		Synpcc7942_0025	0.39	+3.0
26,101	+		Synpcc7942_0025	0.40	+0.5
26,113	+		Synpcc7942_0025	0.41	-0.6
26,126	-		Synpcc7942_0025	0.42	+0.8
26,126	-		Synpcc7942_0025	0.42	-1.0
26,137	-		Synpcc7942_0025	0.42	-0.8
26,137	-		Synpcc7942_0025	0.42	+2.1
26,147	-		Synpcc7942_0025	0.43	+0.5
26,159	-		Synpcc7942_0025	0.44	+1.2
26,170	-		Synpcc7942_0025	0.44	-0.2
26,201	+		Synpcc7942_0025	0.46	+1.5
26,209	-		Synpcc7942_0025	0.46	-1.0
26,220	+		Synpcc7942_0025	0.47	-1.9
26,228	-		Synpcc7942_0025	0.48	-0.7
26,228	-		Synpcc7942_0025	0.48	-0.0
26,248	-		Synpcc7942_0025	0.49	+3.1
26,305	+		Synpcc7942_0025	0.52	-0.9
26,311	+		Synpcc7942_0025	0.52	+0.3
26,313	-		Synpcc7942_0025	0.53	-1.4
26,325	-		Synpcc7942_0025	0.53	-0.5
26,334	+		Synpcc7942_0025	0.54	-0.6