Strain Fitness in Synechococcus elongatus PCC 7942 around Synpcc7942_2550

Experiment: Biofilm in Fresh BG11R in Flasks with Spin rep 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Biofilm in Fresh BG11R in Flasks with Spin rep 1
2,628,051	+				+0.9
2,628,051	+				-0.6
2,628,051	+				-0.0
2,628,051	+				+0.3
2,628,059	-				+1.7
2,628,059	-				-1.2
2,628,059	-				-1.2
2,628,059	-				-2.0
2,628,059	-				-2.4
2,628,059	-				-0.7
2,628,085	+				-1.3
2,628,090	+				+0.9
2,628,102	+				-1.4
2,628,108	+				+0.2
2,628,187	-		Synpcc7942_2549	0.33	-0.6
2,628,209	-		Synpcc7942_2549	0.41	-1.1
2,628,212	+		Synpcc7942_2549	0.42	-0.6
2,628,222	+		Synpcc7942_2549	0.46	-0.5
2,628,234	+		Synpcc7942_2549	0.51	-1.0
2,628,267	+		Synpcc7942_2549	0.64	+0.9
2,628,284	+		Synpcc7942_2549	0.71	+0.9
2,628,343	+				-0.6
2,628,343	+				+0.9
2,628,343	+				-1.4
2,628,343	+				-0.1
2,628,343	+				-0.4
2,628,343	+				-2.8
2,628,351	-				-0.1
2,628,351	-				-1.3
2,628,351	-				-1.4
2,628,351	-				-2.9
2,628,351	-				+0.1
2,628,373	+				-0.9
2,628,373	+				+0.9
2,628,391	-				-0.8
2,628,397	+				+0.6
2,628,397	+				+0.8
2,628,405	-				+0.7
2,628,416	+				+0.9
2,628,429	-				+0.9
2,628,433	+				-3.5
2,628,433	+				-2.8
2,628,441	-				-0.1
2,628,441	-				-0.9
2,628,441	-				-0.6
2,628,483	+				-0.2
2,628,500	+				-2.9
2,628,520	+				-4.6
2,628,556	+				+0.1
2,628,564	-				+0.6
2,628,564	-				-0.3
2,628,564	-				+0.9
2,628,566	+				+2.7
2,628,566	+				+2.4
2,628,574	-				+0.9
2,628,574	-				-4.0
2,628,574	-				-3.3
2,628,576	+				+0.4
2,628,617	+		Synpcc7942_2550	0.12	-2.5
2,628,621	-		Synpcc7942_2550	0.12	-2.5
2,628,622	+		Synpcc7942_2550	0.13	+0.7
2,628,622	-		Synpcc7942_2550	0.13	-1.3
2,628,627	+		Synpcc7942_2550	0.13	-1.9
2,628,641	+		Synpcc7942_2550	0.14	-2.0
2,628,641	+		Synpcc7942_2550	0.14	-0.5
2,628,641	-		Synpcc7942_2550	0.14	-1.7
2,628,649	-		Synpcc7942_2550	0.15	-1.6
2,628,716	+		Synpcc7942_2550	0.21	-0.8
2,628,724	-		Synpcc7942_2550	0.22	-0.6
2,628,726	+		Synpcc7942_2550	0.22	+0.7
2,628,771	+		Synpcc7942_2550	0.26	-0.1
2,628,799	+		Synpcc7942_2550	0.29	-0.8
2,628,805	-		Synpcc7942_2550	0.30	-3.1
2,628,805	-		Synpcc7942_2550	0.30	-3.0
2,628,871	+		Synpcc7942_2550	0.36	-2.1
2,628,888	+		Synpcc7942_2550	0.37	-1.9
2,628,910	-		Synpcc7942_2550	0.39	+0.4
2,628,922	-		Synpcc7942_2550	0.41	-0.1
2,628,943	-		Synpcc7942_2550	0.42	+1.9
2,628,946	+		Synpcc7942_2550	0.43	-1.6
2,628,946	+		Synpcc7942_2550	0.43	-1.7
2,628,953	-				-0.6
2,628,954	-		Synpcc7942_2550	0.43	+0.4
2,628,956	-		Synpcc7942_2550	0.44	-1.0
2,628,969	+		Synpcc7942_2550	0.45	-1.1
2,628,982	+		Synpcc7942_2550	0.46	-2.6
2,628,988	-		Synpcc7942_2550	0.47	-2.1
2,629,014	+		Synpcc7942_2550	0.49	+0.9
2,629,056	-		Synpcc7942_2550	0.53	-0.7
2,629,061	+		Synpcc7942_2550	0.53	-0.9
2,629,069	-		Synpcc7942_2550	0.54	-0.1
2,629,069	-		Synpcc7942_2550	0.54	-2.2
2,629,084	+		Synpcc7942_2550	0.56	+0.9
2,629,151	+		Synpcc7942_2550	0.62	-2.1
2,629,151	+		Synpcc7942_2550	0.62	-2.4
2,629,152	+				-1.4
2,629,159	-		Synpcc7942_2550	0.63	-0.6
2,629,159	-		Synpcc7942_2550	0.63	-0.2
2,629,159	-		Synpcc7942_2550	0.63	-0.6
2,629,160	-		Synpcc7942_2550	0.63	-1.4
2,629,184	-		Synpcc7942_2550	0.65	-0.6
2,629,189	+		Synpcc7942_2550	0.65	-1.4
2,629,189	+		Synpcc7942_2550	0.65	-1.4
2,629,189	+		Synpcc7942_2550	0.65	+0.9
2,629,189	+		Synpcc7942_2550	0.65	-0.8
2,629,189	+		Synpcc7942_2550	0.65	+0.2
2,629,189	+		Synpcc7942_2550	0.65	-0.4
2,629,197	-		Synpcc7942_2550	0.66	-0.3
2,629,197	-		Synpcc7942_2550	0.66	+0.1
2,629,197	-		Synpcc7942_2550	0.66	-1.5
2,629,197	-		Synpcc7942_2550	0.66	+0.9
2,629,197	-		Synpcc7942_2550	0.66	-0.1
2,629,217	-		Synpcc7942_2550	0.68	-1.9
2,629,225	-		Synpcc7942_2550	0.69	+0.2
2,629,245	+		Synpcc7942_2550	0.71	+1.9
2,629,253	-		Synpcc7942_2550	0.71	-1.2
2,629,370	+		Synpcc7942_2550	0.82	+0.9
2,629,389	-		Synpcc7942_2550	0.84	-0.4
2,629,390	-		Synpcc7942_2550	0.84	-1.1
2,629,404	-		Synpcc7942_2550	0.85	+0.9
2,629,413	-		Synpcc7942_2550	0.86	-1.2
2,629,437	+		Synpcc7942_2550	0.88	-1.4
2,629,445	-		Synpcc7942_2550	0.89	-2.0
2,629,456	+				-0.1
2,629,456	+				-0.2
2,629,456	+				-1.1
2,629,456	+				-0.1
2,629,464	-				-0.6
2,629,464	-				-3.1
2,629,466	+				+1.4
2,629,474	-				-2.9
2,629,480	+				-1.7
2,629,480	+				+2.5
2,629,485	+				-1.1
2,629,488	-				+1.7
2,629,493	+				+0.9
2,629,504	+				+1.9
2,629,546	-				-0.9
2,629,555	+				+0.9
2,629,568	-				+0.6
2,629,601	-				-0.9
2,629,611	-				-3.1
2,629,637	-				-2.6
2,629,637	-				+2.1
2,629,682	+				-0.1
2,629,682	+				+0.4
2,629,709	+				+2.0
2,629,716	+				-0.8
2,629,717	-				+0.9
2,629,741	-				-0.8
2,629,742	-				-1.7
2,629,755	-				+0.7
2,629,758	-				-2.9
2,629,771	-				+0.1
2,629,792	+				-0.9
2,629,798	-				+0.4
2,629,811	-				-1.6
2,629,829	+				-1.8
2,629,829	+				-0.1
2,629,829	+				+0.9
2,629,829	+				+0.9
2,629,829	+				+0.8
2,629,834	+				-1.5
2,629,837	-				+1.2
2,629,837	-				-2.6
2,629,837	-				+0.4
2,629,837	-				-1.3
2,629,837	-				-2.0
2,629,906	+				+0.9
2,629,933	-				+0.1
2,629,974	+				-0.0
2,629,975	+				-0.9
2,629,975	+				-2.6
2,629,983	-	hypF	Synpcc7942_2551	0.10	-0.9
2,629,983	-	hypF	Synpcc7942_2551	0.10	-0.9
2,629,983	-	hypF	Synpcc7942_2551	0.10	-1.1
2,629,983	-	hypF	Synpcc7942_2551	0.10	+1.5
2,629,983	-	hypF	Synpcc7942_2551	0.10	-0.3
2,629,983	-	hypF	Synpcc7942_2551	0.10	-2.0
2,629,983	-	hypF	Synpcc7942_2551	0.10	-0.9
2,630,006	-	hypF	Synpcc7942_2551	0.11	-1.1
2,630,048	+	hypF	Synpcc7942_2551	0.13	+0.9
2,630,053	+	hypF	Synpcc7942_2551	0.13	-0.6
2,630,053	+	hypF	Synpcc7942_2551	0.13	-0.6
2,630,061	-	hypF	Synpcc7942_2551	0.13	-1.1
2,630,112	-	hypF	Synpcc7942_2551	0.16	+2.9
2,630,154	-	hypF	Synpcc7942_2551	0.17	-1.9
2,630,197	-	hypF	Synpcc7942_2551	0.19	-0.1
2,630,211	+	hypF	Synpcc7942_2551	0.20	-1.1
2,630,246	-				-2.1
2,630,293	-	hypF	Synpcc7942_2551	0.23	-2.0
2,630,335	-	hypF	Synpcc7942_2551	0.25	+0.8
2,630,345	+	hypF	Synpcc7942_2551	0.26	+0.9
2,630,368	-	hypF	Synpcc7942_2551	0.27	-1.9
2,630,374	+	hypF	Synpcc7942_2551	0.27	-0.8
2,630,374	+	hypF	Synpcc7942_2551	0.27	+2.5
2,630,385	+	hypF	Synpcc7942_2551	0.27	-2.8
2,630,388	-	hypF	Synpcc7942_2551	0.28	-2.1
2,630,388	-	hypF	Synpcc7942_2551	0.28	-1.3
2,630,388	-	hypF	Synpcc7942_2551	0.28	+0.5
2,630,420	+	hypF	Synpcc7942_2551	0.29	+1.0
2,630,420	+	hypF	Synpcc7942_2551	0.29	-0.7
2,630,422	+	hypF	Synpcc7942_2551	0.29	+0.7
2,630,428	-	hypF	Synpcc7942_2551	0.29	-1.3
2,630,428	-	hypF	Synpcc7942_2551	0.29	-1.1
2,630,430	-	hypF	Synpcc7942_2551	0.29	-1.4
2,630,437	+	hypF	Synpcc7942_2551	0.30	+1.6
2,630,445	-	hypF	Synpcc7942_2551	0.30	-0.1
2,630,449	+	hypF	Synpcc7942_2551	0.30	-0.6
2,630,451	-	hypF	Synpcc7942_2551	0.30	+2.1
2,630,459	+	hypF	Synpcc7942_2551	0.31	+1.9
2,630,465	+	hypF	Synpcc7942_2551	0.31	-0.6
2,630,487	-				+0.9
2,630,492	-	hypF	Synpcc7942_2551	0.32	+1.8
2,630,529	-	hypF	Synpcc7942_2551	0.34	+0.9
2,630,531	+	hypF	Synpcc7942_2551	0.34	+0.4