Strain Fitness in Synechococcus elongatus PCC 7942 around Synpcc7942_2388

Experiment: Biofilm in Fresh BG11R in Flasks with Spin rep 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Biofilm in Fresh BG11R in Flasks with Spin rep 1
2,458,220	+		Synpcc7942_2387	0.55	-0.1
2,458,231	+		Synpcc7942_2387	0.56	-2.9
2,458,263	+		Synpcc7942_2387	0.58	+0.9
2,458,271	-		Synpcc7942_2387	0.58	-1.1
2,458,295	-		Synpcc7942_2387	0.59	-1.7
2,458,322	-		Synpcc7942_2387	0.60	+0.5
2,458,325	+		Synpcc7942_2387	0.61	-1.7
2,458,378	+		Synpcc7942_2387	0.63	-2.1
2,458,386	-		Synpcc7942_2387	0.64	-1.0
2,458,388	+		Synpcc7942_2387	0.64	-3.1
2,458,388	+		Synpcc7942_2387	0.64	-1.1
2,458,388	+		Synpcc7942_2387	0.64	-0.6
2,458,396	-		Synpcc7942_2387	0.64	-2.1
2,458,396	-				+1.9
2,458,396	-		Synpcc7942_2387	0.64	-0.8
2,458,453	+		Synpcc7942_2387	0.67	+0.7
2,458,475	-		Synpcc7942_2387	0.68	-0.1
2,458,488	+		Synpcc7942_2387	0.69	+0.9
2,458,488	+		Synpcc7942_2387	0.69	-0.5
2,458,607	+		Synpcc7942_2387	0.75	-0.8
2,458,655	+		Synpcc7942_2387	0.77	-1.0
2,458,655	+		Synpcc7942_2387	0.77	-0.4
2,458,655	+		Synpcc7942_2387	0.77	-1.6
2,458,677	+		Synpcc7942_2387	0.78	+1.7
2,458,725	-		Synpcc7942_2387	0.80	-1.1
2,458,747	-		Synpcc7942_2387	0.82	-1.1
2,458,798	-		Synpcc7942_2387	0.84	-4.2
2,458,815	-		Synpcc7942_2387	0.85	+0.4
2,458,858	-		Synpcc7942_2387	0.87	-3.3
2,458,888	+		Synpcc7942_2387	0.89	+0.6
2,459,036	+				-2.5
2,459,038	+				+0.9
2,459,131	+				-3.8
2,459,169	-				+1.5
2,459,247	+				-0.1
2,459,247	+				+1.5
2,459,247	+				-0.9
2,459,247	+				+1.7
2,459,250	-				-0.8
2,459,255	-				-2.2
2,459,365	-	oxdC	Synpcc7942_2388	0.17	-2.4
2,459,371	-	oxdC	Synpcc7942_2388	0.18	-2.0
2,459,563	+	oxdC	Synpcc7942_2388	0.34	-1.1
2,459,563	+	oxdC	Synpcc7942_2388	0.34	-2.7
2,459,569	-	oxdC	Synpcc7942_2388	0.35	+0.9
2,459,634	+	oxdC	Synpcc7942_2388	0.40	-0.6
2,459,634	+	oxdC	Synpcc7942_2388	0.40	-0.1
2,459,642	-	oxdC	Synpcc7942_2388	0.41	-1.0
2,459,642	-	oxdC	Synpcc7942_2388	0.41	-0.6
2,459,667	-	oxdC	Synpcc7942_2388	0.43	+0.2
2,459,691	+	oxdC	Synpcc7942_2388	0.45	-1.8
2,459,699	-	oxdC	Synpcc7942_2388	0.46	-0.6
2,459,794	+	oxdC	Synpcc7942_2388	0.54	-0.0
2,459,796	+	oxdC	Synpcc7942_2388	0.54	-1.0
2,460,075	+	oxdC	Synpcc7942_2388	0.78	-2.2
2,460,187	-	oxdC	Synpcc7942_2388	0.88	-2.9
2,460,260	-				-1.6
2,460,264	+				+1.9
2,460,384	+				-1.5
2,460,392	-				+3.7
2,460,392	-				-1.1
2,460,392	-				+0.9
2,460,473	+				+0.4
2,460,621	+				-0.1
2,460,624	-				-0.1
2,460,665	+				-4.1
2,460,729	-		Synpcc7942_2389	0.16	-1.6
2,460,735	+		Synpcc7942_2389	0.17	+1.9
2,460,739	+		Synpcc7942_2389	0.17	+0.9
2,460,745	+		Synpcc7942_2389	0.18	-0.4
2,460,745	+		Synpcc7942_2389	0.18	+0.0
2,460,745	+		Synpcc7942_2389	0.18	-1.1
2,460,745	+		Synpcc7942_2389	0.18	-1.7
2,460,745	+		Synpcc7942_2389	0.18	+0.6
2,460,753	-		Synpcc7942_2389	0.19	-0.9
2,460,784	-		Synpcc7942_2389	0.23	-0.4
2,460,789	-		Synpcc7942_2389	0.23	+0.4
2,460,793	+		Synpcc7942_2389	0.24	+0.5
2,460,818	+		Synpcc7942_2389	0.27	+0.9
2,460,821	+		Synpcc7942_2389	0.27	-0.8
2,460,826	-		Synpcc7942_2389	0.28	-0.6
2,460,835	+		Synpcc7942_2389	0.29	-1.0
2,460,866	+		Synpcc7942_2389	0.33	-3.4
2,460,874	-				-0.9
2,460,898	-		Synpcc7942_2389	0.37	-1.6
2,460,909	+		Synpcc7942_2389	0.38	-2.0
2,460,927	-		Synpcc7942_2389	0.41	-1.3
2,460,927	-		Synpcc7942_2389	0.41	-1.6
2,460,927	-		Synpcc7942_2389	0.41	-1.2
2,460,927	-		Synpcc7942_2389	0.41	-0.8
2,460,930	+		Synpcc7942_2389	0.41	+0.6
2,460,941	+		Synpcc7942_2389	0.42	-1.7
2,460,973	-		Synpcc7942_2389	0.46	-2.2
2,460,973	-		Synpcc7942_2389	0.46	+0.2
2,460,973	-		Synpcc7942_2389	0.46	-2.3
2,461,000	-		Synpcc7942_2389	0.50	-0.5
2,461,036	+		Synpcc7942_2389	0.54	-1.4
2,461,043	+		Synpcc7942_2389	0.55	-0.6
2,461,043	+		Synpcc7942_2389	0.55	-1.6
2,461,044	-		Synpcc7942_2389	0.55	+1.1
2,461,046	-		Synpcc7942_2389	0.56	-1.2
2,461,053	-		Synpcc7942_2389	0.56	+3.1
2,461,063	-		Synpcc7942_2389	0.58	+0.9
2,461,066	+		Synpcc7942_2389	0.58	-0.1
2,461,085	-		Synpcc7942_2389	0.60	-1.6
2,461,103	+		Synpcc7942_2389	0.63	-1.4
2,461,103	+		Synpcc7942_2389	0.63	-0.6
2,461,103	+		Synpcc7942_2389	0.63	-2.0
2,461,103	+		Synpcc7942_2389	0.63	-1.9
2,461,111	-		Synpcc7942_2389	0.64	-1.3
2,461,111	-		Synpcc7942_2389	0.64	+0.9
2,461,111	-		Synpcc7942_2389	0.64	-0.6
2,461,111	-		Synpcc7942_2389	0.64	-1.4
2,461,116	+		Synpcc7942_2389	0.64	+2.5
2,461,137	+		Synpcc7942_2389	0.67	-0.7
2,461,156	-		Synpcc7942_2389	0.69	-0.1
2,461,198	+		Synpcc7942_2389	0.75	-3.0
2,461,224	+		Synpcc7942_2389	0.78	+0.4