Strain Fitness in Synechococcus elongatus PCC 7942 around Synpcc7942_2336

Experiment: Biofilm in Fresh BG11R in Flasks with Spin rep 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Biofilm in Fresh BG11R in Flasks with Spin rep 1
2,403,217	-	fbp	Synpcc7942_2335	0.29	-0.9
2,403,264	-	fbp	Synpcc7942_2335	0.33	+1.3
2,403,291	+	fbp	Synpcc7942_2335	0.36	+0.9
2,403,291	+	fbp	Synpcc7942_2335	0.36	-0.1
2,403,291	+	fbp	Synpcc7942_2335	0.36	+1.9
2,403,291	+	fbp	Synpcc7942_2335	0.36	+0.9
2,403,299	-	fbp	Synpcc7942_2335	0.37	+1.4
2,403,304	-	fbp	Synpcc7942_2335	0.37	+0.9
2,403,306	+	fbp	Synpcc7942_2335	0.37	+0.1
2,403,314	-	fbp	Synpcc7942_2335	0.38	-1.5
2,403,321	+	fbp	Synpcc7942_2335	0.39	-0.3
2,403,321	+	fbp	Synpcc7942_2335	0.39	+2.4
2,403,321	+	fbp	Synpcc7942_2335	0.39	+2.3
2,403,321	+	fbp	Synpcc7942_2335	0.39	+0.5
2,403,336	+	fbp	Synpcc7942_2335	0.40	+0.3
2,403,338	+	fbp	Synpcc7942_2335	0.40	+0.9
2,403,346	+	fbp	Synpcc7942_2335	0.41	+1.9
2,403,354	-				+1.9
2,403,385	+	fbp	Synpcc7942_2335	0.45	+0.9
2,403,385	+	fbp	Synpcc7942_2335	0.45	-1.5
2,403,401	-	fbp	Synpcc7942_2335	0.46	+3.2
2,403,403	+	fbp	Synpcc7942_2335	0.47	-1.2
2,403,408	+				-0.5
2,403,416	-	fbp	Synpcc7942_2335	0.48	-1.7
2,403,416	-	fbp	Synpcc7942_2335	0.48	+0.9
2,403,474	+	fbp	Synpcc7942_2335	0.53	+0.9
2,403,489	+	fbp	Synpcc7942_2335	0.55	-2.3
2,403,489	+	fbp	Synpcc7942_2335	0.55	-0.5
2,403,507	-	fbp	Synpcc7942_2335	0.57	-1.7
2,403,567	+	fbp	Synpcc7942_2335	0.62	-0.7
2,403,570	+	fbp	Synpcc7942_2335	0.63	-0.7
2,403,570	+	fbp	Synpcc7942_2335	0.63	-3.1
2,403,575	+				-1.3
2,403,578	-	fbp	Synpcc7942_2335	0.63	-3.2
2,403,578	-	fbp	Synpcc7942_2335	0.63	+0.2
2,403,583	-	fbp	Synpcc7942_2335	0.64	-1.1
2,403,588	-	fbp	Synpcc7942_2335	0.64	+0.2
2,403,614	+	fbp	Synpcc7942_2335	0.67	+1.5
2,403,615	+	fbp	Synpcc7942_2335	0.67	-0.7
2,403,623	-	fbp	Synpcc7942_2335	0.68	+0.6
2,403,676	-	fbp	Synpcc7942_2335	0.73	-0.9
2,403,696	+	fbp	Synpcc7942_2335	0.75	-1.7
2,403,725	+	fbp	Synpcc7942_2335	0.78	-0.7
2,403,725	+	fbp	Synpcc7942_2335	0.78	+0.6
2,403,733	-	fbp	Synpcc7942_2335	0.78	-1.3
2,403,745	-	fbp	Synpcc7942_2335	0.80	-0.9
2,403,803	-	fbp	Synpcc7942_2335	0.85	+0.3
2,403,814	+	fbp	Synpcc7942_2335	0.86	-1.4
2,403,822	-	fbp	Synpcc7942_2335	0.87	-0.1
2,403,822	-	fbp	Synpcc7942_2335	0.87	+1.3
2,403,835	-	fbp	Synpcc7942_2335	0.88	+0.3
2,403,842	+	fbp	Synpcc7942_2335	0.89	-0.7
2,403,842	+	fbp	Synpcc7942_2335	0.89	+0.6
2,403,842	+	fbp	Synpcc7942_2335	0.89	-1.0
2,403,842	+	fbp	Synpcc7942_2335	0.89	+2.7
2,403,842	+	fbp	Synpcc7942_2335	0.89	+0.0
2,403,850	-	fbp	Synpcc7942_2335	0.90	+2.5
2,403,850	-	fbp	Synpcc7942_2335	0.90	-2.1
2,403,850	-	fbp	Synpcc7942_2335	0.90	-1.5
2,403,850	-	fbp	Synpcc7942_2335	0.90	-1.9
2,403,850	-	fbp	Synpcc7942_2335	0.90	-1.7
2,403,850	-	fbp	Synpcc7942_2335	0.90	-0.8
2,403,850	-	fbp	Synpcc7942_2335	0.90	+1.9
2,403,850	-				-2.5
2,403,856	+				-2.8
2,403,863	+				+0.9
2,403,883	-				+1.5
2,403,895	+				+0.9
2,403,908	-				+0.3
2,403,918	+				-0.3
2,403,926	-				-0.8
2,403,926	-				-0.8
2,403,944	+				+1.2
2,403,944	+				-0.9
2,403,947	-				-0.1
2,403,952	-				+1.3
2,403,967	+				+2.5
2,404,036	+				-1.5
2,404,040	-				-2.4
2,404,044	+				-0.1
2,404,053	+				+2.4
2,404,061	-				+1.9
2,404,068	+				-2.3
2,404,076	-				+1.3
2,404,076	-				-1.3
2,404,082	+				+0.9
2,404,175	+				+0.5
2,404,176	+				-1.3
2,404,177	+				+0.9
2,404,177	+				-1.4
2,404,177	+				+0.9
2,404,177	+				+0.3
2,404,185	-				-0.9
2,404,185	-				-0.8
2,404,185	-				+0.2
2,404,196	-				-1.9
2,404,214	+				-2.1
2,404,219	+				-1.0
2,404,222	-				-1.3
2,404,224	+				-1.0
2,404,224	+				-0.8
2,404,224	+				+1.1
2,404,227	-				-2.1
2,404,227	-				-1.9
2,404,227	-				-0.1
2,404,255	-		Synpcc7942_2336	0.22	-1.4
2,404,263	+		Synpcc7942_2336	0.27	-1.4
2,404,329	+		Synpcc7942_2336	0.65	-1.0
2,404,329	+		Synpcc7942_2336	0.65	-0.1
2,404,385	+				-1.3
2,404,388	+				-0.7
2,404,395	-				-0.9
2,404,411	+				-1.2
2,404,419	-				+1.1
2,404,419	-				-0.9
2,404,419	-				-1.8
2,404,419	-				+2.5
2,404,419	-				-0.7
2,404,419	-				-0.5
2,404,437	-				-2.9
2,404,460	-				-0.7
2,404,515	+				-1.5
2,404,530	+				-4.2
2,404,558	+				-1.5
2,404,566	-				-2.2
2,404,571	+				-1.4
2,404,579	-				-0.7
2,404,580	-				-2.6
2,404,603	-				+0.9
2,404,623	-				-1.0
2,404,625	-				-0.4
2,404,628	-				+2.7
2,404,648	+				-2.6
2,404,648	+				-1.7
2,404,648	+				-1.4
2,404,656	-				-1.8
2,404,674	-				-1.3
2,404,741	-		Synpcc7942_2337	0.15	-0.6
2,404,741	-		Synpcc7942_2337	0.15	+0.3
2,404,745	+		Synpcc7942_2337	0.16	+1.1
2,404,776	+		Synpcc7942_2337	0.19	-0.6
2,404,778	+		Synpcc7942_2337	0.19	-2.1
2,404,817	-		Synpcc7942_2337	0.23	+1.9
2,404,899	-		Synpcc7942_2337	0.32	-2.1
2,404,954	-		Synpcc7942_2337	0.37	-2.7
2,404,985	+		Synpcc7942_2337	0.41	-1.1
2,404,988	-		Synpcc7942_2337	0.41	-0.1
2,404,999	-		Synpcc7942_2337	0.42	+0.5
2,405,034	+		Synpcc7942_2337	0.46	-1.5
2,405,042	-		Synpcc7942_2337	0.47	-2.3
2,405,047	+		Synpcc7942_2337	0.47	-0.7
2,405,048	+		Synpcc7942_2337	0.47	-0.6
2,405,050	-		Synpcc7942_2337	0.47	-2.3
2,405,075	-		Synpcc7942_2337	0.50	+0.9
2,405,086	+		Synpcc7942_2337	0.51	-1.4
2,405,094	-		Synpcc7942_2337	0.52	-2.9
2,405,094	-		Synpcc7942_2337	0.52	-3.1
2,405,114	+		Synpcc7942_2337	0.54	+0.6
2,405,122	-		Synpcc7942_2337	0.55	+0.0
2,405,154	-		Synpcc7942_2337	0.58	-1.1
2,405,225	+		Synpcc7942_2337	0.66	-2.5
2,405,242	+		Synpcc7942_2337	0.68	-1.9
2,405,348	+		Synpcc7942_2337	0.79	-0.1
2,405,356	-		Synpcc7942_2337	0.80	+1.9