Strain Fitness in Synechococcus elongatus PCC 7942 around Synpcc7942_2124

Experiment: Biofilm in Fresh BG11R in Flasks with Spin rep 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Biofilm in Fresh BG11R in Flasks with Spin rep 1
2,204,997	-				-3.2
2,205,015	+	bcp	Synpcc7942_2124	0.11	-1.2
2,205,068	+	bcp	Synpcc7942_2124	0.16	-0.6
2,205,269	+	bcp	Synpcc7942_2124	0.37	-1.6
2,205,291	+	bcp	Synpcc7942_2124	0.39	-0.8
2,205,344	+	bcp	Synpcc7942_2124	0.45	-0.1
2,205,482	-	bcp	Synpcc7942_2124	0.59	-3.8
2,205,500	-	bcp	Synpcc7942_2124	0.61	-0.6
2,205,601	-	bcp	Synpcc7942_2124	0.71	-1.6
2,205,732	-	bcp	Synpcc7942_2124	0.85	+0.9
2,205,732	-	bcp	Synpcc7942_2124	0.85	-2.2
2,205,745	-	bcp	Synpcc7942_2124	0.86	-0.1
2,205,865	-				+0.8
2,205,874	+				+1.3
2,205,874	+				+0.9
2,205,881	+				-0.7
2,205,905	+				-2.1
2,205,905	+				-1.2
2,205,913	-				-1.1
2,205,925	+				+0.7
2,205,925	+				+0.4
2,205,930	+				-2.6
2,205,935	+				+1.8
2,205,935	+				-0.4
2,205,938	-				+1.9
2,205,940	+				-2.7
2,205,943	-				+2.5
2,205,943	-				+2.9
2,205,950	-				-1.3
2,205,961	+				-0.1
2,205,962	+				+0.9
2,205,962	+				+0.2
2,205,962	+				+1.3
2,205,970	-				+2.5
2,205,970	-				-0.1
2,205,970	-				-2.8
2,205,970	-				+0.5
2,205,985	+				-0.6
2,205,987	+				-1.0
2,206,005	-				-3.3
2,206,005	-				-2.2
2,206,017	-				-0.1
2,206,034	-				-1.4
2,206,038	+				-1.6
2,206,046	+		Synpcc7942_2125	0.11	-0.9
2,206,065	-		Synpcc7942_2125	0.16	+0.9
2,206,112	+		Synpcc7942_2125	0.27	+0.9
2,206,114	+		Synpcc7942_2125	0.28	-1.2
2,206,127	-				-0.8
2,206,132	-		Synpcc7942_2125	0.32	-2.4
2,206,132	-		Synpcc7942_2125	0.32	-0.6
2,206,151	-		Synpcc7942_2125	0.37	-0.4
2,206,155	-		Synpcc7942_2125	0.38	-2.5
2,206,185	-		Synpcc7942_2125	0.46	-0.6
2,206,192	+		Synpcc7942_2125	0.47	-3.4
2,206,200	-		Synpcc7942_2125	0.49	-0.8
2,206,200	-		Synpcc7942_2125	0.49	-2.5
2,206,210	-		Synpcc7942_2125	0.52	-0.6
2,206,245	+		Synpcc7942_2125	0.60	-0.1
2,206,245	+		Synpcc7942_2125	0.60	-0.6
2,206,253	-		Synpcc7942_2125	0.62	-0.4
2,206,267	+		Synpcc7942_2125	0.66	+1.9
2,206,267	+		Synpcc7942_2125	0.66	-0.3
2,206,267	+		Synpcc7942_2125	0.66	-0.4
2,206,290	+				+0.2
2,206,291	+		Synpcc7942_2125	0.72	-0.1
2,206,316	-		Synpcc7942_2125	0.78	+3.9
2,206,373	-				-2.9
2,206,395	-				-0.1
2,206,398	+				-1.8
2,206,431	-				+0.2
2,206,433	+				-0.6
2,206,433	+				-3.4
2,206,433	+				+2.5
2,206,433	+				-2.5
2,206,441	-		Synpcc7942_2126	0.10	-0.7
2,206,441	-		Synpcc7942_2126	0.10	-3.3
2,206,441	-		Synpcc7942_2126	0.10	+0.9
2,206,441	-		Synpcc7942_2126	0.10	+0.9
2,206,452	-		Synpcc7942_2126	0.13	+0.6
2,206,456	+		Synpcc7942_2126	0.14	+0.9
2,206,464	-		Synpcc7942_2126	0.16	-1.6
2,206,471	-		Synpcc7942_2126	0.18	+0.9
2,206,519	-		Synpcc7942_2126	0.29	-1.9
2,206,519	-		Synpcc7942_2126	0.29	-1.5
2,206,524	+		Synpcc7942_2126	0.31	-0.8
2,206,532	-		Synpcc7942_2126	0.33	+0.9
2,206,555	+		Synpcc7942_2126	0.38	-0.1
2,206,589	-		Synpcc7942_2126	0.47	-0.6
2,206,600	-		Synpcc7942_2126	0.49	-0.1
2,206,614	-		Synpcc7942_2126	0.53	+2.3
2,206,683	+		Synpcc7942_2126	0.70	+0.9
2,206,683	+		Synpcc7942_2126	0.70	+0.3
2,206,683	+		Synpcc7942_2126	0.70	+0.4
2,206,691	-		Synpcc7942_2126	0.72	+2.5
2,206,691	-		Synpcc7942_2126	0.72	-3.9
2,206,691	-		Synpcc7942_2126	0.72	-0.4
2,206,693	+		Synpcc7942_2126	0.72	+1.4
2,206,700	-		Synpcc7942_2126	0.74	+0.7
2,206,717	-		Synpcc7942_2126	0.78	-0.5
2,206,728	-		Synpcc7942_2126	0.81	-0.9
2,206,728	-		Synpcc7942_2126	0.81	-1.4
2,206,734	+		Synpcc7942_2126	0.82	-1.2
2,206,742	-		Synpcc7942_2126	0.84	+0.6
2,206,742	-		Synpcc7942_2126	0.84	-0.1
2,206,742	-		Synpcc7942_2126	0.84	-0.2
2,206,817	+				-0.9
2,206,817	+				+1.9
2,206,822	-				+0.2
2,206,825	-				-0.6
2,206,825	-				+1.4
2,206,836	+				+0.5
2,206,838	-				-1.1
2,206,844	-				-0.8
2,206,858	+				-1.4
2,206,858	+				+0.2
2,206,858	+				-1.7
2,206,858	+				+0.9