Strain Fitness in Synechococcus elongatus PCC 7942 around Synpcc7942_1947

Experiment: Biofilm in Fresh BG11R in Flasks with Spin rep 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Biofilm in Fresh BG11R in Flasks with Spin rep 1
2,021,115	-	uvrC	Synpcc7942_1945	0.84	+1.9
2,021,200	-	uvrC	Synpcc7942_1945	0.88	-1.2
2,021,397	+				+0.2
2,021,400	+				-0.1
2,021,483	+				+0.7
2,021,483	+				-2.5
2,021,490	+				-1.2
2,021,491	-				+0.7
2,021,496	-				+0.6
2,021,498	-				-0.4
2,021,584	+		Synpcc7942_1946	0.19	-0.7
2,021,633	-		Synpcc7942_1946	0.29	+1.3
2,021,641	+		Synpcc7942_1946	0.31	-2.2
2,021,644	-		Synpcc7942_1946	0.31	-0.8
2,021,644	-		Synpcc7942_1946	0.31	-1.4
2,021,649	-		Synpcc7942_1946	0.33	+1.9
2,021,700	-		Synpcc7942_1946	0.43	+0.3
2,021,714	-		Synpcc7942_1946	0.46	-1.2
2,021,761	+		Synpcc7942_1946	0.56	+1.9
2,021,769	-		Synpcc7942_1946	0.57	-0.1
2,021,786	+		Synpcc7942_1946	0.61	+0.2
2,021,793	-		Synpcc7942_1946	0.62	-1.4
2,021,794	-		Synpcc7942_1946	0.63	-1.7
2,021,794	-		Synpcc7942_1946	0.63	+0.6
2,021,816	+		Synpcc7942_1946	0.67	-1.5
2,021,824	-				-1.2
2,021,835	+		Synpcc7942_1946	0.71	-1.2
2,021,871	-		Synpcc7942_1946	0.79	-2.5
2,021,872	-		Synpcc7942_1946	0.79	-0.2
2,021,890	+		Synpcc7942_1946	0.83	-1.0
2,021,909	+		Synpcc7942_1946	0.87	-2.8
2,021,919	+		Synpcc7942_1946	0.89	-0.5
2,021,920	+		Synpcc7942_1946	0.89	+0.3
2,021,944	-				-3.5
2,021,968	+				+1.5
2,022,013	+				+2.5
2,022,013	+				-1.1
2,022,018	+				-0.7
2,022,021	-				-0.1
2,022,058	-				-2.3
2,022,090	-				+2.1
2,022,101	-				+0.9
2,022,137	-				+0.9
2,022,137	-				-0.1
2,022,137	-				-0.7
2,022,137	-				-1.1
2,022,137	-				-2.6
2,022,137	-				-2.4
2,022,137	-				-1.1
2,022,137	-				-1.2
2,022,137	-				-2.0
2,022,164	-				+0.9
2,022,177	+				-0.1
2,022,177	+				+0.9
2,022,203	-				+0.9
2,022,209	+				+0.6
2,022,251	-		Synpcc7942_1947	0.11	-1.4
2,022,251	-		Synpcc7942_1947	0.11	-1.4
2,022,295	-		Synpcc7942_1947	0.14	+0.9
2,022,298	+		Synpcc7942_1947	0.14	+0.3
2,022,300	-		Synpcc7942_1947	0.15	+0.9
2,022,345	+		Synpcc7942_1947	0.18	-1.4
2,022,367	+		Synpcc7942_1947	0.19	-0.7
2,022,369	-		Synpcc7942_1947	0.19	-2.4
2,022,426	-		Synpcc7942_1947	0.23	+0.9
2,022,454	-		Synpcc7942_1947	0.25	+1.3
2,022,461	-		Synpcc7942_1947	0.26	-0.1
2,022,469	+		Synpcc7942_1947	0.26	-0.1
2,022,492	-		Synpcc7942_1947	0.28	-2.8
2,022,509	-		Synpcc7942_1947	0.29	+0.9
2,022,560	-		Synpcc7942_1947	0.32	-0.1
2,022,589	-		Synpcc7942_1947	0.34	-2.7
2,022,589	-		Synpcc7942_1947	0.34	-2.0
2,022,589	-		Synpcc7942_1947	0.34	-0.7
2,022,627	-		Synpcc7942_1947	0.37	+0.9
2,022,643	+		Synpcc7942_1947	0.38	-0.8
2,022,643	+		Synpcc7942_1947	0.38	-2.0
2,022,653	+		Synpcc7942_1947	0.39	+1.5
2,022,654	+		Synpcc7942_1947	0.39	-2.8
2,022,656	-		Synpcc7942_1947	0.39	+0.6
2,022,686	+		Synpcc7942_1947	0.41	-0.1
2,022,694	-		Synpcc7942_1947	0.42	+0.9
2,022,694	-		Synpcc7942_1947	0.42	+0.9
2,022,694	-		Synpcc7942_1947	0.42	-1.9
2,022,694	-		Synpcc7942_1947	0.42	+0.9
2,022,724	+		Synpcc7942_1947	0.44	-1.4
2,022,724	+		Synpcc7942_1947	0.44	-1.9
2,022,732	-		Synpcc7942_1947	0.44	+0.6
2,022,871	-		Synpcc7942_1947	0.54	+0.9
2,022,904	+		Synpcc7942_1947	0.56	-2.5
2,022,945	-		Synpcc7942_1947	0.59	+0.9
2,022,948	+		Synpcc7942_1947	0.59	-0.7
2,022,950	+		Synpcc7942_1947	0.59	+0.9
2,023,092	+		Synpcc7942_1947	0.69	-1.9
2,023,092	+		Synpcc7942_1947	0.69	+0.9
2,023,100	-		Synpcc7942_1947	0.70	-0.3
2,023,100	-		Synpcc7942_1947	0.70	-1.5
2,023,100	-		Synpcc7942_1947	0.70	-0.9
2,023,169	-		Synpcc7942_1947	0.74	+0.3
2,023,183	+		Synpcc7942_1947	0.75	+2.5
2,023,191	-		Synpcc7942_1947	0.76	+1.9
2,023,226	-		Synpcc7942_1947	0.78	+0.9
2,023,234	-		Synpcc7942_1947	0.79	+0.9
2,023,241	+		Synpcc7942_1947	0.79	+0.9
2,023,241	-		Synpcc7942_1947	0.79	-2.5
2,023,283	+		Synpcc7942_1947	0.82	-1.1
2,023,283	+		Synpcc7942_1947	0.82	-1.4
2,023,306	+		Synpcc7942_1947	0.84	-1.1
2,023,309	+		Synpcc7942_1947	0.84	-2.1
2,023,366	+		Synpcc7942_1947	0.88	+0.9
2,023,367	+		Synpcc7942_1947	0.88	+0.9
2,023,374	-		Synpcc7942_1947	0.88	+0.9
2,023,374	-		Synpcc7942_1947	0.88	+0.9
2,023,375	-		Synpcc7942_1947	0.89	-1.1
2,023,405	-				+2.5
2,023,476	-				+0.9
2,023,481	+				+0.9
2,023,524	-				+0.9
2,023,566	-				-0.1
2,023,575	+				-0.7
2,023,580	+				-0.2
2,023,580	+				+0.9
2,023,580	+				-1.3
2,023,580	+				-2.3
2,023,580	+				-0.9
2,023,580	+				+2.7
2,023,580	+				+1.2
2,023,582	+				+1.7
2,023,588	-				+2.2
2,023,601	-				+0.3
2,023,601	-				-1.1
2,023,610	+				-1.4
2,023,649	-				+0.9
2,023,688	+				-0.3
2,023,729	+		Synpcc7942_1948	0.14	+0.9
2,023,777	-		Synpcc7942_1948	0.34	-0.1
2,023,800	+		Synpcc7942_1948	0.43	+0.9
2,023,962	+				-3.1
2,023,963	-				-1.1
2,023,963	-				-0.5
2,023,967	+				-0.8
2,023,967	+				+1.3
2,023,967	+				-1.5
2,023,967	+				+0.1
2,023,967	+				-1.2
2,023,967	+				-2.3
2,023,975	-				-0.7
2,023,975	-				-1.6
2,023,975	-				-0.9
2,023,975	-				+1.4
2,023,975	-				-0.3
2,023,975	-				+1.4
2,023,997	-				-1.4
2,024,000	+				-0.4
2,024,000	+				+1.9
2,024,008	-				-0.9
2,024,013	-				-0.1
2,024,022	-				+0.9
2,024,252	+		Synpcc7942_1949	0.81	+2.7
2,024,252	+		Synpcc7942_1949	0.81	+2.5
2,024,260	-		Synpcc7942_1949	0.83	-0.7
2,024,268	-		Synpcc7942_1949	0.86	-0.7
2,024,317	+				-0.7
2,024,326	-				+1.2
2,024,334	-				+0.6
2,024,373	-				-0.2
2,024,507	-		Synpcc7942_1950	0.47	-1.1