Strain Fitness in Synechococcus elongatus PCC 7942 around Synpcc7942_1918

Experiment: Biofilm in Fresh BG11R in Flasks with Spin rep 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Biofilm in Fresh BG11R in Flasks with Spin rep 1
1,992,571	+		Synpcc7942_1917	0.18	+0.9
1,992,581	+		Synpcc7942_1917	0.19	+0.9
1,992,587	+		Synpcc7942_1917	0.20	+0.2
1,992,587	+		Synpcc7942_1917	0.20	+2.7
1,992,589	-		Synpcc7942_1917	0.20	-0.9
1,992,589	-		Synpcc7942_1917	0.20	-0.2
1,992,589	-		Synpcc7942_1917	0.20	+1.9
1,992,595	-		Synpcc7942_1917	0.21	-2.0
1,992,596	-		Synpcc7942_1917	0.21	-1.1
1,992,596	-		Synpcc7942_1917	0.21	-0.1
1,992,608	+		Synpcc7942_1917	0.22	+0.3
1,992,616	-		Synpcc7942_1917	0.23	-1.2
1,992,626	-		Synpcc7942_1917	0.23	-0.8
1,992,632	+		Synpcc7942_1917	0.24	-0.4
1,992,643	-		Synpcc7942_1917	0.25	-1.3
1,992,669	+		Synpcc7942_1917	0.27	-3.8
1,992,691	+		Synpcc7942_1917	0.29	+0.9
1,992,698	-		Synpcc7942_1917	0.30	-0.5
1,992,705	-		Synpcc7942_1917	0.31	-0.7
1,992,735	+		Synpcc7942_1917	0.33	-1.2
1,992,743	-		Synpcc7942_1917	0.34	+2.2
1,992,748	-		Synpcc7942_1917	0.35	-0.8
1,992,764	+		Synpcc7942_1917	0.36	-0.9
1,992,789	-		Synpcc7942_1917	0.38	-1.3
1,992,799	+		Synpcc7942_1917	0.39	-1.1
1,992,816	+		Synpcc7942_1917	0.41	-0.3
1,992,816	+		Synpcc7942_1917	0.41	+1.5
1,992,822	-		Synpcc7942_1917	0.41	-2.9
1,992,836	-		Synpcc7942_1917	0.43	-2.8
1,992,841	+		Synpcc7942_1917	0.43	-0.8
1,992,854	-		Synpcc7942_1917	0.44	-1.0
1,992,854	-		Synpcc7942_1917	0.44	+0.3
1,992,875	+		Synpcc7942_1917	0.46	-1.1
1,992,878	-		Synpcc7942_1917	0.46	+1.3
1,992,883	-		Synpcc7942_1917	0.47	-1.6
1,992,907	+		Synpcc7942_1917	0.49	+1.8
1,992,909	+		Synpcc7942_1917	0.49	-3.0
1,992,919	+		Synpcc7942_1917	0.50	-0.1
1,992,922	-		Synpcc7942_1917	0.51	+1.5
1,992,956	-		Synpcc7942_1917	0.54	-1.1
1,992,958	-		Synpcc7942_1917	0.54	+0.4
1,993,016	-		Synpcc7942_1917	0.59	-1.7
1,993,026	-				-1.1
1,993,031	-		Synpcc7942_1917	0.60	-0.6
1,993,033	+		Synpcc7942_1917	0.61	+0.0
1,993,089	+		Synpcc7942_1917	0.66	-2.5
1,993,097	-		Synpcc7942_1917	0.66	-0.8
1,993,097	-		Synpcc7942_1917	0.66	-1.2
1,993,152	+		Synpcc7942_1917	0.72	-0.1
1,993,152	+		Synpcc7942_1917	0.72	-0.7
1,993,152	+		Synpcc7942_1917	0.72	-0.3
1,993,152	+		Synpcc7942_1917	0.72	-0.6
1,993,158	+		Synpcc7942_1917	0.72	-0.3
1,993,160	-		Synpcc7942_1917	0.72	-0.9
1,993,160	-		Synpcc7942_1917	0.72	+1.7
1,993,160	-		Synpcc7942_1917	0.72	-0.9
1,993,160	-		Synpcc7942_1917	0.72	+1.3
1,993,170	+		Synpcc7942_1917	0.73	-0.3
1,993,170	+		Synpcc7942_1917	0.73	-1.5
1,993,170	+		Synpcc7942_1917	0.73	+0.9
1,993,170	-		Synpcc7942_1917	0.73	+0.5
1,993,178	-		Synpcc7942_1917	0.74	-2.2
1,993,178	-		Synpcc7942_1917	0.74	+0.1
1,993,178	-		Synpcc7942_1917	0.74	+2.2
1,993,234	+				-1.0
1,993,239	+		Synpcc7942_1917	0.79	-0.4
1,993,250	-		Synpcc7942_1917	0.80	+1.0
1,993,260	-		Synpcc7942_1917	0.81	+0.9
1,993,297	+		Synpcc7942_1917	0.85	+0.9
1,993,305	-		Synpcc7942_1917	0.85	-1.7
1,993,333	+		Synpcc7942_1917	0.88	-0.8
1,993,333	+		Synpcc7942_1917	0.88	-1.2
1,993,333	+		Synpcc7942_1917	0.88	-0.1
1,993,333	+		Synpcc7942_1917	0.88	+0.2
1,993,333	+		Synpcc7942_1917	0.88	-0.4
1,993,333	+		Synpcc7942_1917	0.88	-0.4
1,993,333	+		Synpcc7942_1917	0.88	+0.6
1,993,333	+		Synpcc7942_1917	0.88	-0.1
1,993,333	+		Synpcc7942_1917	0.88	-3.5
1,993,333	+		Synpcc7942_1917	0.88	-1.9
1,993,333	+		Synpcc7942_1917	0.88	-0.6
1,993,333	+		Synpcc7942_1917	0.88	-0.3
1,993,333	+		Synpcc7942_1917	0.88	+2.0
1,993,333	+		Synpcc7942_1917	0.88	+2.9
1,993,333	+		Synpcc7942_1917	0.88	-2.6
1,993,333	+		Synpcc7942_1917	0.88	-0.1
1,993,333	+		Synpcc7942_1917	0.88	-0.9
1,993,333	+		Synpcc7942_1917	0.88	-4.3
1,993,333	+		Synpcc7942_1917	0.88	-1.4
1,993,333	+		Synpcc7942_1917	0.88	-0.8
1,993,333	+		Synpcc7942_1917	0.88	+2.5
1,993,333	+		Synpcc7942_1917	0.88	+0.3
1,993,333	+		Synpcc7942_1917	0.88	+2.2
1,993,341	-		Synpcc7942_1917	0.89	-1.4
1,993,341	-		Synpcc7942_1917	0.89	+2.5
1,993,341	-		Synpcc7942_1917	0.89	+0.5
1,993,341	-		Synpcc7942_1917	0.89	+0.1
1,993,341	-		Synpcc7942_1917	0.89	+0.3
1,993,341	-		Synpcc7942_1917	0.89	+0.9
1,993,341	-		Synpcc7942_1917	0.89	+1.5
1,993,341	-		Synpcc7942_1917	0.89	+0.5
1,993,341	-		Synpcc7942_1917	0.89	-0.6
1,993,341	-		Synpcc7942_1917	0.89	+0.2
1,993,341	-		Synpcc7942_1917	0.89	-0.2
1,993,341	-		Synpcc7942_1917	0.89	+2.9
1,993,341	-		Synpcc7942_1917	0.89	+2.3
1,993,341	-		Synpcc7942_1917	0.89	+1.8
1,993,341	-		Synpcc7942_1917	0.89	+0.9
1,993,341	-		Synpcc7942_1917	0.89	-0.1
1,993,341	-		Synpcc7942_1917	0.89	-0.3
1,993,341	-		Synpcc7942_1917	0.89	-2.1
1,993,341	-		Synpcc7942_1917	0.89	-1.1
1,993,341	-		Synpcc7942_1917	0.89	-0.1
1,993,348	+				-2.2
1,993,356	-				+1.5
1,993,375	+				+2.3
1,993,411	-				-0.8
1,993,416	-				+0.3
1,993,440	-				-0.7
1,993,450	+				-0.4
1,993,450	+				+0.9
1,993,460	+				-0.0
1,993,513	-				+0.9
1,993,555	-				+1.9
1,993,564	+				+1.3
1,993,572	-				-1.1
1,993,579	-				+1.9
1,993,588	+				+0.9
1,993,588	+				-2.9
1,993,588	+				-1.4
1,993,588	+				+0.9
1,993,594	+				+0.9
1,993,594	+				+0.9
1,993,596	-				+0.9
1,993,596	-				-2.9
1,993,596	-				+2.7
1,993,596	-				-3.4
1,993,596	-				-1.8
1,993,619	+				-0.7
1,993,619	+				+1.3
1,993,620	+				-1.3
1,993,627	-				+0.9
1,993,628	-				-1.4
1,993,644	-	BGluT	Synpcc7942_1918	0.11	-0.7
1,993,646	-	BGluT	Synpcc7942_1918	0.12	-0.1
1,993,700	+	BGluT	Synpcc7942_1918	0.17	-0.7
1,993,700	+	BGluT	Synpcc7942_1918	0.17	+0.9
1,993,708	-	BGluT	Synpcc7942_1918	0.17	-0.4
1,993,722	+	BGluT	Synpcc7942_1918	0.19	-2.2
1,993,722	+	BGluT	Synpcc7942_1918	0.19	+0.9
1,993,770	+				-0.1
1,993,778	-	BGluT	Synpcc7942_1918	0.24	-2.5
1,993,781	+	BGluT	Synpcc7942_1918	0.24	-0.7
1,993,821	-	BGluT	Synpcc7942_1918	0.28	-0.1
1,993,821	-	BGluT	Synpcc7942_1918	0.28	+2.5
1,993,823	+	BGluT	Synpcc7942_1918	0.28	+0.9
1,993,823	+	BGluT	Synpcc7942_1918	0.28	-1.2
1,993,832	-				-0.1
1,993,920	-	BGluT	Synpcc7942_1918	0.37	-0.1
1,993,947	-	BGluT	Synpcc7942_1918	0.39	+0.3
1,993,971	+	BGluT	Synpcc7942_1918	0.42	+0.7
1,993,981	+	BGluT	Synpcc7942_1918	0.43	-0.1
1,993,981	+	BGluT	Synpcc7942_1918	0.43	+0.9
1,993,981	+	BGluT	Synpcc7942_1918	0.43	-0.1
1,993,982	-	BGluT	Synpcc7942_1918	0.43	+0.3
1,993,989	-	BGluT	Synpcc7942_1918	0.43	-0.7
1,993,989	-	BGluT	Synpcc7942_1918	0.43	+0.9
1,993,993	-	BGluT	Synpcc7942_1918	0.44	+0.9
1,993,993	-	BGluT	Synpcc7942_1918	0.44	-0.5
1,993,998	+	BGluT	Synpcc7942_1918	0.44	+0.9
1,994,006	-	BGluT	Synpcc7942_1918	0.45	-0.7
1,994,006	-	BGluT	Synpcc7942_1918	0.45	-1.4
1,994,037	+	BGluT	Synpcc7942_1918	0.48	-1.7
1,994,037	+	BGluT	Synpcc7942_1918	0.48	-0.1
1,994,037	+	BGluT	Synpcc7942_1918	0.48	+0.9
1,994,038	+	BGluT	Synpcc7942_1918	0.48	-2.9
1,994,052	+	BGluT	Synpcc7942_1918	0.49	+0.9
1,994,052	+	BGluT	Synpcc7942_1918	0.49	+0.9
1,994,060	-	BGluT	Synpcc7942_1918	0.50	-1.4
1,994,060	-	BGluT	Synpcc7942_1918	0.50	-0.7
1,994,068	-	BGluT	Synpcc7942_1918	0.51	-3.1
1,994,071	+	BGluT	Synpcc7942_1918	0.51	-0.1
1,994,079	-	BGluT	Synpcc7942_1918	0.52	+1.5
1,994,082	+	BGluT	Synpcc7942_1918	0.52	+0.3
1,994,082	+	BGluT	Synpcc7942_1918	0.52	-0.7
1,994,092	+	BGluT	Synpcc7942_1918	0.53	-2.5
1,994,092	+	BGluT	Synpcc7942_1918	0.53	-0.1
1,994,095	-	BGluT	Synpcc7942_1918	0.53	-0.7
1,994,101	+	BGluT	Synpcc7942_1918	0.54	+0.3
1,994,118	+	BGluT	Synpcc7942_1918	0.55	+1.5
1,994,119	+	BGluT	Synpcc7942_1918	0.55	-0.4
1,994,168	+	BGluT	Synpcc7942_1918	0.60	+0.0
1,994,168	+	BGluT	Synpcc7942_1918	0.60	-2.2
1,994,173	+	BGluT	Synpcc7942_1918	0.60	-2.7
1,994,173	+	BGluT	Synpcc7942_1918	0.60	+0.9
1,994,176	-	BGluT	Synpcc7942_1918	0.61	+0.9
1,994,176	-	BGluT	Synpcc7942_1918	0.61	-0.1
1,994,176	-	BGluT	Synpcc7942_1918	0.61	-1.2
1,994,176	-	BGluT	Synpcc7942_1918	0.61	+0.9
1,994,176	-	BGluT	Synpcc7942_1918	0.61	+0.3
1,994,176	-	BGluT	Synpcc7942_1918	0.61	-1.4
1,994,178	+	BGluT	Synpcc7942_1918	0.61	-2.2
1,994,183	+	BGluT	Synpcc7942_1918	0.61	-0.9
1,994,246	+	BGluT	Synpcc7942_1918	0.67	+0.9
1,994,255	-				-2.1
1,994,281	-	BGluT	Synpcc7942_1918	0.70	-2.8
1,994,290	+	BGluT	Synpcc7942_1918	0.71	-0.5
1,994,295	+	BGluT	Synpcc7942_1918	0.72	+1.5
1,994,298	-	BGluT	Synpcc7942_1918	0.72	+0.9
1,994,303	-	BGluT	Synpcc7942_1918	0.72	+2.5
1,994,306	-	BGluT	Synpcc7942_1918	0.73	-0.5
1,994,325	+	BGluT	Synpcc7942_1918	0.74	+0.1
1,994,344	+	BGluT	Synpcc7942_1918	0.76	+0.3
1,994,351	-	BGluT	Synpcc7942_1918	0.77	-1.5
1,994,354	+	BGluT	Synpcc7942_1918	0.77	-0.1
1,994,370	+	BGluT	Synpcc7942_1918	0.79	-0.3
1,994,370	+	BGluT	Synpcc7942_1918	0.79	-0.5
1,994,376	+	BGluT	Synpcc7942_1918	0.79	-0.7
1,994,378	-	BGluT	Synpcc7942_1918	0.79	-2.3
1,994,378	-	BGluT	Synpcc7942_1918	0.79	+1.9
1,994,378	-	BGluT	Synpcc7942_1918	0.79	-0.1
1,994,384	-	BGluT	Synpcc7942_1918	0.80	-2.9
1,994,384	-	BGluT	Synpcc7942_1918	0.80	-1.8
1,994,422	-	BGluT	Synpcc7942_1918	0.83	-2.0
1,994,422	-	BGluT	Synpcc7942_1918	0.83	+0.9
1,994,428	+	BGluT	Synpcc7942_1918	0.84	-1.1
1,994,440	-	BGluT	Synpcc7942_1918	0.85	+0.9
1,994,444	+	BGluT	Synpcc7942_1918	0.85	-2.1
1,994,454	+	BGluT	Synpcc7942_1918	0.86	-1.7
1,994,459	+	BGluT	Synpcc7942_1918	0.87	+0.9
1,994,480	+				+1.9
1,994,484	+	BGluT	Synpcc7942_1918	0.89	+2.2
1,994,488	-	BGluT	Synpcc7942_1918	0.90	-1.6
1,994,488	-	BGluT	Synpcc7942_1918	0.90	-1.7
1,994,551	+				-2.0
1,994,552	-				+0.9
1,994,570	-				+2.9
1,994,574	+				-1.2
1,994,582	-				+0.2
1,994,582	-				-3.0
1,994,645	-		Synpcc7942_1919	0.10	-3.6
1,994,655	-		Synpcc7942_1919	0.12	+0.6
1,994,683	+		Synpcc7942_1919	0.15	+0.1
1,994,762	-		Synpcc7942_1919	0.26	-0.7
1,994,774	+		Synpcc7942_1919	0.27	-1.5
1,994,779	+		Synpcc7942_1919	0.28	-1.2
1,994,784	+		Synpcc7942_1919	0.29	-1.6
1,994,787	-		Synpcc7942_1919	0.29	-1.1
1,994,787	-		Synpcc7942_1919	0.29	+1.3
1,994,816	-		Synpcc7942_1919	0.33	-0.8
1,994,825	-		Synpcc7942_1919	0.34	-1.4
1,994,826	-		Synpcc7942_1919	0.34	+0.9
1,994,826	-		Synpcc7942_1919	0.34	-3.1
1,994,881	-		Synpcc7942_1919	0.41	-0.7
1,994,909	-		Synpcc7942_1919	0.45	-1.2
1,994,911	-		Synpcc7942_1919	0.45	-4.4
1,994,919	-		Synpcc7942_1919	0.46	-0.5
1,994,922	+		Synpcc7942_1919	0.47	-1.3
1,994,928	-		Synpcc7942_1919	0.48	+1.9
1,994,951	-		Synpcc7942_1919	0.51	-2.7
1,994,957	+		Synpcc7942_1919	0.51	-1.2
1,994,961	-		Synpcc7942_1919	0.52	+0.9
1,994,962	+		Synpcc7942_1919	0.52	-1.8
1,994,970	-		Synpcc7942_1919	0.53	-2.0
1,994,970	-		Synpcc7942_1919	0.53	-0.7
1,994,979	+		Synpcc7942_1919	0.54	-1.3
1,994,979	+				-3.2
1,994,979	+		Synpcc7942_1919	0.54	+0.7
1,994,979	-		Synpcc7942_1919	0.54	-0.8
1,994,987	-		Synpcc7942_1919	0.55	-0.1
1,995,001	+		Synpcc7942_1919	0.57	-0.7
1,995,011	+		Synpcc7942_1919	0.59	-1.1
1,995,030	+		Synpcc7942_1919	0.61	+0.2
1,995,033	-		Synpcc7942_1919	0.61	-0.7
1,995,035	+		Synpcc7942_1919	0.62	+2.3
1,995,035	+		Synpcc7942_1919	0.62	-3.2
1,995,058	-		Synpcc7942_1919	0.65	+0.9
1,995,058	-		Synpcc7942_1919	0.65	-1.6
1,995,058	-		Synpcc7942_1919	0.65	-0.8
1,995,074	+		Synpcc7942_1919	0.67	-0.8
1,995,082	-		Synpcc7942_1919	0.68	+0.8
1,995,146	+		Synpcc7942_1919	0.76	+0.9
1,995,154	-		Synpcc7942_1919	0.77	-0.4
1,995,154	-		Synpcc7942_1919	0.77	-0.6
1,995,183	-		Synpcc7942_1919	0.81	-1.5
1,995,192	+		Synpcc7942_1919	0.82	-1.1
1,995,258	-				+1.9
1,995,489	-				+0.9
1,995,489	-				-0.6
1,995,491	+				-0.1
1,995,536	-				-1.0
1,995,552	+				-0.9
1,995,591	-				+2.9