Strain Fitness in Synechococcus elongatus PCC 7942 around Synpcc7942_1763

Experiment: Biofilm in Fresh BG11R in Flasks with Spin rep 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Biofilm in Fresh BG11R in Flasks with Spin rep 1
1,830,053	+		Synpcc7942_1762	0.33	+0.9
1,830,055	-		Synpcc7942_1762	0.33	-1.4
1,830,058	+		Synpcc7942_1762	0.33	-3.4
1,830,091	+		Synpcc7942_1762	0.35	+0.9
1,830,098	-		Synpcc7942_1762	0.36	+1.5
1,830,099	-		Synpcc7942_1762	0.36	+0.3
1,830,099	-		Synpcc7942_1762	0.36	-1.2
1,830,172	+		Synpcc7942_1762	0.41	-0.1
1,830,182	+		Synpcc7942_1762	0.42	-0.1
1,830,189	+		Synpcc7942_1762	0.42	-1.1
1,830,196	+		Synpcc7942_1762	0.43	+1.3
1,830,196	+		Synpcc7942_1762	0.43	-1.7
1,830,222	+		Synpcc7942_1762	0.44	+1.9
1,830,228	+		Synpcc7942_1762	0.45	-0.8
1,830,254	-		Synpcc7942_1762	0.47	+0.9
1,830,265	+		Synpcc7942_1762	0.47	+0.3
1,830,265	+		Synpcc7942_1762	0.47	-0.6
1,830,275	+		Synpcc7942_1762	0.48	+0.9
1,830,278	-		Synpcc7942_1762	0.48	-0.9
1,830,328	-		Synpcc7942_1762	0.52	-3.7
1,830,350	-		Synpcc7942_1762	0.53	+1.2
1,830,399	+		Synpcc7942_1762	0.57	-1.1
1,830,399	+		Synpcc7942_1762	0.57	-1.4
1,830,399	+		Synpcc7942_1762	0.57	-0.7
1,830,406	+		Synpcc7942_1762	0.57	-2.6
1,830,407	-		Synpcc7942_1762	0.57	+1.3
1,830,416	+		Synpcc7942_1762	0.58	+0.9
1,830,416	+		Synpcc7942_1762	0.58	-0.7
1,830,424	-		Synpcc7942_1762	0.58	+1.5
1,830,433	-		Synpcc7942_1762	0.59	+0.9
1,830,458	-		Synpcc7942_1762	0.61	-3.0
1,830,488	+		Synpcc7942_1762	0.63	+0.7
1,830,488	+		Synpcc7942_1762	0.63	-2.6
1,830,496	-		Synpcc7942_1762	0.63	+0.9
1,830,496	-		Synpcc7942_1762	0.63	-2.3
1,830,576	+		Synpcc7942_1762	0.69	-0.7
1,830,586	+		Synpcc7942_1762	0.69	-0.1
1,830,586	+		Synpcc7942_1762	0.69	+1.2
1,830,586	+		Synpcc7942_1762	0.69	+0.3
1,830,615	-		Synpcc7942_1762	0.71	+0.7
1,830,682	-		Synpcc7942_1762	0.76	+0.3
1,830,686	-		Synpcc7942_1762	0.76	-0.4
1,830,766	+		Synpcc7942_1762	0.82	-1.1
1,830,788	+		Synpcc7942_1762	0.83	-3.2
1,830,866	-		Synpcc7942_1762	0.89	-0.9
1,830,899	-				-1.0
1,830,899	-				+2.5
1,830,902	+				-1.9
1,830,905	-				-0.9
1,830,905	-				+3.2
1,830,905	-				-1.1
1,830,912	+				-2.0
1,830,931	-				-0.1
1,830,960	-				-1.4
1,830,963	+				-5.0
1,830,963	+				-0.5
1,831,077	+				+1.7
1,831,077	+				+0.9
1,831,085	-				-1.5
1,831,118	+		Synpcc7942_1763	0.11	+1.5
1,831,176	+		Synpcc7942_1763	0.18	-3.0
1,831,176	+		Synpcc7942_1763	0.18	-0.3
1,831,176	+		Synpcc7942_1763	0.18	+1.5
1,831,176	+		Synpcc7942_1763	0.18	-0.1
1,831,176	+		Synpcc7942_1763	0.18	-0.8
1,831,183	-		Synpcc7942_1763	0.19	-0.1
1,831,184	-		Synpcc7942_1763	0.19	+2.9
1,831,184	-		Synpcc7942_1763	0.19	+1.4
1,831,198	+		Synpcc7942_1763	0.21	+0.9
1,831,262	+		Synpcc7942_1763	0.29	+2.5
1,831,307	+		Synpcc7942_1763	0.34	-3.8
1,831,315	-		Synpcc7942_1763	0.35	-1.0
1,831,354	+		Synpcc7942_1763	0.40	-4.1
1,831,414	+		Synpcc7942_1763	0.47	+0.9
1,831,444	+		Synpcc7942_1763	0.51	+1.6
1,831,452	-		Synpcc7942_1763	0.52	-0.8
1,831,452	-		Synpcc7942_1763	0.52	+0.2
1,831,452	-		Synpcc7942_1763	0.52	-1.3
1,831,452	-		Synpcc7942_1763	0.52	-1.7
1,831,470	+		Synpcc7942_1763	0.54	+1.5
1,831,493	-		Synpcc7942_1763	0.57	+0.1
1,831,498	-		Synpcc7942_1763	0.57	+2.5
1,831,510	+		Synpcc7942_1763	0.59	-3.4
1,831,510	+		Synpcc7942_1763	0.59	-0.4
1,831,541	+		Synpcc7942_1763	0.63	-0.1
1,831,567	-		Synpcc7942_1763	0.66	+0.3
1,831,583	+		Synpcc7942_1763	0.68	+0.1
1,831,618	+		Synpcc7942_1763	0.72	-0.6
1,831,621	-		Synpcc7942_1763	0.72	-1.2
1,831,621	-		Synpcc7942_1763	0.72	-1.8
1,831,621	-		Synpcc7942_1763	0.72	-3.1
1,831,630	+		Synpcc7942_1763	0.74	+0.9
1,831,638	-		Synpcc7942_1763	0.74	+1.2
1,831,658	-		Synpcc7942_1763	0.77	+0.1
1,831,687	+		Synpcc7942_1763	0.80	+0.6
1,831,705	+		Synpcc7942_1763	0.83	-1.4
1,831,794	+				-0.6
1,831,819	+				-2.2
1,831,819	+				+1.5
1,831,819	-				-0.6
1,831,832	+				+2.1
1,831,832	+				-0.7
1,831,843	+				-0.9
1,831,849	-				+2.9
1,831,916	-		Synpcc7942_1764	0.15	+0.9
1,831,921	-		Synpcc7942_1764	0.16	-1.6
1,831,964	-		Synpcc7942_1764	0.28	-0.6
1,831,978	+		Synpcc7942_1764	0.31	-0.5
1,831,978	+		Synpcc7942_1764	0.31	+0.9
1,831,986	-		Synpcc7942_1764	0.34	+1.1
1,831,986	-		Synpcc7942_1764	0.34	+0.9
1,832,005	+		Synpcc7942_1764	0.39	-1.4
1,832,010	+		Synpcc7942_1764	0.40	+1.6
1,832,010	+		Synpcc7942_1764	0.40	+2.1
1,832,010	+		Synpcc7942_1764	0.40	+0.0
1,832,011	+		Synpcc7942_1764	0.40	+0.6
1,832,051	+		Synpcc7942_1764	0.51	-1.4
1,832,051	-		Synpcc7942_1764	0.51	-2.2
1,832,052	-		Synpcc7942_1764	0.51	+0.2
1,832,059	-		Synpcc7942_1764	0.53	-1.0
1,832,066	+		Synpcc7942_1764	0.55	+1.1
1,832,066	+		Synpcc7942_1764	0.55	-1.3
1,832,074	-		Synpcc7942_1764	0.57	+1.5
1,832,074	-				-2.9
1,832,074	-		Synpcc7942_1764	0.57	-0.9
1,832,074	-		Synpcc7942_1764	0.57	+2.1
1,832,074	-		Synpcc7942_1764	0.57	-0.1
1,832,089	+		Synpcc7942_1764	0.62	-2.2
1,832,106	+		Synpcc7942_1764	0.66	-0.9
1,832,106	+		Synpcc7942_1764	0.66	-0.7
1,832,205	-				-1.5
1,832,232	-				-0.4
1,832,242	+				+1.8
1,832,250	-				-0.4
1,832,262	-				-0.2
1,832,291	+				+0.8
1,832,303	-				+0.4
1,832,359	+		Synpcc7942_1765	0.11	-0.7
1,832,367	-		Synpcc7942_1765	0.13	-1.5
1,832,367	-		Synpcc7942_1765	0.13	-0.7
1,832,398	-		Synpcc7942_1765	0.19	-0.5
1,832,419	+		Synpcc7942_1765	0.23	+1.5
1,832,439	+		Synpcc7942_1765	0.27	-1.7
1,832,489	+		Synpcc7942_1765	0.37	-1.7
1,832,489	+		Synpcc7942_1765	0.37	-0.2
1,832,497	-		Synpcc7942_1765	0.38	-2.7
1,832,589	-		Synpcc7942_1765	0.57	-0.7
1,832,662	-		Synpcc7942_1765	0.71	-0.4
1,832,675	-		Synpcc7942_1765	0.74	-0.5
1,832,710	-		Synpcc7942_1765	0.81	+0.9
1,832,713	-		Synpcc7942_1765	0.81	+2.3
1,832,764	+				+0.9
1,832,768	+				-0.9
1,832,792	+				+0.7
1,832,811	+				+1.2
1,832,815	+				-0.1
1,832,825	-				+1.9
1,832,835	+				-0.4
1,832,843	-				-0.3