Strain Fitness in Synechococcus elongatus PCC 7942 around Synpcc7942_1632

Experiment: Biofilm in Fresh BG11R in Flasks with Spin rep 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Biofilm in Fresh BG11R in Flasks with Spin rep 1
1,699,291	+				+3.8
1,699,324	+				-2.3
1,699,370	+				-0.6
1,699,370	+	cytB	Synpcc7942_1631	0.11	-0.9
1,699,370	+	cytB	Synpcc7942_1631	0.11	+0.9
1,699,378	-	cytB	Synpcc7942_1631	0.12	+0.9
1,699,382	+	cytB	Synpcc7942_1631	0.13	-1.9
1,699,382	+				-2.1
1,699,383	-	cytB	Synpcc7942_1631	0.13	-0.6
1,699,383	-	cytB	Synpcc7942_1631	0.13	-1.9
1,699,383	-	cytB	Synpcc7942_1631	0.13	-0.1
1,699,388	-	cytB	Synpcc7942_1631	0.13	-0.2
1,699,398	+	cytB	Synpcc7942_1631	0.14	+0.9
1,699,427	+	cytB	Synpcc7942_1631	0.18	+1.5
1,699,470	-	cytB	Synpcc7942_1631	0.22	-1.8
1,699,472	+	cytB	Synpcc7942_1631	0.23	-2.0
1,699,477	+	cytB	Synpcc7942_1631	0.23	-0.1
1,699,480	-	cytB	Synpcc7942_1631	0.23	-0.5
1,699,485	-	cytB	Synpcc7942_1631	0.24	-0.6
1,699,541	+	cytB	Synpcc7942_1631	0.30	+0.5
1,699,577	-	cytB	Synpcc7942_1631	0.34	-0.1
1,699,631	+	cytB	Synpcc7942_1631	0.40	-0.8
1,699,631	-	cytB	Synpcc7942_1631	0.40	+0.8
1,699,631	-	cytB	Synpcc7942_1631	0.40	-1.1
1,699,643	+	cytB	Synpcc7942_1631	0.42	-1.4
1,699,645	+	cytB	Synpcc7942_1631	0.42	-2.3
1,699,651	-	cytB	Synpcc7942_1631	0.42	-2.9
1,699,670	+	cytB	Synpcc7942_1631	0.45	+0.0
1,699,675	+	cytB	Synpcc7942_1631	0.45	-1.8
1,699,683	-	cytB	Synpcc7942_1631	0.46	-1.4
1,699,683	-	cytB	Synpcc7942_1631	0.46	-0.7
1,699,693	-	cytB	Synpcc7942_1631	0.47	+2.2
1,699,781	+	cytB	Synpcc7942_1631	0.57	-0.4
1,699,781	+	cytB	Synpcc7942_1631	0.57	-1.6
1,699,781	+	cytB	Synpcc7942_1631	0.57	-0.3
1,699,791	+	cytB	Synpcc7942_1631	0.58	+2.5
1,699,791	+	cytB	Synpcc7942_1631	0.58	+1.3
1,699,799	-	cytB	Synpcc7942_1631	0.59	-0.4
1,699,799	-	cytB	Synpcc7942_1631	0.59	-2.9
1,699,806	+	cytB	Synpcc7942_1631	0.60	-1.3
1,699,813	+	cytB	Synpcc7942_1631	0.60	+1.8
1,699,821	+	cytB	Synpcc7942_1631	0.61	+0.1
1,699,848	+	cytB	Synpcc7942_1631	0.64	-1.3
1,699,853	+	cytB	Synpcc7942_1631	0.65	+0.9
1,699,856	-	cytB	Synpcc7942_1631	0.65	+0.9
1,699,856	-	cytB	Synpcc7942_1631	0.65	-3.3
1,699,883	+	cytB	Synpcc7942_1631	0.68	-0.8
1,699,891	-	cytB	Synpcc7942_1631	0.69	+0.9
1,699,951	+	cytB	Synpcc7942_1631	0.76	-0.9
1,699,973	+	cytB	Synpcc7942_1631	0.78	-1.1
1,700,001	+	cytB	Synpcc7942_1631	0.81	-2.1
1,700,009	-	cytB	Synpcc7942_1631	0.82	+0.9
1,700,009	-	cytB	Synpcc7942_1631	0.82	-0.4
1,700,021	+	cytB	Synpcc7942_1631	0.84	-1.7
1,700,029	-	cytB	Synpcc7942_1631	0.84	+0.9
1,700,065	+	cytB	Synpcc7942_1631	0.88	+2.5
1,700,073	+	cytB	Synpcc7942_1631	0.89	-0.1
1,700,104	-				-1.4
1,700,126	-				+2.2
1,700,178	+				-1.2
1,700,237	+				+0.5
1,700,277	+				-2.1
1,700,283	-				+0.9
1,700,332	+		Synpcc7942_1632	0.14	+2.1
1,700,388	+		Synpcc7942_1632	0.25	-1.1
1,700,417	-		Synpcc7942_1632	0.30	-2.6
1,700,422	-		Synpcc7942_1632	0.31	+0.9
1,700,422	-		Synpcc7942_1632	0.31	-1.8
1,700,454	-		Synpcc7942_1632	0.37	-1.2
1,700,632	+		Synpcc7942_1632	0.72	+1.4
1,700,640	-		Synpcc7942_1632	0.74	-3.7
1,700,747	+				+0.6
1,700,755	-				-1.4
1,700,884	+				+0.4
1,700,884	+				+3.5
1,701,176	-				-1.4
1,701,330	+				-1.5
1,701,360	-				+0.9
1,701,365	+				+2.4
1,701,391	+				+1.9
1,701,404	-				-1.3
1,701,454	-		Synpcc7942_1633	0.12	-0.1
1,701,517	+		Synpcc7942_1633	0.20	+2.2
1,701,555	-		Synpcc7942_1633	0.26	-0.6
1,701,591	-		Synpcc7942_1633	0.31	-0.7
1,701,651	-		Synpcc7942_1633	0.39	+1.7
1,701,670	-		Synpcc7942_1633	0.42	+1.5
1,701,726	-		Synpcc7942_1633	0.49	-0.1