Strain Fitness in Synechococcus elongatus PCC 7942 around Synpcc7942_1581

Experiment: Biofilm in Fresh BG11R in Flasks with Spin rep 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Biofilm in Fresh BG11R in Flasks with Spin rep 1
1,644,148	+		Synpcc7942_1580	0.32	-2.4
1,644,166	-		Synpcc7942_1580	0.36	-0.5
1,644,176	+		Synpcc7942_1580	0.39	-0.6
1,644,182	+		Synpcc7942_1580	0.40	-1.8
1,644,205	-		Synpcc7942_1580	0.46	+1.0
1,644,207	+		Synpcc7942_1580	0.46	-0.3
1,644,216	+		Synpcc7942_1580	0.48	+2.3
1,644,246	+		Synpcc7942_1580	0.55	+0.6
1,644,247	+		Synpcc7942_1580	0.55	-0.3
1,644,332	+		Synpcc7942_1580	0.75	-2.1
1,644,332	+		Synpcc7942_1580	0.75	+0.7
1,644,332	+		Synpcc7942_1580	0.75	+1.0
1,644,340	-		Synpcc7942_1580	0.77	-1.3
1,644,340	-		Synpcc7942_1580	0.77	+1.4
1,644,340	-		Synpcc7942_1580	0.77	+1.0
1,644,385	+		Synpcc7942_1580	0.88	-2.9
1,644,416	-				+0.4
1,644,450	+				-1.3
1,644,483	+				+1.0
1,644,537	+				-1.6
1,644,545	-				-0.3
1,644,550	-				+0.3
1,644,551	+				-3.8
1,644,551	+				-0.6
1,644,559	-				-3.2
1,644,587	-				-1.5
1,644,616	+				+2.3
1,644,616	+				-0.0
1,644,616	+				-0.8
1,644,616	+				-1.3
1,644,616	+				-1.2
1,644,616	+				-0.6
1,644,616	+				+2.0
1,644,616	+				+1.2
1,644,624	-				-0.6
1,644,624	-				+0.4
1,644,624	-				-0.2
1,644,624	-				+1.0
1,644,624	-				-1.7
1,644,624	-				-4.0
1,644,624	-				-2.0
1,644,624	-				+1.0
1,644,624	-				-0.0
1,644,624	-				+2.0
1,644,624	-				-0.0
1,644,624	-				-0.0
1,644,625	-				-1.5
1,644,790	-				-1.0
1,644,802	+				-0.8
1,644,807	+				-0.5
1,644,810	+				+1.0
1,644,819	+				-3.0
1,644,827	-				-1.8
1,644,873	+				+1.0
1,644,931	+				-1.6
1,644,968	+				-1.6
1,645,024	-				-2.7
1,645,074	+				-0.9
1,645,122	+				-1.4
1,645,130	-				-1.1
1,645,130	-				+1.0
1,645,132	+				-1.8
1,645,140	-				-1.6
1,645,240	+				+1.0
1,645,247	+				-2.3
1,645,247	+				-1.8
1,645,262	-				-0.7
1,645,302	-				-1.4
1,645,302	-				-0.6
1,645,302	-				-0.0
1,645,320	+		Synpcc7942_1581	0.11	+1.3
1,645,323	-		Synpcc7942_1581	0.11	+1.0
1,645,325	+		Synpcc7942_1581	0.11	-1.6
1,645,328	+		Synpcc7942_1581	0.11	-2.0
1,645,420	+		Synpcc7942_1581	0.17	-0.0
1,645,428	-		Synpcc7942_1581	0.17	-1.0
1,645,443	+		Synpcc7942_1581	0.18	-1.4
1,645,451	-		Synpcc7942_1581	0.18	-0.0
1,645,451	-		Synpcc7942_1581	0.18	-1.8
1,645,453	-		Synpcc7942_1581	0.19	-1.7
1,645,472	-		Synpcc7942_1581	0.20	-1.4
1,645,489	-		Synpcc7942_1581	0.21	-3.2
1,645,496	+		Synpcc7942_1581	0.21	-1.7
1,645,502	+		Synpcc7942_1581	0.21	-0.3
1,645,516	+		Synpcc7942_1581	0.22	-1.0
1,645,524	-		Synpcc7942_1581	0.23	+0.5
1,645,538	+		Synpcc7942_1581	0.24	+1.0
1,645,543	+		Synpcc7942_1581	0.24	-1.6
1,645,543	+		Synpcc7942_1581	0.24	-3.0
1,645,544	-		Synpcc7942_1581	0.24	+1.6
1,645,551	-		Synpcc7942_1581	0.24	-1.6
1,645,551	-				-2.3
1,645,551	-		Synpcc7942_1581	0.24	-2.5
1,645,551	-		Synpcc7942_1581	0.24	-1.3
1,645,553	-		Synpcc7942_1581	0.24	-1.6
1,645,558	-		Synpcc7942_1581	0.25	-1.3
1,645,582	-				-1.6
1,645,636	+		Synpcc7942_1581	0.29	+0.1
1,645,641	+		Synpcc7942_1581	0.30	-1.3
1,645,665	+		Synpcc7942_1581	0.31	-1.9
1,645,697	-		Synpcc7942_1581	0.33	-1.0
1,645,701	-		Synpcc7942_1581	0.33	-1.9
1,645,711	+		Synpcc7942_1581	0.34	-0.3
1,645,711	+		Synpcc7942_1581	0.34	-1.9
1,645,711	+		Synpcc7942_1581	0.34	-0.7
1,645,719	-		Synpcc7942_1581	0.34	-0.9
1,645,719	-		Synpcc7942_1581	0.34	-0.3
1,645,725	+		Synpcc7942_1581	0.35	+2.6
1,645,829	+		Synpcc7942_1581	0.41	-3.2
1,645,843	-		Synpcc7942_1581	0.42	-1.3
1,645,950	+		Synpcc7942_1581	0.48	-1.8
1,645,952	+		Synpcc7942_1581	0.48	-0.9
1,645,958	-		Synpcc7942_1581	0.49	-1.9
1,645,963	+		Synpcc7942_1581	0.49	-2.5
1,645,971	-		Synpcc7942_1581	0.49	+0.4
1,645,998	+		Synpcc7942_1581	0.51	-1.8
1,646,129	+		Synpcc7942_1581	0.59	-0.0
1,646,146	-		Synpcc7942_1581	0.60	+0.6
1,646,160	-		Synpcc7942_1581	0.61	-1.3
1,646,299	-		Synpcc7942_1581	0.69	+1.0
1,646,497	+		Synpcc7942_1581	0.81	-0.0
1,646,553	+		Synpcc7942_1581	0.84	-0.1
1,646,560	-		Synpcc7942_1581	0.84	-0.3
1,646,616	+		Synpcc7942_1581	0.88	+0.2
1,646,622	-		Synpcc7942_1581	0.88	+2.5
1,646,624	-		Synpcc7942_1581	0.88	-0.5
1,646,649	+		Synpcc7942_1581	0.90	+1.0
1,646,649	+		Synpcc7942_1581	0.90	+1.0
1,646,656	-				-0.0
1,646,657	-				-0.2
1,646,716	+				-1.3
1,646,789	+				-1.6
1,646,789	+				-1.1