Strain Fitness in Synechococcus elongatus PCC 7942 around Synpcc7942_1336

Experiment: Biofilm in Fresh BG11R in Flasks with Spin rep 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Biofilm in Fresh BG11R in Flasks with Spin rep 1
1,366,334	+		Synpcc7942_1335	0.20	+1.0
1,366,399	+		Synpcc7942_1335	0.28	+1.0
1,366,446	-		Synpcc7942_1335	0.34	-1.0
1,366,446	-		Synpcc7942_1335	0.34	+1.0
1,366,446	-		Synpcc7942_1335	0.34	-1.2
1,366,446	-		Synpcc7942_1335	0.34	+0.0
1,366,466	+		Synpcc7942_1335	0.36	+0.0
1,366,613	+		Synpcc7942_1335	0.55	+1.0
1,366,613	+		Synpcc7942_1335	0.55	-0.3
1,366,640	+		Synpcc7942_1335	0.58	+1.0
1,366,671	+		Synpcc7942_1335	0.62	+1.0
1,366,753	+		Synpcc7942_1335	0.72	+1.0
1,366,766	-		Synpcc7942_1335	0.74	+2.0
1,366,773	+		Synpcc7942_1335	0.75	+1.0
1,366,917	+				+0.3
1,366,917	+				+1.0
1,366,935	-				+0.7
1,366,968	-				+1.0
1,367,019	+				-0.5
1,367,020	+				-0.8
1,367,027	-				-2.7
1,367,068	+				+0.2
1,367,086	-				+1.6
1,367,122	-				-1.4
1,367,207	+				-1.0
1,367,215	-				-0.2
1,367,225	-				-0.9
1,367,225	-				-2.3
1,367,226	+				+3.6
1,367,253	+				-0.6
1,367,296	-				-0.7
1,367,306	-				-1.6
1,367,306	-				-1.2
1,367,323	+				+1.0
1,367,354	+				+0.4
1,367,362	+				-0.4
1,367,439	+		Synpcc7942_1336	0.16	-2.4
1,367,458	+		Synpcc7942_1336	0.18	-0.7
1,367,493	-		Synpcc7942_1336	0.21	-0.6
1,367,504	+		Synpcc7942_1336	0.22	-0.6
1,367,522	+		Synpcc7942_1336	0.24	-2.3
1,367,529	+		Synpcc7942_1336	0.25	-2.0
1,367,529	+		Synpcc7942_1336	0.25	-1.0
1,367,529	+		Synpcc7942_1336	0.25	-3.7
1,367,529	+		Synpcc7942_1336	0.25	-1.6
1,367,529	+		Synpcc7942_1336	0.25	-0.2
1,367,537	-		Synpcc7942_1336	0.25	-1.4
1,367,537	-		Synpcc7942_1336	0.25	-2.2
1,367,537	-		Synpcc7942_1336	0.25	-0.6
1,367,537	-		Synpcc7942_1336	0.25	-2.4
1,367,537	-		Synpcc7942_1336	0.25	+0.8
1,367,537	-		Synpcc7942_1336	0.25	+0.4
1,367,563	+		Synpcc7942_1336	0.28	-0.2
1,367,566	-		Synpcc7942_1336	0.28	+1.0
1,367,595	+		Synpcc7942_1336	0.31	-0.6
1,367,602	-		Synpcc7942_1336	0.31	-0.8
1,367,602	-		Synpcc7942_1336	0.31	-1.3
1,367,603	-		Synpcc7942_1336	0.32	-3.7
1,367,643	+		Synpcc7942_1336	0.35	-0.1
1,367,643	+		Synpcc7942_1336	0.35	-1.6
1,367,643	+		Synpcc7942_1336	0.35	-0.9
1,367,651	-		Synpcc7942_1336	0.36	+0.0
1,367,651	-		Synpcc7942_1336	0.36	-0.6
1,367,651	-		Synpcc7942_1336	0.36	-1.7
1,367,651	-		Synpcc7942_1336	0.36	+1.0
1,367,651	-		Synpcc7942_1336	0.36	-3.6
1,367,651	-		Synpcc7942_1336	0.36	-0.6
1,367,653	+		Synpcc7942_1336	0.36	+0.0
1,367,674	+		Synpcc7942_1336	0.38	-2.1
1,367,674	+		Synpcc7942_1336	0.38	-2.3
1,367,680	-		Synpcc7942_1336	0.39	-1.9
1,367,682	-		Synpcc7942_1336	0.39	-1.5
1,367,687	+		Synpcc7942_1336	0.39	-2.0
1,367,696	+		Synpcc7942_1336	0.40	-2.2
1,367,709	+		Synpcc7942_1336	0.41	+0.4
1,367,717	-		Synpcc7942_1336	0.42	-3.1
1,367,768	+		Synpcc7942_1336	0.47	+0.1
1,367,864	+		Synpcc7942_1336	0.56	-1.2
1,367,869	+		Synpcc7942_1336	0.56	-1.3
1,367,869	+		Synpcc7942_1336	0.56	-1.4
1,367,877	-		Synpcc7942_1336	0.57	-1.6
1,367,917	+		Synpcc7942_1336	0.61	-1.4
1,367,940	+		Synpcc7942_1336	0.63	+1.0
1,368,007	+		Synpcc7942_1336	0.69	+0.0
1,368,027	+		Synpcc7942_1336	0.71	-1.3
1,368,033	-		Synpcc7942_1336	0.71	+2.0
1,368,091	-		Synpcc7942_1336	0.77	+1.0
1,368,106	-		Synpcc7942_1336	0.78	+1.7
1,368,140	-		Synpcc7942_1336	0.81	+1.0
1,368,144	+		Synpcc7942_1336	0.82	+2.0
1,368,152	-		Synpcc7942_1336	0.82	-3.1
1,368,185	+				-0.2
1,368,193	-		Synpcc7942_1336	0.86	-0.7
1,368,206	+		Synpcc7942_1336	0.87	-0.6
1,368,241	+				-1.2
1,368,249	+				+1.0
1,368,249	-				-0.6
1,368,249	-				+1.0
1,368,264	-				-1.7
1,368,292	+				+0.9
1,368,345	-				+0.4
1,368,360	+				+0.7
1,368,424	+				-1.8
1,368,449	-				-1.6
1,368,480	+				-2.6
1,368,480	+				+1.0
1,368,480	+				-0.7
1,368,498	-				-0.6
1,368,543	-				-1.7
1,368,594	-				-2.2
1,368,599	-				+1.0
1,368,599	-				+0.0
1,368,599	-				+0.2
1,368,599	-				-0.5
1,368,604	-				-1.7
1,368,606	-				-1.8
1,368,614	-				-2.8
1,368,631	+				+1.7
1,368,766	-				+0.1
1,368,812	-				-1.7
1,368,831	+				-0.6
1,368,831	+				+1.0
1,368,831	+				-1.8
1,368,831	+				-1.0
1,368,839	+				+1.0
1,368,849	+		Synpcc7942_1337	0.10	-0.6
1,368,849	+		Synpcc7942_1337	0.10	+1.0
1,368,873	-		Synpcc7942_1337	0.11	-0.6
1,368,898	+		Synpcc7942_1337	0.11	-0.1
1,368,927	+		Synpcc7942_1337	0.12	-1.4
1,368,969	-		Synpcc7942_1337	0.13	+0.0
1,368,971	+		Synpcc7942_1337	0.13	-0.7
1,368,991	-		Synpcc7942_1337	0.13	+1.0
1,369,029	+		Synpcc7942_1337	0.14	+0.4
1,369,044	+		Synpcc7942_1337	0.15	+1.6
1,369,044	+		Synpcc7942_1337	0.15	-0.3
1,369,052	+		Synpcc7942_1337	0.15	-0.3
1,369,062	+		Synpcc7942_1337	0.15	-2.8
1,369,063	+		Synpcc7942_1337	0.15	-0.6
1,369,098	-		Synpcc7942_1337	0.16	+0.6
1,369,111	+		Synpcc7942_1337	0.16	-1.0
1,369,125	+		Synpcc7942_1337	0.17	+0.0
1,369,158	-		Synpcc7942_1337	0.17	-0.6
1,369,174	+		Synpcc7942_1337	0.18	-0.3
1,369,174	+		Synpcc7942_1337	0.18	-2.4
1,369,174	+		Synpcc7942_1337	0.18	+0.0
1,369,182	-		Synpcc7942_1337	0.18	+0.6
1,369,182	-		Synpcc7942_1337	0.18	-0.8
1,369,199	+		Synpcc7942_1337	0.18	-1.3
1,369,209	-		Synpcc7942_1337	0.19	+0.7
1,369,213	+		Synpcc7942_1337	0.19	-2.1
1,369,233	-		Synpcc7942_1337	0.19	-2.7
1,369,238	-		Synpcc7942_1337	0.19	-0.7
1,369,238	-		Synpcc7942_1337	0.19	+0.3
1,369,238	-		Synpcc7942_1337	0.19	+0.7
1,369,238	-		Synpcc7942_1337	0.19	-0.6
1,369,245	-		Synpcc7942_1337	0.19	+2.0
1,369,290	+		Synpcc7942_1337	0.20	+1.8
1,369,332	+		Synpcc7942_1337	0.21	+1.0
1,369,332	+		Synpcc7942_1337	0.21	+0.0
1,369,332	+				-0.8
1,369,332	+		Synpcc7942_1337	0.21	-1.6
1,369,332	-				-0.1
1,369,340	-		Synpcc7942_1337	0.22	-1.3