Strain Fitness in Synechococcus elongatus PCC 7942 around Synpcc7942_1327

Experiment: Biofilm in Fresh BG11R in Flasks with Spin rep 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Biofilm in Fresh BG11R in Flasks with Spin rep 1
1,359,828	-	mfd	Synpcc7942_1326	0.75	+0.0
1,359,830	+	mfd	Synpcc7942_1326	0.75	-1.3
1,359,833	+	mfd	Synpcc7942_1326	0.75	-1.0
1,359,838	+	mfd	Synpcc7942_1326	0.75	-2.4
1,359,841	-	mfd	Synpcc7942_1326	0.75	+1.0
1,359,885	+	mfd	Synpcc7942_1326	0.77	-0.6
1,359,912	+	mfd	Synpcc7942_1326	0.77	-2.7
1,359,912	+	mfd	Synpcc7942_1326	0.77	-0.5
1,359,920	-	mfd	Synpcc7942_1326	0.78	-1.0
1,359,920	-	mfd	Synpcc7942_1326	0.78	-0.6
1,359,928	+	mfd	Synpcc7942_1326	0.78	+0.3
1,359,945	-	mfd	Synpcc7942_1326	0.78	+2.0
1,359,965	+	mfd	Synpcc7942_1326	0.79	+3.1
1,359,966	-	mfd	Synpcc7942_1326	0.79	+0.4
1,359,980	+	mfd	Synpcc7942_1326	0.79	-0.1
1,359,985	+	mfd	Synpcc7942_1326	0.80	-0.3
1,359,998	-	mfd	Synpcc7942_1326	0.80	+0.3
1,360,008	+				+1.0
1,360,040	+	mfd	Synpcc7942_1326	0.81	-0.7
1,360,043	-	mfd	Synpcc7942_1326	0.81	-0.3
1,360,046	-	mfd	Synpcc7942_1326	0.81	-1.0
1,360,048	-	mfd	Synpcc7942_1326	0.81	+1.3
1,360,057	+	mfd	Synpcc7942_1326	0.82	+2.0
1,360,062	+	mfd	Synpcc7942_1326	0.82	-0.6
1,360,073	+	mfd	Synpcc7942_1326	0.82	-0.6
1,360,107	+	mfd	Synpcc7942_1326	0.83	-0.6
1,360,122	+	mfd	Synpcc7942_1326	0.83	+0.7
1,360,122	+	mfd	Synpcc7942_1326	0.83	-2.0
1,360,130	-	mfd	Synpcc7942_1326	0.84	-0.6
1,360,130	-	mfd	Synpcc7942_1326	0.84	-1.3
1,360,130	-	mfd	Synpcc7942_1326	0.84	-1.4
1,360,131	+	mfd	Synpcc7942_1326	0.84	+4.2
1,360,136	+	mfd	Synpcc7942_1326	0.84	-0.8
1,360,139	-	mfd	Synpcc7942_1326	0.84	-0.6
1,360,144	-	mfd	Synpcc7942_1326	0.84	-1.6
1,360,144	-	mfd	Synpcc7942_1326	0.84	-0.3
1,360,155	+	mfd	Synpcc7942_1326	0.84	+0.6
1,360,155	+	mfd	Synpcc7942_1326	0.84	-1.3
1,360,155	+	mfd	Synpcc7942_1326	0.84	-0.8
1,360,163	-	mfd	Synpcc7942_1326	0.85	+1.0
1,360,163	-	mfd	Synpcc7942_1326	0.85	+0.0
1,360,163	-	mfd	Synpcc7942_1326	0.85	+1.0
1,360,188	-	mfd	Synpcc7942_1326	0.85	-0.3
1,360,210	+	mfd	Synpcc7942_1326	0.86	+2.5
1,360,223	+	mfd	Synpcc7942_1326	0.86	+2.0
1,360,230	-	mfd	Synpcc7942_1326	0.87	+1.0
1,360,230	-	mfd	Synpcc7942_1326	0.87	-0.2
1,360,242	+	mfd	Synpcc7942_1326	0.87	+0.0
1,360,250	-	mfd	Synpcc7942_1326	0.87	-0.4
1,360,297	+	mfd	Synpcc7942_1326	0.89	-1.6
1,360,300	-	mfd	Synpcc7942_1326	0.89	+1.0
1,360,392	+				+1.0
1,360,392	+				-2.1
1,360,424	-				-2.3
1,360,467	-				-0.6
1,360,470	+				+0.5
1,360,470	+				-3.0
1,360,478	-				+1.0
1,360,495	-				-0.6
1,360,558	-				-0.4
1,360,581	+				+1.0
1,360,596	+				-1.6
1,360,596	-				+1.0
1,360,602	-				+0.0
1,360,614	-				+1.0
1,360,741	+				+1.0
1,360,751	+				+1.0
1,360,751	+				-0.6
1,360,751	+				+1.0
1,360,751	+				+1.0
1,360,751	+				+2.0
1,360,751	+				+0.4
1,360,751	+				+1.0
1,360,751	+				+1.0
1,360,751	+				+1.0
1,360,751	+				+0.6
1,360,751	+				-0.6
1,360,759	-				+0.0
1,360,759	-				-0.6
1,360,759	-				+1.0
1,360,759	-				+1.0
1,360,759	-				-0.6
1,360,759	-				-0.6
1,360,759	-				-1.0
1,360,778	-				-0.3
1,360,778	-				+1.0
1,360,778	-				-0.6
1,360,778	-				+1.0
1,360,778	-				+0.0
1,360,804	-				+0.3
1,360,835	+				+1.0
1,360,948	-		Synpcc7942_1327	0.48	+0.0
1,360,948	-		Synpcc7942_1327	0.48	-0.6
1,360,984	+		Synpcc7942_1327	0.60	+1.0
1,360,984	+		Synpcc7942_1327	0.60	-1.6
1,360,992	-		Synpcc7942_1327	0.63	+2.0
1,361,007	+		Synpcc7942_1327	0.68	-0.6
1,361,063	-		Synpcc7942_1327	0.87	+1.0
1,361,094	-				+1.0
1,361,098	+				-0.2
1,361,098	+				-0.6
1,361,106	-				-1.9
1,361,110	+				-1.1
1,361,126	+				-1.6
1,361,129	-				-0.8
1,361,188	+				+0.0
1,361,203	+				+1.0
1,361,203	-				+1.6
1,361,240	+		Synpcc7942_1328	0.19	+1.0
1,361,266	-		Synpcc7942_1328	0.25	-1.1
1,361,268	+		Synpcc7942_1328	0.26	-0.7
1,361,268	+		Synpcc7942_1328	0.26	+1.1
1,361,276	-		Synpcc7942_1328	0.28	+0.2
1,361,278	-		Synpcc7942_1328	0.28	-0.8
1,361,293	+		Synpcc7942_1328	0.32	-1.8
1,361,315	-		Synpcc7942_1328	0.38	-1.4
1,361,315	-		Synpcc7942_1328	0.38	-0.6
1,361,315	-		Synpcc7942_1328	0.38	-1.1
1,361,354	-		Synpcc7942_1328	0.48	-3.5
1,361,371	+		Synpcc7942_1328	0.52	-0.7
1,361,379	-		Synpcc7942_1328	0.54	-1.8
1,361,379	-		Synpcc7942_1328	0.54	-0.8
1,361,408	+		Synpcc7942_1328	0.61	-0.8
1,361,418	+		Synpcc7942_1328	0.64	-1.9
1,361,419	-		Synpcc7942_1328	0.64	-0.9
1,361,426	-		Synpcc7942_1328	0.66	-0.0
1,361,428	+		Synpcc7942_1328	0.66	-1.6
1,361,431	-		Synpcc7942_1328	0.67	-3.0
1,361,513	+		Synpcc7942_1328	0.88	-2.3
1,361,513	+		Synpcc7942_1328	0.88	+2.0
1,361,513	+		Synpcc7942_1328	0.88	+2.8
1,361,521	-				-0.6
1,361,545	+				+1.0
1,361,548	-				-0.3
1,361,566	-				+1.0
1,361,566	-				+1.0
1,361,573	+				-0.1
1,361,573	+				+2.7
1,361,573	+				+0.0
1,361,578	+				-1.4
1,361,581	-				-3.1
1,361,581	-				-3.3
1,361,614	+				-2.2
1,361,615	+				-0.5
1,361,617	-				+2.3
1,361,617	-				-1.7
1,361,637	-				+0.0
1,361,641	+				-0.6
1,361,670	+				+0.0
1,361,678	-				-0.3
1,361,678	-				-1.7
1,361,678	-				+0.2
1,361,697	+				-1.0
1,361,704	-				-0.4
1,361,729	+				-0.5
1,361,783	-				-0.6
1,361,783	-				+2.0
1,361,799	-				+1.9
1,361,803	+				+0.9
1,361,804	+				+1.0
1,361,864	+				-0.8
1,361,864	+				-1.3
1,361,865	-				-3.0
1,361,870	+				+0.3
1,361,872	-				+1.0
1,361,878	-				-1.6
1,361,878	-				-2.0
1,361,878	-				+3.0
1,361,878	-				+0.0
1,361,883	-				+0.0
1,361,883	-				+1.6
1,361,883	-				-0.6
1,361,895	-				+2.2
1,361,909	+				+1.0
1,361,909	+				-0.1
1,361,915	+				+1.0
1,361,915	+				-1.6
1,361,915	+				-0.8
1,361,923	-				+0.4
1,361,923	-				-0.8
1,361,923	-				+1.0
1,361,923	-				+1.5
1,362,057	+		Synpcc7942_1329	0.28	+3.0
1,362,070	-		Synpcc7942_1329	0.30	+0.7