Strain Fitness in Synechococcus elongatus PCC 7942 around Synpcc7942_1204

Experiment: Biofilm in Fresh BG11R in Flasks with Spin rep 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Biofilm in Fresh BG11R in Flasks with Spin rep 1
1,232,479	+		Synpcc7942_1202	0.80	-2.5
1,232,479	+		Synpcc7942_1202	0.80	-1.8
1,232,485	+		Synpcc7942_1202	0.80	+2.6
1,232,489	-		Synpcc7942_1202	0.80	-2.3
1,232,493	-		Synpcc7942_1202	0.80	-0.3
1,232,500	+		Synpcc7942_1202	0.81	+3.8
1,232,540	+		Synpcc7942_1202	0.82	-1.8
1,232,540	+		Synpcc7942_1202	0.82	+0.0
1,232,548	-		Synpcc7942_1202	0.82	-2.0
1,232,548	-		Synpcc7942_1202	0.82	-1.2
1,232,562	+		Synpcc7942_1202	0.83	+3.3
1,232,585	-		Synpcc7942_1202	0.84	+0.0
1,232,593	+		Synpcc7942_1202	0.84	+1.0
1,232,593	+		Synpcc7942_1202	0.84	+1.6
1,232,601	-		Synpcc7942_1202	0.85	-1.7
1,232,609	-		Synpcc7942_1202	0.85	+0.4
1,232,619	+		Synpcc7942_1202	0.85	-0.8
1,232,627	-		Synpcc7942_1202	0.86	-0.7
1,232,627	-		Synpcc7942_1202	0.86	-1.2
1,232,651	+		Synpcc7942_1202	0.87	+0.0
1,232,651	+		Synpcc7942_1202	0.87	+1.0
1,232,659	-		Synpcc7942_1202	0.87	-0.7
1,232,659	-		Synpcc7942_1202	0.87	-1.4
1,232,659	-		Synpcc7942_1202	0.87	-2.9
1,232,688	+		Synpcc7942_1202	0.88	+0.0
1,232,699	+		Synpcc7942_1202	0.89	-0.6
1,232,726	-		Synpcc7942_1202	0.90	-0.6
1,232,802	+				-0.5
1,232,804	+				-1.6
1,232,850	-				+1.0
1,232,883	+				-1.3
1,232,884	-				-0.5
1,232,899	+				-0.6
1,232,899	+				+1.0
1,232,899	+				-2.1
1,232,900	+				-0.9
1,232,900	+				+0.1
1,232,907	-				-1.6
1,232,907	-				+2.0
1,232,907	-				-0.8
1,232,924	+				-1.4
1,232,924	+				-0.8
1,232,924	+				-0.7
1,232,980	+				-0.5
1,233,035	-				-0.6
1,233,041	-				+1.7
1,233,041	-				+1.2
1,233,058	+				+0.4
1,233,064	+				+1.0
1,233,087	+				+1.6
1,233,158	+				-1.3
1,233,158	+		Synpcc7942_1203	0.26	-0.8
1,233,158	+		Synpcc7942_1203	0.26	-0.1
1,233,166	-		Synpcc7942_1203	0.28	-0.5
1,233,166	-		Synpcc7942_1203	0.28	+3.0
1,233,172	+		Synpcc7942_1203	0.29	-0.5
1,233,172	+		Synpcc7942_1203	0.29	+1.0
1,233,180	-		Synpcc7942_1203	0.31	+1.5
1,233,198	-		Synpcc7942_1203	0.36	-3.6
1,233,223	-		Synpcc7942_1203	0.42	-0.5
1,233,242	-		Synpcc7942_1203	0.46	-3.1
1,233,248	+		Synpcc7942_1203	0.48	-1.9
1,233,283	-		Synpcc7942_1203	0.56	+0.1
1,233,285	+		Synpcc7942_1203	0.57	-0.7
1,233,304	+		Synpcc7942_1203	0.61	-1.1
1,233,314	+		Synpcc7942_1203	0.64	-0.9
1,233,317	-		Synpcc7942_1203	0.64	+0.7
1,233,320	+		Synpcc7942_1203	0.65	-1.2
1,233,343	+		Synpcc7942_1203	0.71	-2.7
1,233,346	+		Synpcc7942_1203	0.71	-1.1
1,233,354	-		Synpcc7942_1203	0.73	-0.8
1,233,360	+		Synpcc7942_1203	0.75	+2.3
1,233,366	-		Synpcc7942_1203	0.76	+0.0
1,233,390	+		Synpcc7942_1203	0.82	-0.6
1,233,398	-		Synpcc7942_1203	0.84	-0.1
1,233,398	-		Synpcc7942_1203	0.84	-0.3
1,233,407	+		Synpcc7942_1203	0.86	-1.3
1,233,429	+				-0.5
1,233,429	+				-1.3
1,233,437	-				+1.2
1,233,437	-				+1.4
1,233,437	-				+0.6
1,233,443	+				+1.6
1,233,452	+				-2.6
1,233,452	+				-0.5
1,233,458	+				-1.1
1,233,476	+				+1.0
1,233,476	+				-0.8
1,233,495	+		Synpcc7942_1204	0.11	-0.2
1,233,503	-		Synpcc7942_1204	0.14	-1.5
1,233,503	-		Synpcc7942_1204	0.14	-0.6
1,233,531	+		Synpcc7942_1204	0.23	-1.9
1,233,539	-		Synpcc7942_1204	0.25	-2.2
1,233,539	-		Synpcc7942_1204	0.25	+0.4
1,233,567	+		Synpcc7942_1204	0.34	-0.9
1,233,575	-		Synpcc7942_1204	0.37	-1.8
1,233,575	-		Synpcc7942_1204	0.37	+0.2
1,233,575	-		Synpcc7942_1204	0.37	-2.0
1,233,575	-		Synpcc7942_1204	0.37	-0.2
1,233,576	+		Synpcc7942_1204	0.37	+0.2
1,233,655	-		Synpcc7942_1204	0.62	+2.0
1,233,657	+		Synpcc7942_1204	0.63	-0.3
1,233,667	-		Synpcc7942_1204	0.66	-2.2
1,233,687	+				-1.3
1,233,695	-		Synpcc7942_1204	0.75	-1.3
1,233,701	-		Synpcc7942_1204	0.77	-1.1
1,233,730	+		Synpcc7942_1204	0.86	-3.6
1,233,730	+		Synpcc7942_1204	0.86	+1.3
1,233,738	-		Synpcc7942_1204	0.88	-0.8
1,233,738	-		Synpcc7942_1204	0.88	+0.3
1,233,738	-		Synpcc7942_1204	0.88	+0.0
1,233,749	-				-1.6
1,233,765	-				+0.0
1,233,808	+		Synpcc7942_1205	0.20	-0.4
1,233,813	+		Synpcc7942_1205	0.23	+0.0
1,233,816	-		Synpcc7942_1205	0.25	+0.4
1,233,816	-		Synpcc7942_1205	0.25	-0.7
1,233,822	-		Synpcc7942_1205	0.28	+1.0
1,233,832	+		Synpcc7942_1205	0.35	+1.0
1,233,832	+		Synpcc7942_1205	0.35	+1.0
1,233,832	+		Synpcc7942_1205	0.35	+1.6
1,233,832	+		Synpcc7942_1205	0.35	-1.3
1,233,840	-		Synpcc7942_1205	0.39	+1.0
1,233,842	+				-1.8
1,233,842	+		Synpcc7942_1205	0.41	-2.1
1,233,842	+		Synpcc7942_1205	0.41	-3.2
1,233,842	+		Synpcc7942_1205	0.41	-0.6
1,233,842	+		Synpcc7942_1205	0.41	-1.0
1,233,850	-		Synpcc7942_1205	0.45	-2.8
1,233,850	-		Synpcc7942_1205	0.45	-1.6
1,233,850	-		Synpcc7942_1205	0.45	+0.1
1,233,850	-		Synpcc7942_1205	0.45	+1.0
1,233,850	-		Synpcc7942_1205	0.45	-1.5
1,233,860	-		Synpcc7942_1205	0.52	-0.4
1,233,871	+		Synpcc7942_1205	0.58	-0.6
1,233,873	+		Synpcc7942_1205	0.59	+0.4
1,233,873	+		Synpcc7942_1205	0.59	+1.4
1,233,873	+		Synpcc7942_1205	0.59	+1.0
1,233,876	+		Synpcc7942_1205	0.61	-1.9
1,233,879	-		Synpcc7942_1205	0.63	-1.9
1,233,881	-		Synpcc7942_1205	0.64	+1.5
1,233,881	-		Synpcc7942_1205	0.64	+0.3
1,233,881	-		Synpcc7942_1205	0.64	+0.3
1,233,881	-		Synpcc7942_1205	0.64	-0.1
1,233,885	+		Synpcc7942_1205	0.67	-0.7
1,233,898	-		Synpcc7942_1205	0.75	-2.4
1,233,922	+		Synpcc7942_1205	0.89	-0.7
1,233,922	+		Synpcc7942_1205	0.89	-2.2
1,233,930	-				-2.0
1,233,968	-		Synpcc7942_1206	0.12	+1.0
1,233,974	+		Synpcc7942_1206	0.14	-0.3
1,233,983	-		Synpcc7942_1206	0.17	-0.6
1,233,983	-		Synpcc7942_1206	0.17	+1.0
1,234,137	+		Synpcc7942_1206	0.73	+0.3
1,234,139	+		Synpcc7942_1206	0.74	-1.0
1,234,278	+				-1.1
1,234,286	-				+1.5
1,234,335	+				+0.0
1,234,343	-				+1.0
1,234,343	-				+1.0
1,234,347	+				+2.5
1,234,349	+				-1.5
1,234,400	-		Synpcc7942_1207	0.23	-0.7
1,234,451	+		Synpcc7942_1207	0.43	-0.2
1,234,453	-		Synpcc7942_1207	0.44	-0.5
1,234,486	-		Synpcc7942_1207	0.56	+0.2
1,234,523	+		Synpcc7942_1207	0.70	+0.0
1,234,531	-		Synpcc7942_1207	0.73	+0.8
1,234,531	-		Synpcc7942_1207	0.73	+0.0
1,234,539	+		Synpcc7942_1207	0.76	+1.0
1,234,542	-		Synpcc7942_1207	0.77	-0.4
1,234,542	-				-0.3
1,234,575	-				+1.9
1,234,631	+		Synpcc7942_1208	0.15	+2.0
1,234,631	+		Synpcc7942_1208	0.15	-1.1
1,234,639	-		Synpcc7942_1208	0.18	-0.9