Strain Fitness in Synechococcus elongatus PCC 7942 around Synpcc7942_1202

Experiment: Biofilm in Fresh BG11R in Flasks with Spin rep 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Biofilm in Fresh BG11R in Flasks with Spin rep 1
1,229,518	+		Synpcc7942_1201	0.31	+0.0
1,229,524	+		Synpcc7942_1201	0.31	-1.0
1,229,566	-		Synpcc7942_1201	0.34	-1.0
1,229,588	+		Synpcc7942_1201	0.36	-1.9
1,229,588	+		Synpcc7942_1201	0.36	+0.5
1,229,588	+		Synpcc7942_1201	0.36	+1.0
1,229,588	+		Synpcc7942_1201	0.36	+2.0
1,229,588	+		Synpcc7942_1201	0.36	-1.5
1,229,596	-		Synpcc7942_1201	0.36	-1.5
1,229,596	-		Synpcc7942_1201	0.36	+0.4
1,229,634	+		Synpcc7942_1201	0.39	-1.0
1,229,640	-		Synpcc7942_1201	0.39	-0.6
1,229,642	-		Synpcc7942_1201	0.39	-0.3
1,229,652	-		Synpcc7942_1201	0.40	-0.6
1,229,675	-		Synpcc7942_1201	0.42	+0.0
1,229,702	+		Synpcc7942_1201	0.44	+1.0
1,229,707	+		Synpcc7942_1201	0.44	+0.0
1,229,710	-		Synpcc7942_1201	0.44	+1.0
1,229,725	+		Synpcc7942_1201	0.45	+0.4
1,229,725	-		Synpcc7942_1201	0.45	-1.6
1,229,728	-		Synpcc7942_1201	0.45	+1.0
1,229,838	+		Synpcc7942_1201	0.53	-0.5
1,229,860	+		Synpcc7942_1201	0.55	-0.7
1,229,869	+		Synpcc7942_1201	0.55	-1.0
1,229,947	-		Synpcc7942_1201	0.61	-0.7
1,229,994	-		Synpcc7942_1201	0.64	-1.1
1,229,998	-		Synpcc7942_1201	0.64	+1.4
1,230,014	+		Synpcc7942_1201	0.65	+0.0
1,230,097	-		Synpcc7942_1201	0.71	+0.0
1,230,097	-		Synpcc7942_1201	0.71	+1.0
1,230,125	-		Synpcc7942_1201	0.73	+1.0
1,230,125	-		Synpcc7942_1201	0.73	-0.3
1,230,135	-		Synpcc7942_1201	0.74	+1.0
1,230,146	-		Synpcc7942_1201	0.75	-1.6
1,230,211	+		Synpcc7942_1201	0.79	-2.9
1,230,253	+				+0.0
1,230,261	-		Synpcc7942_1201	0.83	+1.0
1,230,263	+		Synpcc7942_1201	0.83	+1.0
1,230,330	-		Synpcc7942_1201	0.87	+1.0
1,230,344	+		Synpcc7942_1201	0.88	-1.0
1,230,349	+		Synpcc7942_1201	0.89	-0.9
1,230,352	-		Synpcc7942_1201	0.89	-1.7
1,230,352	-		Synpcc7942_1201	0.89	+1.0
1,230,370	+				+0.4
1,230,459	+				-1.5
1,230,510	+				+1.0
1,230,516	-				+0.4
1,230,518	-				-1.4
1,230,553	+				-1.8
1,230,553	+				-0.6
1,230,557	+				-0.7
1,230,557	+				+1.0
1,230,561	-				-0.6
1,230,561	-				+2.4
1,230,561	-				-1.0
1,230,561	-				-0.6
1,230,561	-				+0.2
1,230,562	+				-0.8
1,230,570	-				+0.0
1,230,606	+				+1.0
1,230,611	+				-0.4
1,230,619	-				-2.2
1,230,619	-				+1.0
1,230,623	+				+0.3
1,230,643	-				+0.0
1,230,663	-				-1.6
1,230,670	+				+0.0
1,230,675	-				+1.0
1,230,678	-				-2.8
1,230,687	+				+1.0
1,230,708	+				+0.8
1,230,717	+				-1.0
1,230,717	+				+0.7
1,230,738	+				-1.9
1,230,743	+				-0.7
1,230,768	+		Synpcc7942_1202	0.10	+0.0
1,230,768	+		Synpcc7942_1202	0.10	-0.8
1,230,787	+		Synpcc7942_1202	0.11	+2.0
1,230,787	+		Synpcc7942_1202	0.11	+0.4
1,230,795	-		Synpcc7942_1202	0.11	-0.4
1,230,851	+		Synpcc7942_1202	0.14	-0.3
1,230,855	+		Synpcc7942_1202	0.14	+1.0
1,230,855	+		Synpcc7942_1202	0.14	-2.2
1,230,863	-		Synpcc7942_1202	0.14	+1.7
1,230,863	-		Synpcc7942_1202	0.14	-0.6
1,230,863	-		Synpcc7942_1202	0.14	+1.0
1,230,873	-		Synpcc7942_1202	0.15	-1.3
1,230,895	+		Synpcc7942_1202	0.16	-1.8
1,230,922	-		Synpcc7942_1202	0.17	-1.7
1,230,922	-		Synpcc7942_1202	0.17	-1.1
1,230,924	+		Synpcc7942_1202	0.17	+1.0
1,230,924	+		Synpcc7942_1202	0.17	+1.0
1,230,924	+		Synpcc7942_1202	0.17	+1.0
1,230,924	+		Synpcc7942_1202	0.17	-0.3
1,230,924	+		Synpcc7942_1202	0.17	-0.6
1,230,924	+		Synpcc7942_1202	0.17	-1.8
1,230,926	+		Synpcc7942_1202	0.17	+1.0
1,230,932	-		Synpcc7942_1202	0.17	-1.3
1,230,932	-		Synpcc7942_1202	0.17	-1.0
1,230,932	-		Synpcc7942_1202	0.17	-0.3
1,230,932	-		Synpcc7942_1202	0.17	+1.0
1,230,934	-		Synpcc7942_1202	0.17	+1.6
1,230,934	-		Synpcc7942_1202	0.17	+0.0
1,230,934	-		Synpcc7942_1202	0.17	-1.9
1,230,936	+		Synpcc7942_1202	0.17	-1.0
1,230,937	+		Synpcc7942_1202	0.17	+2.3
1,230,944	-		Synpcc7942_1202	0.17	-1.2
1,230,944	-		Synpcc7942_1202	0.17	-1.3
1,230,954	+		Synpcc7942_1202	0.18	+1.0
1,231,036	-		Synpcc7942_1202	0.21	-2.5
1,231,078	+		Synpcc7942_1202	0.23	-2.2
1,231,081	+		Synpcc7942_1202	0.23	+0.0
1,231,103	+		Synpcc7942_1202	0.24	-2.7
1,231,103	-		Synpcc7942_1202	0.24	-1.6
1,231,126	-		Synpcc7942_1202	0.25	+2.0
1,231,148	+		Synpcc7942_1202	0.26	+1.0
1,231,155	+		Synpcc7942_1202	0.26	-1.1
1,231,155	+		Synpcc7942_1202	0.26	-2.3
1,231,156	-		Synpcc7942_1202	0.26	-0.9
1,231,156	-		Synpcc7942_1202	0.26	+0.0
1,231,163	-		Synpcc7942_1202	0.26	+0.0
1,231,163	-		Synpcc7942_1202	0.26	-0.9
1,231,166	+		Synpcc7942_1202	0.26	-2.1
1,231,169	-		Synpcc7942_1202	0.27	-1.8
1,231,174	-		Synpcc7942_1202	0.27	-1.6
1,231,175	+		Synpcc7942_1202	0.27	+1.0
1,231,191	+		Synpcc7942_1202	0.28	+2.0
1,231,223	+		Synpcc7942_1202	0.29	+1.0
1,231,236	+		Synpcc7942_1202	0.29	+1.0
1,231,275	-		Synpcc7942_1202	0.31	+0.0
1,231,275	-		Synpcc7942_1202	0.31	-2.0
1,231,300	+		Synpcc7942_1202	0.32	-2.6
1,231,314	+		Synpcc7942_1202	0.32	-0.6
1,231,315	-		Synpcc7942_1202	0.33	+1.0
1,231,339	+		Synpcc7942_1202	0.33	+2.0
1,231,339	+		Synpcc7942_1202	0.33	-2.1
1,231,347	+		Synpcc7942_1202	0.34	+1.7
1,231,349	+		Synpcc7942_1202	0.34	-1.9
1,231,370	+		Synpcc7942_1202	0.35	+1.1
1,231,370	-		Synpcc7942_1202	0.35	-0.9
1,231,378	-		Synpcc7942_1202	0.35	+0.1
1,231,378	-		Synpcc7942_1202	0.35	-1.4
1,231,378	-		Synpcc7942_1202	0.35	-1.1
1,231,378	-		Synpcc7942_1202	0.35	+1.3
1,231,393	+		Synpcc7942_1202	0.36	-1.2
1,231,411	-		Synpcc7942_1202	0.36	-0.3
1,231,447	-		Synpcc7942_1202	0.38	-1.0
1,231,469	-		Synpcc7942_1202	0.39	-1.4
1,231,478	+		Synpcc7942_1202	0.39	-2.5
1,231,488	+		Synpcc7942_1202	0.40	+0.0
1,231,526	+				-1.6
1,231,593	+		Synpcc7942_1202	0.44	-2.5
1,231,611	-		Synpcc7942_1202	0.45	-1.3
1,231,625	-		Synpcc7942_1202	0.45	-2.1
1,231,632	+		Synpcc7942_1202	0.45	-0.3
1,231,632	-		Synpcc7942_1202	0.45	-2.2
1,231,634	+		Synpcc7942_1202	0.45	-1.7
1,231,642	-		Synpcc7942_1202	0.46	-1.0
1,231,660	-		Synpcc7942_1202	0.46	-3.2
1,231,726	+		Synpcc7942_1202	0.49	-1.6
1,231,727	+		Synpcc7942_1202	0.49	+1.0
1,231,728	+		Synpcc7942_1202	0.49	+1.0
1,231,730	-		Synpcc7942_1202	0.49	-0.8
1,231,736	-		Synpcc7942_1202	0.50	-0.2
1,231,813	+		Synpcc7942_1202	0.53	-0.6
1,231,819	+		Synpcc7942_1202	0.53	+0.0
1,231,821	-		Synpcc7942_1202	0.53	+1.3
1,231,832	-		Synpcc7942_1202	0.53	-2.0
1,231,837	+		Synpcc7942_1202	0.54	+1.0
1,231,847	-		Synpcc7942_1202	0.54	+1.0
1,231,882	+		Synpcc7942_1202	0.55	-1.6
1,231,890	-		Synpcc7942_1202	0.56	+1.0
1,231,921	+		Synpcc7942_1202	0.57	-1.3
1,231,921	+		Synpcc7942_1202	0.57	+1.0
1,231,921	+		Synpcc7942_1202	0.57	+0.0
1,231,921	+		Synpcc7942_1202	0.57	+0.0
1,231,921	+		Synpcc7942_1202	0.57	-2.1
1,231,921	+		Synpcc7942_1202	0.57	+0.3
1,231,929	-		Synpcc7942_1202	0.57	-1.4
1,231,929	-		Synpcc7942_1202	0.57	+0.0
1,231,929	-		Synpcc7942_1202	0.57	-0.2
1,231,943	+		Synpcc7942_1202	0.58	-1.0
1,231,951	-		Synpcc7942_1202	0.58	-2.7
1,231,987	-		Synpcc7942_1202	0.60	-0.6
1,231,987	-		Synpcc7942_1202	0.60	+1.2
1,232,034	-		Synpcc7942_1202	0.62	+0.7
1,232,046	-		Synpcc7942_1202	0.62	+1.0
1,232,071	+		Synpcc7942_1202	0.63	+0.3
1,232,107	+		Synpcc7942_1202	0.65	-1.7
1,232,145	+		Synpcc7942_1202	0.66	-1.1
1,232,179	-		Synpcc7942_1202	0.68	-0.7
1,232,208	+		Synpcc7942_1202	0.69	+0.6
1,232,216	-		Synpcc7942_1202	0.69	-0.6
1,232,220	+		Synpcc7942_1202	0.69	-1.5
1,232,228	+		Synpcc7942_1202	0.70	-0.3
1,232,233	-		Synpcc7942_1202	0.70	-1.7
1,232,277	-		Synpcc7942_1202	0.71	+1.0
1,232,297	+		Synpcc7942_1202	0.72	+1.0
1,232,305	-		Synpcc7942_1202	0.73	+1.0
1,232,339	-		Synpcc7942_1202	0.74	-2.3
1,232,361	-		Synpcc7942_1202	0.75	-2.2
1,232,372	-		Synpcc7942_1202	0.75	+1.0
1,232,421	-		Synpcc7942_1202	0.77	+0.8
1,232,446	+		Synpcc7942_1202	0.78	+0.0
1,232,452	+		Synpcc7942_1202	0.79	+1.0
1,232,454	-		Synpcc7942_1202	0.79	+1.7
1,232,454	-		Synpcc7942_1202	0.79	+1.0
1,232,479	+		Synpcc7942_1202	0.80	-2.5
1,232,479	+		Synpcc7942_1202	0.80	-1.8
1,232,485	+		Synpcc7942_1202	0.80	+2.6
1,232,489	-		Synpcc7942_1202	0.80	-2.3
1,232,493	-		Synpcc7942_1202	0.80	-0.3
1,232,500	+		Synpcc7942_1202	0.81	+3.8
1,232,540	+		Synpcc7942_1202	0.82	-1.8
1,232,540	+		Synpcc7942_1202	0.82	+0.0
1,232,548	-		Synpcc7942_1202	0.82	-2.0
1,232,548	-		Synpcc7942_1202	0.82	-1.2
1,232,562	+		Synpcc7942_1202	0.83	+3.3
1,232,585	-		Synpcc7942_1202	0.84	+0.0
1,232,593	+		Synpcc7942_1202	0.84	+1.0
1,232,593	+		Synpcc7942_1202	0.84	+1.6
1,232,601	-		Synpcc7942_1202	0.85	-1.7
1,232,609	-		Synpcc7942_1202	0.85	+0.4
1,232,619	+		Synpcc7942_1202	0.85	-0.8
1,232,627	-		Synpcc7942_1202	0.86	-0.7
1,232,627	-		Synpcc7942_1202	0.86	-1.2
1,232,651	+		Synpcc7942_1202	0.87	+0.0
1,232,651	+		Synpcc7942_1202	0.87	+1.0
1,232,659	-		Synpcc7942_1202	0.87	-0.7
1,232,659	-		Synpcc7942_1202	0.87	-1.4
1,232,659	-		Synpcc7942_1202	0.87	-2.9
1,232,688	+		Synpcc7942_1202	0.88	+0.0
1,232,699	+		Synpcc7942_1202	0.89	-0.6
1,232,726	-		Synpcc7942_1202	0.90	-0.6
1,232,802	+				-0.5
1,232,804	+				-1.6
1,232,850	-				+1.0
1,232,883	+				-1.3
1,232,884	-				-0.5
1,232,899	+				-0.6
1,232,899	+				+1.0
1,232,899	+				-2.1
1,232,900	+				-0.9
1,232,900	+				+0.1
1,232,907	-				-1.6
1,232,907	-				+2.0
1,232,907	-				-0.8
1,232,924	+				-1.4
1,232,924	+				-0.8
1,232,924	+				-0.7
1,232,980	+				-0.5
1,233,035	-				-0.6
1,233,041	-				+1.7
1,233,041	-				+1.2
1,233,058	+				+0.4
1,233,064	+				+1.0
1,233,087	+				+1.6
1,233,158	+				-1.3
1,233,158	+		Synpcc7942_1203	0.26	-0.8
1,233,158	+		Synpcc7942_1203	0.26	-0.1
1,233,166	-		Synpcc7942_1203	0.28	-0.5
1,233,166	-		Synpcc7942_1203	0.28	+3.0
1,233,172	+		Synpcc7942_1203	0.29	-0.5
1,233,172	+		Synpcc7942_1203	0.29	+1.0
1,233,180	-		Synpcc7942_1203	0.31	+1.5
1,233,198	-		Synpcc7942_1203	0.36	-3.6
1,233,223	-		Synpcc7942_1203	0.42	-0.5
1,233,242	-		Synpcc7942_1203	0.46	-3.1
1,233,248	+		Synpcc7942_1203	0.48	-1.9
1,233,283	-		Synpcc7942_1203	0.56	+0.1
1,233,285	+		Synpcc7942_1203	0.57	-0.7
1,233,304	+		Synpcc7942_1203	0.61	-1.1
1,233,314	+		Synpcc7942_1203	0.64	-0.9
1,233,317	-		Synpcc7942_1203	0.64	+0.7
1,233,320	+		Synpcc7942_1203	0.65	-1.2
1,233,343	+		Synpcc7942_1203	0.71	-2.7
1,233,346	+		Synpcc7942_1203	0.71	-1.1
1,233,354	-		Synpcc7942_1203	0.73	-0.8
1,233,360	+		Synpcc7942_1203	0.75	+2.3
1,233,366	-		Synpcc7942_1203	0.76	+0.0
1,233,390	+		Synpcc7942_1203	0.82	-0.6
1,233,398	-		Synpcc7942_1203	0.84	-0.1
1,233,398	-		Synpcc7942_1203	0.84	-0.3
1,233,407	+		Synpcc7942_1203	0.86	-1.3
1,233,429	+				-0.5
1,233,429	+				-1.3
1,233,437	-				+1.2
1,233,437	-				+1.4
1,233,437	-				+0.6
1,233,443	+				+1.6
1,233,452	+				-2.6
1,233,452	+				-0.5
1,233,458	+				-1.1
1,233,476	+				+1.0
1,233,476	+				-0.8
1,233,495	+		Synpcc7942_1204	0.11	-0.2
1,233,503	-		Synpcc7942_1204	0.14	-1.5
1,233,503	-		Synpcc7942_1204	0.14	-0.6
1,233,531	+		Synpcc7942_1204	0.23	-1.9
1,233,539	-		Synpcc7942_1204	0.25	-2.2
1,233,539	-		Synpcc7942_1204	0.25	+0.4
1,233,567	+		Synpcc7942_1204	0.34	-0.9
1,233,575	-		Synpcc7942_1204	0.37	-1.8
1,233,575	-		Synpcc7942_1204	0.37	+0.2
1,233,575	-		Synpcc7942_1204	0.37	-2.0
1,233,575	-		Synpcc7942_1204	0.37	-0.2
1,233,576	+		Synpcc7942_1204	0.37	+0.2
1,233,655	-		Synpcc7942_1204	0.62	+2.0
1,233,657	+		Synpcc7942_1204	0.63	-0.3
1,233,667	-		Synpcc7942_1204	0.66	-2.2
1,233,687	+				-1.3
1,233,695	-		Synpcc7942_1204	0.75	-1.3
1,233,701	-		Synpcc7942_1204	0.77	-1.1
1,233,730	+		Synpcc7942_1204	0.86	-3.6
1,233,730	+		Synpcc7942_1204	0.86	+1.3
1,233,738	-		Synpcc7942_1204	0.88	-0.8
1,233,738	-		Synpcc7942_1204	0.88	+0.3
1,233,738	-		Synpcc7942_1204	0.88	+0.0
1,233,749	-				-1.6
1,233,765	-				+0.0
1,233,808	+		Synpcc7942_1205	0.20	-0.4
1,233,813	+		Synpcc7942_1205	0.23	+0.0
1,233,816	-		Synpcc7942_1205	0.25	+0.4
1,233,816	-		Synpcc7942_1205	0.25	-0.7
1,233,822	-		Synpcc7942_1205	0.28	+1.0
1,233,832	+		Synpcc7942_1205	0.35	+1.0
1,233,832	+		Synpcc7942_1205	0.35	+1.0
1,233,832	+		Synpcc7942_1205	0.35	+1.6
1,233,832	+		Synpcc7942_1205	0.35	-1.3
1,233,840	-		Synpcc7942_1205	0.39	+1.0
1,233,842	+				-1.8
1,233,842	+		Synpcc7942_1205	0.41	-2.1
1,233,842	+		Synpcc7942_1205	0.41	-3.2
1,233,842	+		Synpcc7942_1205	0.41	-0.6
1,233,842	+		Synpcc7942_1205	0.41	-1.0
1,233,850	-		Synpcc7942_1205	0.45	-2.8
1,233,850	-		Synpcc7942_1205	0.45	-1.6
1,233,850	-		Synpcc7942_1205	0.45	+0.1
1,233,850	-		Synpcc7942_1205	0.45	+1.0
1,233,850	-		Synpcc7942_1205	0.45	-1.5
1,233,860	-		Synpcc7942_1205	0.52	-0.4
1,233,871	+		Synpcc7942_1205	0.58	-0.6
1,233,873	+		Synpcc7942_1205	0.59	+0.4
1,233,873	+		Synpcc7942_1205	0.59	+1.4
1,233,873	+		Synpcc7942_1205	0.59	+1.0
1,233,876	+		Synpcc7942_1205	0.61	-1.9
1,233,879	-		Synpcc7942_1205	0.63	-1.9
1,233,881	-		Synpcc7942_1205	0.64	+1.5
1,233,881	-		Synpcc7942_1205	0.64	+0.3
1,233,881	-		Synpcc7942_1205	0.64	+0.3
1,233,881	-		Synpcc7942_1205	0.64	-0.1
1,233,885	+		Synpcc7942_1205	0.67	-0.7
1,233,898	-		Synpcc7942_1205	0.75	-2.4
1,233,922	+		Synpcc7942_1205	0.89	-0.7
1,233,922	+		Synpcc7942_1205	0.89	-2.2
1,233,930	-				-2.0
1,233,968	-		Synpcc7942_1206	0.12	+1.0
1,233,974	+		Synpcc7942_1206	0.14	-0.3