Strain Fitness in Synechococcus elongatus PCC 7942 around Synpcc7942_1169

Experiment: Biofilm in Fresh BG11R in Flasks with Spin rep 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Biofilm in Fresh BG11R in Flasks with Spin rep 1
1,201,138	+		Synpcc7942_1167	0.65	-1.4
1,201,247	-		Synpcc7942_1167	0.85	+0.3
1,201,278	-				-1.0
1,201,318	+				-3.2
1,201,325	+				+1.8
1,201,326	-				-0.0
1,201,419	+	cpmA	Synpcc7942_1168	0.12	+1.0
1,201,541	+	cpmA	Synpcc7942_1168	0.27	+1.0
1,201,549	-	cpmA	Synpcc7942_1168	0.28	-1.0
1,201,624	+	cpmA	Synpcc7942_1168	0.38	+1.0
1,202,031	+				+1.0
1,202,032	+				+1.0
1,202,083	+				-1.0
1,202,083	+				-0.3
1,202,112	+				-0.5
1,202,150	+				-0.7
1,202,156	-				-1.2
1,202,170	-				-1.3
1,202,173	+				+0.8
1,202,181	-				-1.0
1,202,191	-				+0.1
1,202,191	-				-2.2
1,202,191	-				+0.7
1,202,218	+				+1.1
1,202,237	-				-1.0
1,202,469	-		Synpcc7942_1169	0.21	+0.3
1,202,481	-		Synpcc7942_1169	0.21	-1.1
1,202,538	-		Synpcc7942_1169	0.25	-1.0
1,202,538	-		Synpcc7942_1169	0.25	+1.0
1,202,538	-		Synpcc7942_1169	0.25	-1.8
1,202,568	+		Synpcc7942_1169	0.26	-2.7
1,202,568	+		Synpcc7942_1169	0.26	-2.7
1,202,576	-		Synpcc7942_1169	0.27	-1.3
1,202,608	+		Synpcc7942_1169	0.29	-0.0
1,202,625	+		Synpcc7942_1169	0.30	-0.9
1,202,640	-		Synpcc7942_1169	0.30	+1.0
1,202,642	+		Synpcc7942_1169	0.31	+0.4
1,202,650	-		Synpcc7942_1169	0.31	-0.3
1,202,666	+		Synpcc7942_1169	0.32	-1.3
1,202,726	+		Synpcc7942_1169	0.35	-0.7
1,202,726	+		Synpcc7942_1169	0.35	-0.0
1,202,797	-		Synpcc7942_1169	0.39	-2.5
1,202,802	-		Synpcc7942_1169	0.40	+1.0
1,202,802	-		Synpcc7942_1169	0.40	+1.0
1,202,913	+		Synpcc7942_1169	0.46	+0.4
1,202,920	-		Synpcc7942_1169	0.46	-0.6
1,202,968	+		Synpcc7942_1169	0.49	+1.0
1,202,968	+		Synpcc7942_1169	0.49	+1.0
1,202,979	+		Synpcc7942_1169	0.50	-1.0
1,202,979	+		Synpcc7942_1169	0.50	-1.8
1,202,979	+		Synpcc7942_1169	0.50	-2.3
1,202,979	+		Synpcc7942_1169	0.50	-0.8
1,202,979	+		Synpcc7942_1169	0.50	+1.0
1,202,979	+		Synpcc7942_1169	0.50	+2.0
1,202,987	-		Synpcc7942_1169	0.50	-2.0
1,203,085	+		Synpcc7942_1169	0.56	-1.3
1,203,132	+		Synpcc7942_1169	0.58	+2.0
1,203,303	+		Synpcc7942_1169	0.68	-0.6
1,203,331	-		Synpcc7942_1169	0.70	-2.8
1,203,334	-		Synpcc7942_1169	0.70	-0.0
1,203,365	-		Synpcc7942_1169	0.72	+3.2
1,203,370	+		Synpcc7942_1169	0.72	-1.0
1,203,384	-		Synpcc7942_1169	0.73	+0.5
1,203,423	+		Synpcc7942_1169	0.75	+1.0
1,203,423	+		Synpcc7942_1169	0.75	-0.2
1,203,431	-		Synpcc7942_1169	0.75	+1.0
1,203,431	-		Synpcc7942_1169	0.75	+0.8
1,203,431	-		Synpcc7942_1169	0.75	-1.9
1,203,431	-		Synpcc7942_1169	0.75	-0.8
1,203,478	+		Synpcc7942_1169	0.78	-1.3
1,203,503	+		Synpcc7942_1169	0.79	+1.0
1,203,531	+		Synpcc7942_1169	0.81	-0.3
1,203,531	+		Synpcc7942_1169	0.81	-1.8
1,203,539	-		Synpcc7942_1169	0.81	+1.0
1,203,539	-		Synpcc7942_1169	0.81	-0.6
1,203,544	-		Synpcc7942_1169	0.82	+1.0
1,203,554	+		Synpcc7942_1169	0.82	+1.0
1,203,554	+		Synpcc7942_1169	0.82	-0.0
1,203,562	-		Synpcc7942_1169	0.83	-0.0
1,203,597	+		Synpcc7942_1169	0.85	-1.0
1,203,627	+		Synpcc7942_1169	0.86	+1.0
1,203,659	+		Synpcc7942_1169	0.88	-1.8
1,203,659	+		Synpcc7942_1169	0.88	-0.0
1,203,659	+		Synpcc7942_1169	0.88	-0.0
1,203,669	+		Synpcc7942_1169	0.89	-0.7
1,203,669	+		Synpcc7942_1169	0.89	-0.8
1,203,669	+		Synpcc7942_1169	0.89	-1.0
1,203,669	+		Synpcc7942_1169	0.89	-1.5
1,203,677	-		Synpcc7942_1169	0.89	-0.9
1,203,677	-		Synpcc7942_1169	0.89	-0.9
1,203,703	+				-0.7
1,204,314	+				-0.0
1,204,316	+				-1.1
1,204,316	+				-1.3
1,204,361	-				-0.3
1,204,373	-				+0.6
1,204,414	+				-0.6
1,204,414	+				-1.8
1,204,418	-				+1.0
1,204,422	-				+0.5
1,204,437	-				+1.0
1,204,452	+				-1.0
1,204,487	+				-0.6
1,204,487	-				-0.0
1,204,503	-				+0.5
1,204,522	+				-1.3
1,204,530	-				+1.0
1,204,594	-				-0.4
1,204,624	-				+1.0
1,204,690	-				+0.2
1,204,702	-				-1.6
1,204,705	-				+1.0
1,204,737	+				-3.0
1,204,742	+				+2.0
1,204,796	-		Synpcc7942_1171	0.13	-1.3