Strain Fitness in Synechococcus elongatus PCC 7942 around Synpcc7942_1006

Experiment: Biofilm in Fresh BG11R in Flasks with Spin rep 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Biofilm in Fresh BG11R in Flasks with Spin rep 1
1,016,091	-		Synpcc7942_1004	0.36	+0.4
1,016,147	+		Synpcc7942_1004	0.52	-1.0
1,016,151	+		Synpcc7942_1004	0.53	-1.2
1,016,151	+		Synpcc7942_1004	0.53	+1.0
1,016,159	-		Synpcc7942_1004	0.55	-1.4
1,016,159	-		Synpcc7942_1004	0.55	-2.1
1,016,190	-		Synpcc7942_1004	0.64	-1.4
1,016,190	-		Synpcc7942_1004	0.64	-1.3
1,016,200	-		Synpcc7942_1004	0.67	-2.2
1,016,219	+		Synpcc7942_1004	0.72	-0.8
1,016,225	+		Synpcc7942_1004	0.74	+5.4
1,016,233	-		Synpcc7942_1004	0.76	-0.2
1,016,233	-		Synpcc7942_1004	0.76	+1.0
1,016,242	+		Synpcc7942_1004	0.79	-2.3
1,016,265	+		Synpcc7942_1004	0.85	+3.8
1,016,265	+		Synpcc7942_1004	0.85	+0.6
1,016,265	+		Synpcc7942_1004	0.85	+1.6
1,016,273	-		Synpcc7942_1004	0.88	-1.8
1,016,273	-		Synpcc7942_1004	0.88	+1.0
1,016,273	-		Synpcc7942_1004	0.88	-0.4
1,016,283	-				-2.8
1,016,301	+				+1.0
1,016,309	+				+1.1
1,016,408	-		Synpcc7942_1005	0.15	+0.2
1,016,421	-		Synpcc7942_1005	0.17	-0.6
1,016,459	+		Synpcc7942_1005	0.23	+1.0
1,016,488	+		Synpcc7942_1005	0.27	+1.6
1,016,532	+		Synpcc7942_1005	0.34	-2.3
1,016,532	+		Synpcc7942_1005	0.34	+1.0
1,016,537	+		Synpcc7942_1005	0.35	-0.3
1,016,586	-		Synpcc7942_1005	0.43	+0.7
1,016,586	-		Synpcc7942_1005	0.43	-0.6
1,016,628	-		Synpcc7942_1005	0.50	-2.3
1,016,679	+		Synpcc7942_1005	0.58	+0.2
1,016,722	-		Synpcc7942_1005	0.65	-1.0
1,016,746	+		Synpcc7942_1005	0.68	-0.0
1,016,746	+		Synpcc7942_1005	0.68	-0.9
1,016,754	-				-1.1
1,016,763	+		Synpcc7942_1005	0.71	-3.3
1,016,802	-		Synpcc7942_1005	0.77	+1.0
1,016,812	-		Synpcc7942_1005	0.79	-0.3
1,016,874	+		Synpcc7942_1005	0.89	-1.2
1,016,876	+		Synpcc7942_1005	0.89	-1.2
1,016,882	-				-0.8
1,016,882	-				-0.1
1,016,884	+				-1.0
1,016,901	-				-1.6
1,016,907	-				-2.3
1,016,908	-				-0.8
1,016,908	-				-0.6
1,016,910	+				-0.3
1,016,918	-				-1.1
1,016,933	+				+2.2
1,016,941	-				+1.0
1,016,943	+				+1.0
1,016,965	+				+1.7
1,016,965	+				-1.3
1,016,965	+				-2.2
1,016,965	+				-0.2
1,016,965	+				+1.0
1,016,965	+				-0.2
1,016,973	-				-1.3
1,017,012	+				-0.8
1,017,012	+				-0.0
1,017,012	+				+1.1
1,017,020	+				+0.2
1,017,028	-				+1.2
1,017,055	+				-2.2
1,017,081	+				-0.0
1,017,086	+				-1.9
1,017,086	+				-1.6
1,017,086	+				+0.4
1,017,086	+				-0.6
1,017,086	+				+1.0
1,017,086	+				-1.0
1,017,091	+				+0.6
1,017,094	-				-1.8
1,017,094	-				-0.0
1,017,094	-				+0.5
1,017,099	-				-1.8
1,017,120	-				+1.0
1,017,136	-				-0.3
1,017,142	+				+1.0
1,017,142	+				-1.8
1,017,142	+				-1.9
1,017,147	+				-0.0
1,017,152	+		Synpcc7942_1006	0.10	+0.6
1,017,160	-		Synpcc7942_1006	0.11	-0.4
1,017,178	+		Synpcc7942_1006	0.12	+0.6
1,017,204	+		Synpcc7942_1006	0.15	+1.0
1,017,204	+		Synpcc7942_1006	0.15	-0.0
1,017,204	+		Synpcc7942_1006	0.15	-1.0
1,017,207	-		Synpcc7942_1006	0.15	-3.5
1,017,207	-		Synpcc7942_1006	0.15	+2.8
1,017,207	-		Synpcc7942_1006	0.15	-2.9
1,017,207	-		Synpcc7942_1006	0.15	-1.1
1,017,211	+		Synpcc7942_1006	0.15	-2.2
1,017,212	+		Synpcc7942_1006	0.16	-3.3
1,017,212	-		Synpcc7942_1006	0.16	-1.8
1,017,213	+		Synpcc7942_1006	0.16	-0.6
1,017,213	+		Synpcc7942_1006	0.16	-1.6
1,017,213	+		Synpcc7942_1006	0.16	-0.0
1,017,213	+		Synpcc7942_1006	0.16	-0.0
1,017,221	-		Synpcc7942_1006	0.16	-1.8
1,017,256	-		Synpcc7942_1006	0.20	+1.0
1,017,257	-		Synpcc7942_1006	0.20	+1.0
1,017,260	+		Synpcc7942_1006	0.20	-1.0
1,017,286	-		Synpcc7942_1006	0.22	-0.6
1,017,291	-		Synpcc7942_1006	0.23	+0.2
1,017,365	-		Synpcc7942_1006	0.30	-1.9
1,017,380	+		Synpcc7942_1006	0.31	+0.6
1,017,380	+		Synpcc7942_1006	0.31	-2.9
1,017,380	+		Synpcc7942_1006	0.31	+0.8
1,017,380	+		Synpcc7942_1006	0.31	-1.6
1,017,385	+		Synpcc7942_1006	0.32	+0.2
1,017,388	-		Synpcc7942_1006	0.32	-0.0
1,017,388	-		Synpcc7942_1006	0.32	-2.1
1,017,406	+		Synpcc7942_1006	0.34	-1.6
1,017,421	+		Synpcc7942_1006	0.35	-2.0
1,017,426	+		Synpcc7942_1006	0.35	-0.2
1,017,528	-		Synpcc7942_1006	0.45	-2.3
1,017,551	+		Synpcc7942_1006	0.47	-1.3
1,017,610	+		Synpcc7942_1006	0.52	-1.3
1,017,665	+		Synpcc7942_1006	0.57	-1.2
1,017,673	-		Synpcc7942_1006	0.58	+1.0
1,017,706	+		Synpcc7942_1006	0.61	-1.0
1,017,744	+		Synpcc7942_1006	0.65	+0.7
1,017,778	+		Synpcc7942_1006	0.68	+1.0
1,018,052	+				+0.6
1,018,145	+				+0.5
1,018,325	+				+1.0
1,018,510	+				+1.6
1,018,510	+				+2.0
1,018,518	-				-2.1
1,018,518	-				-1.1
1,018,608	-				-1.3