Strain Fitness in Synechococcus elongatus PCC 7942 around Synpcc7942_0999

Experiment: Biofilm in Fresh BG11R in Flasks with Spin rep 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Biofilm in Fresh BG11R in Flasks with Spin rep 1
1,007,522	+				+2.6
1,007,566	-				-1.3
1,007,566	-				+1.0
1,007,579	+				-1.7
1,007,611	+		Synpcc7942_0999	0.10	-1.5
1,007,611	+		Synpcc7942_0999	0.10	-0.7
1,007,611	+				-2.5
1,007,614	-		Synpcc7942_0999	0.11	+1.0
1,007,617	+		Synpcc7942_0999	0.12	-0.3
1,007,619	-		Synpcc7942_0999	0.13	-3.2
1,007,633	-		Synpcc7942_0999	0.17	-1.8
1,007,652	+		Synpcc7942_0999	0.24	-1.4
1,007,660	-		Synpcc7942_0999	0.26	-0.6
1,007,742	-		Synpcc7942_0999	0.54	-0.9
1,007,786	-		Synpcc7942_0999	0.68	+3.0
1,007,823	+		Synpcc7942_0999	0.81	-1.9
1,007,857	+				+3.2
1,007,904	+				-0.4
1,007,906	+				+2.9
1,007,928	+				-0.0
1,007,936	-				-1.4
1,008,020	+				+1.0
1,008,021	-				-0.0
1,008,031	-				-0.2
1,008,108	+				-0.9
1,008,127	+				+1.0
1,008,127	+				-0.5
1,008,135	-				-0.7
1,008,135	-				-1.0
1,008,135	-				-0.6
1,008,136	-				-1.2
1,008,176	-				-1.2
1,008,224	+				+2.0
1,008,351	+				-1.3
1,008,351	+				-1.9
1,008,354	-				-0.0
1,008,359	-				-2.5
1,008,359	-				-1.7
1,008,364	-				-1.2
1,008,381	+				-2.6
1,008,383	+				-2.0
1,008,397	+				-0.3
1,008,407	+				-2.3
1,008,420	-				-0.7
1,008,443	+				-3.4
1,008,443	+				-2.9
1,008,462	-		Synpcc7942_1000	0.10	-0.6
1,008,469	+		Synpcc7942_1000	0.10	-1.7
1,008,475	+		Synpcc7942_1000	0.10	-2.0
1,008,512	-		Synpcc7942_1000	0.12	+1.6
1,008,514	-		Synpcc7942_1000	0.12	+2.0
1,008,529	-		Synpcc7942_1000	0.12	+2.6
1,008,541	-		Synpcc7942_1000	0.12	-1.0
1,008,548	-		Synpcc7942_1000	0.13	+1.3
1,008,551	-		Synpcc7942_1000	0.13	+1.0
1,008,556	-		Synpcc7942_1000	0.13	+1.9
1,008,583	+		Synpcc7942_1000	0.14	-1.3
1,008,591	-		Synpcc7942_1000	0.14	-1.1
1,008,673	+		Synpcc7942_1000	0.17	-0.0
1,008,729	+		Synpcc7942_1000	0.18	-2.4
1,008,755	-		Synpcc7942_1000	0.19	+1.0
1,008,757	-		Synpcc7942_1000	0.19	+2.8
1,008,794	-		Synpcc7942_1000	0.20	-1.4
1,008,795	+		Synpcc7942_1000	0.20	+1.0
1,008,805	+		Synpcc7942_1000	0.21	-2.4
1,008,854	+		Synpcc7942_1000	0.22	+0.6
1,008,854	+		Synpcc7942_1000	0.22	+0.1
1,008,859	+		Synpcc7942_1000	0.22	-1.3
1,008,859	+		Synpcc7942_1000	0.22	+1.0
1,008,859	+		Synpcc7942_1000	0.22	-0.7
1,008,862	-		Synpcc7942_1000	0.22	+1.0
1,008,867	-		Synpcc7942_1000	0.23	+1.2
1,008,867	-		Synpcc7942_1000	0.23	+2.0
1,008,867	-		Synpcc7942_1000	0.23	-1.9
1,008,867	-		Synpcc7942_1000	0.23	-0.8
1,008,867	-		Synpcc7942_1000	0.23	+0.4
1,008,869	+		Synpcc7942_1000	0.23	-1.2
1,008,869	+		Synpcc7942_1000	0.23	+1.0
1,008,869	+		Synpcc7942_1000	0.23	-0.0
1,008,869	+		Synpcc7942_1000	0.23	+1.6
1,008,869	+		Synpcc7942_1000	0.23	+1.6
1,008,869	+		Synpcc7942_1000	0.23	-0.0
1,008,869	+		Synpcc7942_1000	0.23	-0.7
1,008,869	+		Synpcc7942_1000	0.23	+1.6
1,008,869	+		Synpcc7942_1000	0.23	-1.6
1,008,869	+		Synpcc7942_1000	0.23	-0.0
1,008,869	+		Synpcc7942_1000	0.23	-0.8
1,008,869	+		Synpcc7942_1000	0.23	-0.0
1,008,869	+		Synpcc7942_1000	0.23	+1.0
1,008,869	+		Synpcc7942_1000	0.23	-0.6
1,008,869	+		Synpcc7942_1000	0.23	-1.2
1,008,869	+		Synpcc7942_1000	0.23	-0.3
1,008,877	-		Synpcc7942_1000	0.23	-0.0
1,008,877	-		Synpcc7942_1000	0.23	-0.5
1,008,877	-		Synpcc7942_1000	0.23	-3.8
1,008,877	-		Synpcc7942_1000	0.23	-0.3
1,008,877	-		Synpcc7942_1000	0.23	+0.6
1,008,877	-		Synpcc7942_1000	0.23	-3.3
1,008,877	-		Synpcc7942_1000	0.23	-0.2
1,008,877	-		Synpcc7942_1000	0.23	+0.6
1,008,877	-		Synpcc7942_1000	0.23	+2.3
1,008,877	-		Synpcc7942_1000	0.23	-1.6
1,008,877	-		Synpcc7942_1000	0.23	-2.9
1,008,877	-		Synpcc7942_1000	0.23	-0.6