Strain Fitness in Synechococcus elongatus PCC 7942 around Synpcc7942_0032
Experiment: Biofilm in Fresh BG11R in Flasks with Spin rep 1
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | Biofilm in Fresh BG11R in Flasks with Spin rep 1 |
---|---|---|---|---|---|
remove | |||||
32,840 | - | +0.7 | |||
32,855 | - | +1.5 | |||
32,855 | - | -1.5 | |||
32,894 | - | Synpcc7942_0032 | 0.13 | +0.9 | |
32,919 | + | Synpcc7942_0032 | 0.20 | +1.9 | |
32,927 | - | Synpcc7942_0032 | 0.22 | -0.1 | |
33,047 | - | Synpcc7942_0032 | 0.56 | -0.7 | |
33,097 | + | Synpcc7942_0032 | 0.70 | -1.7 | |
33,097 | + | Synpcc7942_0032 | 0.70 | -3.0 | |
33,236 | + | Synpcc7942_0033 | 0.19 | -0.1 | |
33,254 | - | Synpcc7942_0033 | 0.24 | -0.1 | |
33,526 | + | -0.7 | |||
33,551 | + | -0.9 | |||
33,561 | + | -0.1 | |||
33,562 | + | -0.8 | |||
33,562 | + | +3.5 | |||
33,567 | + | -0.7 | |||
33,590 | - | +1.9 | |||
33,613 | + | -1.2 | |||
33,677 | + | -0.1 | |||
33,677 | + | -0.8 | |||
33,682 | + | -0.2 | |||
33,685 | - | -0.7 | |||
33,685 | - | -0.3 | |||
33,685 | - | -1.7 | |||
33,685 | - | +0.1 | |||
33,685 | - | -3.6 | |||
33,685 | - | +0.9 | |||
33,685 | - | +1.9 | |||
33,685 | - | -0.3 | |||
33,734 | + | Synpcc7942_0034 | 0.43 | -0.6 | |
33,742 | - | Synpcc7942_0034 | 0.50 | +1.8 | |
33,904 | - | +0.9 | |||
34,092 | + | +1.3 |
Or see this region's nucleotide sequence