Experiment: MoLS4 with L-Arginine as nutrient 10mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DVU3068 and DVU3069 are separated by 417 nucleotides DVU3069 and DVU3070 overlap by 4 nucleotides DVU3070 and DVU3071 are separated by 81 nucleotides
DVU3068: DVU3068 - GAF domain/sensory box/EAL domain protein (TIGR), at 3,205,678 to 3,208,161
DVU3068
DVU3069: DVU3069 - conserved hypothetical protein TIGR00247 (TIGR), at 3,208,579 to 3,209,901
DVU3069
DVU3070: DVU3070 - conserved hypothetical protein (TIGR), at 3,209,898 to 3,210,326
DVU3070
DVU3071: DVU3071 - oxidoreductase, FAD/iron-sulfur cluster-binding domain protein (TIGR), at 3,210,408 to 3,213,971
DVU3071
Position (kb)
3208
3209
3210 Strain fitness (log2 ratio)
-2
-1
0
1 at 3207.604 kb on + strand, within DVU3068 at 3207.642 kb on - strand, within DVU3068 at 3207.763 kb on - strand, within DVU3068 at 3207.770 kb on - strand, within DVU3068 at 3207.839 kb on - strand, within DVU3068 at 3207.841 kb on - strand, within DVU3068 at 3207.841 kb on - strand, within DVU3068 at 3207.852 kb on + strand, within DVU3068 at 3207.914 kb on + strand at 3207.955 kb on - strand at 3207.955 kb on - strand at 3207.963 kb on - strand at 3207.989 kb on + strand at 3208.031 kb on + strand at 3208.091 kb on + strand at 3208.281 kb on - strand at 3208.292 kb on - strand at 3208.296 kb on + strand at 3208.327 kb on + strand at 3208.333 kb on + strand at 3208.365 kb on + strand at 3208.387 kb on - strand at 3208.409 kb on + strand at 3208.411 kb on - strand at 3208.527 kb on - strand at 3208.618 kb on - strand at 3208.646 kb on + strand at 3208.667 kb on + strand at 3208.686 kb on - strand at 3208.732 kb on + strand, within DVU3069 at 3208.777 kb on - strand, within DVU3069 at 3208.844 kb on + strand, within DVU3069 at 3208.897 kb on - strand, within DVU3069 at 3208.930 kb on + strand, within DVU3069 at 3208.978 kb on + strand, within DVU3069 at 3208.996 kb on - strand, within DVU3069 at 3209.088 kb on - strand, within DVU3069 at 3209.090 kb on + strand, within DVU3069 at 3209.100 kb on + strand, within DVU3069 at 3209.115 kb on + strand, within DVU3069 at 3209.130 kb on - strand, within DVU3069 at 3209.130 kb on - strand, within DVU3069 at 3209.135 kb on - strand, within DVU3069 at 3209.135 kb on - strand, within DVU3069 at 3209.142 kb on + strand, within DVU3069 at 3209.164 kb on + strand, within DVU3069 at 3209.203 kb on + strand, within DVU3069 at 3209.276 kb on + strand, within DVU3069 at 3209.309 kb on - strand, within DVU3069 at 3209.309 kb on - strand, within DVU3069 at 3209.314 kb on + strand, within DVU3069 at 3209.370 kb on + strand, within DVU3069 at 3209.373 kb on - strand, within DVU3069 at 3209.435 kb on - strand, within DVU3069 at 3209.480 kb on + strand, within DVU3069 at 3209.569 kb on - strand, within DVU3069 at 3209.617 kb on + strand, within DVU3069 at 3209.667 kb on + strand, within DVU3069 at 3209.794 kb on + strand at 3209.841 kb on - strand at 3209.900 kb on + strand at 3210.363 kb on + strand at 3210.365 kb on + strand at 3210.370 kb on + strand at 3210.392 kb on - strand at 3210.399 kb on + strand at 3210.408 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction MoLS4 with L-Arginine as nutrient 10mM remove 3,207,604 + DVU3068 0.78 +0.4 3,207,642 - DVU3068 0.79 -0.2 3,207,763 - DVU3068 0.84 -1.1 3,207,770 - DVU3068 0.84 -0.1 3,207,839 - DVU3068 0.87 +0.1 3,207,841 - DVU3068 0.87 +0.8 3,207,841 - DVU3068 0.87 -0.0 3,207,852 + DVU3068 0.88 +0.1 3,207,914 + +0.2 3,207,955 - -0.8 3,207,955 - -0.1 3,207,963 - -0.4 3,207,989 + -0.2 3,208,031 + -0.9 3,208,091 + +0.1 3,208,281 - +0.1 3,208,292 - -0.1 3,208,296 + +0.1 3,208,327 + +0.4 3,208,333 + +0.1 3,208,365 + -0.5 3,208,387 - -1.0 3,208,409 + -0.1 3,208,411 - -1.3 3,208,527 - +0.6 3,208,618 - +0.6 3,208,646 + +1.2 3,208,667 + +0.1 3,208,686 - +0.2 3,208,732 + DVU3069 0.12 +0.0 3,208,777 - DVU3069 0.15 +0.1 3,208,844 + DVU3069 0.20 +0.2 3,208,897 - DVU3069 0.24 +0.5 3,208,930 + DVU3069 0.27 -0.6 3,208,978 + DVU3069 0.30 +0.3 3,208,996 - DVU3069 0.32 -0.8 3,209,088 - DVU3069 0.38 +0.4 3,209,090 + DVU3069 0.39 +0.8 3,209,100 + DVU3069 0.39 +0.1 3,209,115 + DVU3069 0.41 +0.2 3,209,130 - DVU3069 0.42 -0.1 3,209,130 - DVU3069 0.42 -0.8 3,209,135 - DVU3069 0.42 +0.3 3,209,135 - DVU3069 0.42 +0.4 3,209,142 + DVU3069 0.43 +0.1 3,209,164 + DVU3069 0.44 +0.6 3,209,203 + DVU3069 0.47 +0.5 3,209,276 + DVU3069 0.53 +0.4 3,209,309 - DVU3069 0.55 -0.3 3,209,309 - DVU3069 0.55 +0.5 3,209,314 + DVU3069 0.56 -1.2 3,209,370 + DVU3069 0.60 -0.8 3,209,373 - DVU3069 0.60 -0.4 3,209,435 - DVU3069 0.65 +0.6 3,209,480 + DVU3069 0.68 -0.3 3,209,569 - DVU3069 0.75 +0.4 3,209,617 + DVU3069 0.78 -0.8 3,209,667 + DVU3069 0.82 +0.2 3,209,794 + +0.1 3,209,841 - +0.1 3,209,900 + +0.1 3,210,363 + +0.0 3,210,365 + -1.6 3,210,370 + +1.0 3,210,392 - -2.0 3,210,399 + +0.9 3,210,408 - -0.5
Or see this region's nucleotide sequence