Experiment: Carbon source D-Glucose 10 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dshi_2031 and Dshi_2032 are separated by 117 nucleotides Dshi_2032 and Dshi_2033 are separated by 12 nucleotides
Dshi_2031: Dshi_2031 - TRAP dicarboxylate transporter- DctP subunit (RefSeq), at 2,150,586 to 2,151,734
_2031
Dshi_2032: Dshi_2032 - Tripartite ATP-independent periplasmic transporter DctQ component (RefSeq), at 2,151,852 to 2,152,367
_2032
Dshi_2033: Dshi_2033 - TRAP dicarboxylate transporter, DctM subunit (RefSeq), at 2,152,380 to 2,153,708
_2033
Position (kb)
2151
2152
2153 Strain fitness (log2 ratio)
-2
-1
0
1 at 2150.910 kb on + strand, within Dshi_2031 at 2150.925 kb on + strand, within Dshi_2031 at 2150.925 kb on + strand, within Dshi_2031 at 2150.989 kb on + strand, within Dshi_2031 at 2151.069 kb on + strand, within Dshi_2031 at 2151.151 kb on + strand, within Dshi_2031 at 2151.253 kb on + strand, within Dshi_2031 at 2151.313 kb on - strand, within Dshi_2031 at 2151.432 kb on - strand, within Dshi_2031 at 2151.442 kb on - strand, within Dshi_2031 at 2151.446 kb on + strand, within Dshi_2031 at 2151.538 kb on + strand, within Dshi_2031 at 2151.538 kb on + strand, within Dshi_2031 at 2151.538 kb on + strand, within Dshi_2031 at 2151.538 kb on + strand, within Dshi_2031 at 2151.582 kb on - strand, within Dshi_2031 at 2151.649 kb on - strand at 2151.666 kb on + strand at 2151.787 kb on - strand at 2151.807 kb on - strand at 2151.807 kb on - strand at 2151.807 kb on - strand at 2151.810 kb on + strand at 2151.838 kb on - strand at 2151.998 kb on - strand, within Dshi_2032 at 2152.010 kb on + strand, within Dshi_2032 at 2152.136 kb on - strand, within Dshi_2032 at 2152.182 kb on + strand, within Dshi_2032 at 2152.208 kb on + strand, within Dshi_2032 at 2152.272 kb on + strand, within Dshi_2032 at 2152.366 kb on - strand at 2152.382 kb on + strand at 2152.532 kb on + strand, within Dshi_2033 at 2152.533 kb on + strand, within Dshi_2033 at 2152.533 kb on + strand, within Dshi_2033 at 2152.541 kb on - strand, within Dshi_2033 at 2152.710 kb on + strand, within Dshi_2033 at 2152.767 kb on + strand, within Dshi_2033 at 2152.861 kb on + strand, within Dshi_2033 at 2152.923 kb on + strand, within Dshi_2033 at 2152.931 kb on - strand, within Dshi_2033 at 2153.054 kb on + strand, within Dshi_2033 at 2153.071 kb on + strand, within Dshi_2033 at 2153.072 kb on - strand, within Dshi_2033 at 2153.208 kb on - strand, within Dshi_2033 at 2153.208 kb on - strand, within Dshi_2033 at 2153.246 kb on + strand, within Dshi_2033 at 2153.254 kb on - strand, within Dshi_2033
Per-strain Table
Position Strand Gene LocusTag Fraction Carbon source D-Glucose 10 mM remove 2,150,910 + Dshi_2031 0.28 -0.4 2,150,925 + Dshi_2031 0.30 -0.5 2,150,925 + Dshi_2031 0.30 -0.1 2,150,989 + Dshi_2031 0.35 -1.8 2,151,069 + Dshi_2031 0.42 -0.5 2,151,151 + Dshi_2031 0.49 +0.3 2,151,253 + Dshi_2031 0.58 +0.3 2,151,313 - Dshi_2031 0.63 -0.2 2,151,432 - Dshi_2031 0.74 -0.4 2,151,442 - Dshi_2031 0.74 +0.9 2,151,446 + Dshi_2031 0.75 +0.5 2,151,538 + Dshi_2031 0.83 -2.1 2,151,538 + Dshi_2031 0.83 -1.5 2,151,538 + Dshi_2031 0.83 -0.3 2,151,538 + Dshi_2031 0.83 -1.5 2,151,582 - Dshi_2031 0.87 -1.2 2,151,649 - -0.3 2,151,666 + -0.3 2,151,787 - -1.6 2,151,807 - -0.1 2,151,807 - +0.1 2,151,807 - -0.1 2,151,810 + +0.0 2,151,838 - +0.2 2,151,998 - Dshi_2032 0.28 +0.4 2,152,010 + Dshi_2032 0.31 -0.1 2,152,136 - Dshi_2032 0.55 -1.7 2,152,182 + Dshi_2032 0.64 -0.3 2,152,208 + Dshi_2032 0.69 -0.8 2,152,272 + Dshi_2032 0.81 -0.5 2,152,366 - -0.1 2,152,382 + +0.7 2,152,532 + Dshi_2033 0.11 -0.2 2,152,533 + Dshi_2033 0.12 -0.7 2,152,533 + Dshi_2033 0.12 -0.0 2,152,541 - Dshi_2033 0.12 +0.6 2,152,710 + Dshi_2033 0.25 -0.1 2,152,767 + Dshi_2033 0.29 -1.3 2,152,861 + Dshi_2033 0.36 +1.5 2,152,923 + Dshi_2033 0.41 +0.3 2,152,931 - Dshi_2033 0.41 -0.0 2,153,054 + Dshi_2033 0.51 +0.7 2,153,071 + Dshi_2033 0.52 -0.8 2,153,072 - Dshi_2033 0.52 -2.1 2,153,208 - Dshi_2033 0.62 -0.3 2,153,208 - Dshi_2033 0.62 +0.4 2,153,246 + Dshi_2033 0.65 -1.4 2,153,254 - Dshi_2033 0.66 -1.9
Or see this region's nucleotide sequence