Experiment: MoLS4 with L-Arginine as nutrient 10mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DVU0292 and DVU0293 are separated by 385 nucleotides DVU0293 and DVU0294 are separated by 388 nucleotides
DVU0292: DVU0292 - hypothetical protein (TIGR), at 336,275 to 337,381
DVU0292
DVU0293: DVU0293 - prokaryotic dksA/traR C4-type zinc finger family protein (TIGR), at 337,767 to 338,108
DVU0293
DVU0294: DVU0294 - glycosyl transferase, group 2 family protein (TIGR), at 338,497 to 340,326
DVU0294
Position (kb) 337
338
339 Strain fitness (log2 ratio) -3
-2
-1
0
1 at 336.822 kb on + strand, within DVU0292 at 336.822 kb on + strand, within DVU0292 at 336.822 kb on + strand, within DVU0292 at 336.830 kb on - strand, within DVU0292 at 336.844 kb on - strand, within DVU0292 at 336.861 kb on - strand, within DVU0292 at 336.873 kb on - strand, within DVU0292 at 336.900 kb on + strand, within DVU0292 at 336.908 kb on - strand, within DVU0292 at 336.968 kb on + strand, within DVU0292 at 337.025 kb on + strand, within DVU0292 at 337.025 kb on + strand, within DVU0292 at 337.028 kb on - strand, within DVU0292 at 337.152 kb on - strand, within DVU0292 at 337.208 kb on + strand, within DVU0292 at 337.237 kb on + strand, within DVU0292 at 337.317 kb on + strand at 337.355 kb on + strand at 337.421 kb on + strand at 337.421 kb on + strand at 337.423 kb on + strand at 337.423 kb on + strand at 337.423 kb on + strand at 337.423 kb on + strand at 337.431 kb on - strand at 337.431 kb on - strand at 337.431 kb on - strand at 337.517 kb on + strand at 337.524 kb on + strand at 337.525 kb on - strand at 337.771 kb on + strand at 337.784 kb on - strand at 337.796 kb on + strand at 337.885 kb on + strand, within DVU0293 at 337.949 kb on - strand, within DVU0293 at 338.026 kb on + strand, within DVU0293 at 338.071 kb on + strand, within DVU0293 at 338.186 kb on + strand at 338.194 kb on - strand at 338.276 kb on + strand at 338.420 kb on - strand at 338.461 kb on + strand at 338.474 kb on - strand at 338.474 kb on - strand at 338.474 kb on - strand at 338.476 kb on - strand at 338.491 kb on + strand at 338.499 kb on - strand at 338.509 kb on - strand at 338.530 kb on - strand at 338.536 kb on - strand at 338.557 kb on + strand at 338.565 kb on - strand at 338.565 kb on - strand at 338.565 kb on - strand at 338.565 kb on - strand at 338.566 kb on + strand at 338.614 kb on - strand at 338.664 kb on + strand at 338.668 kb on + strand at 338.677 kb on - strand at 338.823 kb on + strand, within DVU0294 at 338.877 kb on - strand, within DVU0294 at 338.976 kb on + strand, within DVU0294 at 338.992 kb on - strand, within DVU0294 at 339.055 kb on - strand, within DVU0294 at 339.055 kb on - strand, within DVU0294 at 339.079 kb on + strand, within DVU0294
Per-strain Table
Position Strand Gene LocusTag Fraction MoLS4 with L-Arginine as nutrient 10mM remove 336,822 + DVU0292 0.49 -0.1 336,822 + DVU0292 0.49 -1.7 336,822 + DVU0292 0.49 -1.0 336,830 - DVU0292 0.50 -1.5 336,844 - DVU0292 0.51 +0.1 336,861 - DVU0292 0.53 +0.4 336,873 - DVU0292 0.54 +0.0 336,900 + DVU0292 0.56 -1.1 336,908 - DVU0292 0.57 +0.7 336,968 + DVU0292 0.63 -0.9 337,025 + DVU0292 0.68 -0.1 337,025 + DVU0292 0.68 -0.5 337,028 - DVU0292 0.68 +0.4 337,152 - DVU0292 0.79 -1.4 337,208 + DVU0292 0.84 -0.5 337,237 + DVU0292 0.87 +0.3 337,317 + -0.3 337,355 + +0.2 337,421 + -0.1 337,421 + -0.0 337,423 + -1.6 337,423 + -0.5 337,423 + +0.2 337,423 + -0.1 337,431 - -0.2 337,431 - -0.8 337,431 - -1.1 337,517 + +0.5 337,524 + -0.8 337,525 - -3.3 337,771 + +0.1 337,784 - -1.0 337,796 + +0.8 337,885 + DVU0293 0.35 -0.3 337,949 - DVU0293 0.53 +0.0 338,026 + DVU0293 0.76 +0.3 338,071 + DVU0293 0.89 +0.7 338,186 + +1.5 338,194 - -0.0 338,276 + -1.9 338,420 - -0.2 338,461 + -0.1 338,474 - +0.1 338,474 - -0.2 338,474 - -1.0 338,476 - -1.7 338,491 + -0.2 338,499 - +0.5 338,509 - -1.6 338,530 - -0.0 338,536 - -2.0 338,557 + +0.3 338,565 - -0.7 338,565 - -0.5 338,565 - -0.0 338,565 - -1.0 338,566 + -0.5 338,614 - +0.9 338,664 + -0.1 338,668 + -0.0 338,677 - -0.1 338,823 + DVU0294 0.18 +0.2 338,877 - DVU0294 0.21 +0.7 338,976 + DVU0294 0.26 -0.9 338,992 - DVU0294 0.27 -0.1 339,055 - DVU0294 0.30 -0.1 339,055 - DVU0294 0.30 -0.4 339,079 + DVU0294 0.32 -0.0
Or see this region's nucleotide sequence