Experiment: MoLS4 with L-Arginine as nutrient 10mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DVU2736 and DVU2737 are separated by 333 nucleotides DVU2737 and DVU2738 are separated by 237 nucleotides
DVU2736: DVU2736 - hypothetical protein (TIGR), at 2,837,699 to 2,838,208
DVU2736
DVU2737: DVU2737 - RNA methyltransferase, TrmH family (TIGR), at 2,838,542 to 2,839,306
DVU2737
DVU2738: DVU2738 - methyl-accepting chemotaxis protein (TIGR), at 2,839,544 to 2,841,949
DVU2738
Position (kb)
2838
2839
2840 Strain fitness (log2 ratio)
-2
-1
0
1 at 2837.557 kb on + strand at 2837.577 kb on + strand at 2837.585 kb on - strand at 2837.585 kb on - strand at 2837.601 kb on - strand at 2837.623 kb on + strand at 2837.751 kb on + strand, within DVU2736 at 2837.751 kb on + strand, within DVU2736 at 2837.753 kb on - strand, within DVU2736 at 2837.939 kb on - strand, within DVU2736 at 2837.970 kb on - strand, within DVU2736 at 2838.030 kb on - strand, within DVU2736 at 2838.071 kb on + strand, within DVU2736 at 2838.101 kb on - strand, within DVU2736 at 2838.225 kb on + strand at 2838.352 kb on - strand at 2838.362 kb on + strand at 2838.363 kb on + strand at 2838.391 kb on + strand at 2838.501 kb on + strand at 2838.512 kb on + strand at 2838.515 kb on - strand at 2838.560 kb on - strand at 2838.605 kb on + strand at 2838.636 kb on + strand, within DVU2737 at 2838.651 kb on + strand, within DVU2737 at 2838.720 kb on + strand, within DVU2737 at 2838.720 kb on + strand, within DVU2737 at 2838.720 kb on + strand, within DVU2737 at 2838.729 kb on - strand, within DVU2737 at 2838.775 kb on + strand, within DVU2737 at 2838.910 kb on - strand, within DVU2737 at 2838.978 kb on + strand, within DVU2737 at 2838.981 kb on - strand, within DVU2737 at 2839.124 kb on - strand, within DVU2737 at 2839.239 kb on + strand at 2839.279 kb on + strand at 2839.308 kb on - strand at 2839.412 kb on - strand at 2839.459 kb on + strand at 2839.459 kb on + strand at 2839.459 kb on + strand at 2839.467 kb on - strand at 2839.505 kb on + strand at 2839.513 kb on - strand at 2839.514 kb on - strand at 2839.601 kb on - strand at 2839.626 kb on - strand at 2839.640 kb on + strand at 2839.648 kb on - strand at 2839.702 kb on + strand at 2839.702 kb on + strand at 2839.715 kb on + strand at 2839.777 kb on - strand at 2839.813 kb on + strand, within DVU2738 at 2839.821 kb on - strand, within DVU2738 at 2839.873 kb on + strand, within DVU2738 at 2839.873 kb on + strand, within DVU2738 at 2839.995 kb on - strand, within DVU2738 at 2840.109 kb on - strand, within DVU2738 at 2840.116 kb on + strand, within DVU2738 at 2840.124 kb on - strand, within DVU2738 at 2840.289 kb on + strand, within DVU2738
Per-strain Table
Position Strand Gene LocusTag Fraction MoLS4 with L-Arginine as nutrient 10mM remove 2,837,557 + +1.6 2,837,577 + +0.1 2,837,585 - -1.1 2,837,585 - +0.0 2,837,601 - +0.3 2,837,623 + +0.1 2,837,751 + DVU2736 0.10 -1.2 2,837,751 + DVU2736 0.10 -1.9 2,837,753 - DVU2736 0.11 -0.4 2,837,939 - DVU2736 0.47 +0.1 2,837,970 - DVU2736 0.53 -2.1 2,838,030 - DVU2736 0.65 +0.1 2,838,071 + DVU2736 0.73 +0.3 2,838,101 - DVU2736 0.79 +0.1 2,838,225 + -0.2 2,838,352 - +0.3 2,838,362 + +0.9 2,838,363 + +1.5 2,838,391 + -1.1 2,838,501 + +1.0 2,838,512 + +0.5 2,838,515 - +1.5 2,838,560 - -0.5 2,838,605 + -0.8 2,838,636 + DVU2737 0.12 +0.9 2,838,651 + DVU2737 0.14 -0.0 2,838,720 + DVU2737 0.23 -0.4 2,838,720 + DVU2737 0.23 +0.0 2,838,720 + DVU2737 0.23 -0.4 2,838,729 - DVU2737 0.24 -0.3 2,838,775 + DVU2737 0.30 +0.2 2,838,910 - DVU2737 0.48 -0.3 2,838,978 + DVU2737 0.57 +1.1 2,838,981 - DVU2737 0.57 -0.1 2,839,124 - DVU2737 0.76 +0.5 2,839,239 + -0.5 2,839,279 + +0.9 2,839,308 - -0.1 2,839,412 - -0.2 2,839,459 + +0.1 2,839,459 + -0.5 2,839,459 + +0.5 2,839,467 - -1.2 2,839,505 + -0.3 2,839,513 - -1.4 2,839,514 - -0.2 2,839,601 - -0.8 2,839,626 - -0.7 2,839,640 + -0.7 2,839,648 - +0.3 2,839,702 + -0.1 2,839,702 + -2.3 2,839,715 + -0.2 2,839,777 - +0.5 2,839,813 + DVU2738 0.11 +0.2 2,839,821 - DVU2738 0.12 -0.0 2,839,873 + DVU2738 0.14 -0.6 2,839,873 + DVU2738 0.14 +0.2 2,839,995 - DVU2738 0.19 -0.0 2,840,109 - DVU2738 0.23 -0.2 2,840,116 + DVU2738 0.24 +0.7 2,840,124 - DVU2738 0.24 +0.1 2,840,289 + DVU2738 0.31 -0.5
Or see this region's nucleotide sequence