Experiment: MoLS4 with L-Arginine as nutrient 10mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DVU2416 and DVU2417 overlap by 4 nucleotides DVU2417 and DVU2418 are separated by 435 nucleotides DVU2418 and DVU2419 are separated by 357 nucleotides
DVU2416: DVU2416 - conserved hypothetical protein (TIGR), at 2,524,701 to 2,525,183
DVU2416
DVU2417: DVU2417 - SlyX protein (TIGR), at 2,525,180 to 2,525,401
DVU2417
DVU2418: DVU2418 - vanZ-like family protein (TIGR), at 2,525,837 to 2,526,259
DVU2418
DVU2419: DVU2419 - conserved domain protein (TIGR), at 2,526,617 to 2,527,171
DVU2419
Position (kb)
2525
2526
2527 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 2524.837 kb on - strand, within DVU2416 at 2524.837 kb on - strand, within DVU2416 at 2524.957 kb on - strand, within DVU2416 at 2524.960 kb on + strand, within DVU2416 at 2524.985 kb on + strand, within DVU2416 at 2525.007 kb on + strand, within DVU2416 at 2525.033 kb on - strand, within DVU2416 at 2525.033 kb on - strand, within DVU2416 at 2525.033 kb on - strand, within DVU2416 at 2525.076 kb on - strand, within DVU2416 at 2525.263 kb on + strand, within DVU2417 at 2525.332 kb on + strand, within DVU2417 at 2525.345 kb on - strand, within DVU2417 at 2525.539 kb on + strand at 2525.566 kb on + strand at 2525.570 kb on + strand at 2525.573 kb on - strand at 2525.589 kb on + strand at 2525.621 kb on + strand at 2525.621 kb on + strand at 2525.623 kb on + strand at 2525.633 kb on + strand at 2525.695 kb on + strand at 2525.804 kb on - strand at 2525.816 kb on + strand at 2525.896 kb on - strand, within DVU2418 at 2525.912 kb on + strand, within DVU2418 at 2526.122 kb on - strand, within DVU2418 at 2526.124 kb on + strand, within DVU2418 at 2526.201 kb on - strand, within DVU2418 at 2526.228 kb on + strand at 2526.390 kb on + strand at 2526.390 kb on + strand at 2526.390 kb on + strand at 2526.390 kb on + strand at 2526.390 kb on + strand at 2526.398 kb on - strand at 2526.398 kb on - strand at 2526.410 kb on + strand at 2526.440 kb on - strand at 2526.567 kb on + strand at 2526.614 kb on + strand at 2526.621 kb on - strand at 2526.622 kb on - strand at 2526.624 kb on + strand at 2526.642 kb on + strand at 2526.690 kb on + strand, within DVU2419 at 2526.695 kb on - strand, within DVU2419 at 2526.759 kb on - strand, within DVU2419 at 2526.813 kb on - strand, within DVU2419 at 2526.826 kb on + strand, within DVU2419 at 2526.826 kb on + strand, within DVU2419 at 2526.842 kb on + strand, within DVU2419 at 2526.914 kb on + strand, within DVU2419 at 2526.960 kb on - strand, within DVU2419 at 2526.977 kb on - strand, within DVU2419 at 2527.194 kb on + strand at 2527.227 kb on + strand at 2527.254 kb on - strand at 2527.254 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction MoLS4 with L-Arginine as nutrient 10mM remove 2,524,837 - DVU2416 0.28 -0.7 2,524,837 - DVU2416 0.28 -0.8 2,524,957 - DVU2416 0.53 +0.6 2,524,960 + DVU2416 0.54 +0.2 2,524,985 + DVU2416 0.59 -0.2 2,525,007 + DVU2416 0.63 +0.2 2,525,033 - DVU2416 0.69 -0.2 2,525,033 - DVU2416 0.69 -0.4 2,525,033 - DVU2416 0.69 -2.4 2,525,076 - DVU2416 0.78 +0.6 2,525,263 + DVU2417 0.37 -0.6 2,525,332 + DVU2417 0.68 +0.2 2,525,345 - DVU2417 0.74 +0.2 2,525,539 + -0.8 2,525,566 + -0.7 2,525,570 + +0.7 2,525,573 - +0.7 2,525,589 + -0.4 2,525,621 + +0.9 2,525,621 + -1.3 2,525,623 + -0.1 2,525,633 + -1.5 2,525,695 + +2.5 2,525,804 - -0.0 2,525,816 + -1.0 2,525,896 - DVU2418 0.14 +0.1 2,525,912 + DVU2418 0.18 -0.0 2,526,122 - DVU2418 0.67 +1.0 2,526,124 + DVU2418 0.68 +0.0 2,526,201 - DVU2418 0.86 -0.2 2,526,228 + +1.9 2,526,390 + -1.1 2,526,390 + -0.1 2,526,390 + -0.1 2,526,390 + +1.1 2,526,390 + -1.3 2,526,398 - +0.0 2,526,398 - +0.2 2,526,410 + +0.2 2,526,440 - +0.1 2,526,567 + +0.4 2,526,614 + -0.8 2,526,621 - +0.5 2,526,622 - -0.1 2,526,624 + -0.3 2,526,642 + -0.2 2,526,690 + DVU2419 0.13 +0.2 2,526,695 - DVU2419 0.14 -0.8 2,526,759 - DVU2419 0.26 -1.2 2,526,813 - DVU2419 0.35 -0.1 2,526,826 + DVU2419 0.38 -0.1 2,526,826 + DVU2419 0.38 -0.2 2,526,842 + DVU2419 0.41 -0.6 2,526,914 + DVU2419 0.54 -0.3 2,526,960 - DVU2419 0.62 +0.1 2,526,977 - DVU2419 0.65 -0.0 2,527,194 + -0.2 2,527,227 + -0.0 2,527,254 - -0.3 2,527,254 - -0.1
Or see this region's nucleotide sequence