Experiment: MoLS4 with L-Arginine as nutrient 10mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DVU1724 and DVU1725 overlap by 14 nucleotides DVU1725 and DVU1726 are separated by 135 nucleotides DVU1726 and DVU1727 overlap by 4 nucleotides DVU1727 and DVU1728 overlap by 1 nucleotides
DVU1724: DVU1724 - phage uncharacterized protein, putative (TIGR), at 1,797,329 to 1,798,933
DVU1724
DVU1725: DVU1725 - conserved hypothetical protein (TIGR), at 1,798,920 to 1,799,528
DVU1725
DVU1726: DVU1726 - hypothetical protein (TIGR), at 1,799,664 to 1,799,912
DVU1726
DVU1727: DVU1727 - hypothetical protein (TIGR), at 1,799,909 to 1,800,259
DVU1727
DVU1728: DVU1728 - conserved hypothetical protein (TIGR), at 1,800,259 to 1,800,675
DVU1728
Position (kb)
1799
1800 Strain fitness (log2 ratio)
-2
-1
0
1 at 1798.692 kb on - strand, within DVU1724 at 1798.731 kb on + strand, within DVU1724 at 1798.787 kb on - strand at 1798.789 kb on + strand at 1798.789 kb on + strand at 1798.797 kb on - strand at 1798.797 kb on - strand at 1798.797 kb on - strand at 1798.797 kb on - strand at 1798.858 kb on + strand at 1798.858 kb on + strand at 1798.861 kb on - strand at 1798.933 kb on - strand at 1798.938 kb on - strand at 1799.036 kb on + strand, within DVU1725 at 1799.044 kb on - strand, within DVU1725 at 1799.141 kb on + strand, within DVU1725 at 1799.149 kb on - strand, within DVU1725 at 1799.171 kb on + strand, within DVU1725 at 1799.171 kb on + strand, within DVU1725 at 1799.179 kb on - strand, within DVU1725 at 1799.179 kb on - strand, within DVU1725 at 1799.218 kb on + strand, within DVU1725 at 1799.224 kb on + strand, within DVU1725 at 1799.225 kb on - strand, within DVU1725 at 1799.274 kb on + strand, within DVU1725 at 1799.287 kb on + strand, within DVU1725 at 1799.397 kb on + strand, within DVU1725 at 1799.433 kb on - strand, within DVU1725 at 1799.524 kb on + strand at 1799.806 kb on - strand, within DVU1726 at 1799.970 kb on - strand, within DVU1727 at 1799.994 kb on + strand, within DVU1727 at 1800.048 kb on - strand, within DVU1727 at 1800.064 kb on + strand, within DVU1727 at 1800.593 kb on - strand, within DVU1728 at 1800.632 kb on + strand, within DVU1728 at 1800.671 kb on + strand at 1800.683 kb on + strand at 1800.683 kb on + strand at 1800.753 kb on + strand at 1800.777 kb on - strand at 1800.801 kb on - strand at 1800.859 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction MoLS4 with L-Arginine as nutrient 10mM remove 1,798,692 - DVU1724 0.85 -0.5 1,798,731 + DVU1724 0.87 +1.2 1,798,787 - +1.0 1,798,789 + +0.9 1,798,789 + +0.6 1,798,797 - +0.1 1,798,797 - -0.9 1,798,797 - -0.5 1,798,797 - -0.0 1,798,858 + -1.0 1,798,858 + -0.1 1,798,861 - -1.0 1,798,933 - +0.6 1,798,938 - -0.5 1,799,036 + DVU1725 0.19 +0.1 1,799,044 - DVU1725 0.20 -0.9 1,799,141 + DVU1725 0.36 +0.3 1,799,149 - DVU1725 0.38 -0.2 1,799,171 + DVU1725 0.41 -1.1 1,799,171 + DVU1725 0.41 +0.0 1,799,179 - DVU1725 0.43 -0.0 1,799,179 - DVU1725 0.43 -0.2 1,799,218 + DVU1725 0.49 +0.3 1,799,224 + DVU1725 0.50 +0.0 1,799,225 - DVU1725 0.50 -0.1 1,799,274 + DVU1725 0.58 +0.6 1,799,287 + DVU1725 0.60 -0.9 1,799,397 + DVU1725 0.78 -0.7 1,799,433 - DVU1725 0.84 +0.3 1,799,524 + +1.2 1,799,806 - DVU1726 0.57 +0.2 1,799,970 - DVU1727 0.17 -0.4 1,799,994 + DVU1727 0.24 -0.2 1,800,048 - DVU1727 0.40 -1.9 1,800,064 + DVU1727 0.44 +0.0 1,800,593 - DVU1728 0.80 +0.2 1,800,632 + DVU1728 0.89 -1.0 1,800,671 + -0.2 1,800,683 + -0.4 1,800,683 + +0.3 1,800,753 + -0.3 1,800,777 - -0.1 1,800,801 - +0.3 1,800,859 - -0.2
Or see this region's nucleotide sequence