Experiment: MoLS4 with L-Arginine as nutrient 10mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DVU1721 and DVU1722 are separated by 0 nucleotides DVU1722 and DVU1723 are separated by 254 nucleotides DVU1723 and DVU1724 overlap by 4 nucleotides DVU1724 and DVU1725 overlap by 14 nucleotides DVU1725 and DVU1726 are separated by 135 nucleotides DVU1726 and DVU1727 overlap by 4 nucleotides
DVU1721: DVU1721 - hypothetical protein (TIGR), at 1,794,775 to 1,796,427
DVU1721
DVU1722: DVU1722 - hypothetical protein (TIGR), at 1,796,428 to 1,796,523
DVU1722
DVU1723: DVU1723 - hypothetical protein (TIGR), at 1,796,778 to 1,797,332
DVU1723
DVU1724: DVU1724 - phage uncharacterized protein, putative (TIGR), at 1,797,329 to 1,798,933
DVU1724
DVU1725: DVU1725 - conserved hypothetical protein (TIGR), at 1,798,920 to 1,799,528
DVU1725
DVU1726: DVU1726 - hypothetical protein (TIGR), at 1,799,664 to 1,799,912
DVU1726
DVU1727: DVU1727 - hypothetical protein (TIGR), at 1,799,909 to 1,800,259
DVU1727
Position (kb)
1797
1798
1799 Strain fitness (log2 ratio)
-1
0
1
2 at 1796.388 kb on - strand at 1796.405 kb on + strand at 1796.410 kb on + strand at 1796.497 kb on + strand, within DVU1722 at 1796.505 kb on - strand, within DVU1722 at 1796.510 kb on - strand, within DVU1722 at 1796.545 kb on - strand at 1796.721 kb on + strand at 1796.793 kb on - strand at 1796.793 kb on - strand at 1796.795 kb on + strand at 1796.863 kb on - strand, within DVU1723 at 1796.879 kb on - strand, within DVU1723 at 1796.901 kb on + strand, within DVU1723 at 1796.901 kb on + strand, within DVU1723 at 1796.909 kb on - strand, within DVU1723 at 1796.909 kb on - strand, within DVU1723 at 1796.909 kb on - strand, within DVU1723 at 1796.916 kb on + strand, within DVU1723 at 1796.924 kb on - strand, within DVU1723 at 1796.926 kb on + strand, within DVU1723 at 1797.023 kb on - strand, within DVU1723 at 1797.105 kb on + strand, within DVU1723 at 1797.153 kb on + strand, within DVU1723 at 1797.200 kb on - strand, within DVU1723 at 1797.225 kb on + strand, within DVU1723 at 1797.232 kb on + strand, within DVU1723 at 1797.233 kb on - strand, within DVU1723 at 1797.453 kb on - strand at 1797.562 kb on + strand, within DVU1724 at 1797.562 kb on + strand, within DVU1724 at 1797.570 kb on - strand, within DVU1724 at 1797.660 kb on + strand, within DVU1724 at 1797.665 kb on + strand, within DVU1724 at 1797.668 kb on - strand, within DVU1724 at 1797.668 kb on - strand, within DVU1724 at 1797.668 kb on - strand, within DVU1724 at 1797.713 kb on + strand, within DVU1724 at 1797.713 kb on + strand, within DVU1724 at 1797.716 kb on - strand, within DVU1724 at 1797.716 kb on - strand, within DVU1724 at 1797.723 kb on + strand, within DVU1724 at 1797.723 kb on + strand, within DVU1724 at 1797.731 kb on - strand, within DVU1724 at 1797.736 kb on - strand, within DVU1724 at 1797.798 kb on + strand, within DVU1724 at 1797.847 kb on + strand, within DVU1724 at 1797.866 kb on + strand, within DVU1724 at 1797.885 kb on + strand, within DVU1724 at 1797.892 kb on - strand, within DVU1724 at 1797.906 kb on - strand, within DVU1724 at 1797.934 kb on - strand, within DVU1724 at 1797.967 kb on + strand, within DVU1724 at 1797.985 kb on + strand, within DVU1724 at 1798.032 kb on + strand, within DVU1724 at 1798.032 kb on + strand, within DVU1724 at 1798.032 kb on + strand, within DVU1724 at 1798.203 kb on + strand, within DVU1724 at 1798.244 kb on - strand, within DVU1724 at 1798.263 kb on - strand, within DVU1724 at 1798.281 kb on - strand, within DVU1724 at 1798.288 kb on - strand, within DVU1724 at 1798.341 kb on + strand, within DVU1724 at 1798.376 kb on - strand, within DVU1724 at 1798.399 kb on - strand, within DVU1724 at 1798.407 kb on - strand, within DVU1724 at 1798.414 kb on + strand, within DVU1724 at 1798.414 kb on + strand, within DVU1724 at 1798.421 kb on - strand, within DVU1724 at 1798.422 kb on - strand, within DVU1724 at 1798.446 kb on + strand, within DVU1724 at 1798.498 kb on + strand, within DVU1724 at 1798.527 kb on - strand, within DVU1724 at 1798.578 kb on - strand, within DVU1724 at 1798.600 kb on + strand, within DVU1724 at 1798.614 kb on + strand, within DVU1724 at 1798.692 kb on - strand, within DVU1724 at 1798.731 kb on + strand, within DVU1724 at 1798.787 kb on - strand at 1798.789 kb on + strand at 1798.789 kb on + strand at 1798.797 kb on - strand at 1798.797 kb on - strand at 1798.797 kb on - strand at 1798.797 kb on - strand at 1798.858 kb on + strand at 1798.858 kb on + strand at 1798.861 kb on - strand at 1798.933 kb on - strand at 1798.938 kb on - strand at 1799.036 kb on + strand, within DVU1725 at 1799.044 kb on - strand, within DVU1725 at 1799.141 kb on + strand, within DVU1725 at 1799.149 kb on - strand, within DVU1725 at 1799.171 kb on + strand, within DVU1725 at 1799.171 kb on + strand, within DVU1725 at 1799.179 kb on - strand, within DVU1725 at 1799.179 kb on - strand, within DVU1725 at 1799.218 kb on + strand, within DVU1725 at 1799.224 kb on + strand, within DVU1725 at 1799.225 kb on - strand, within DVU1725 at 1799.274 kb on + strand, within DVU1725 at 1799.287 kb on + strand, within DVU1725 at 1799.397 kb on + strand, within DVU1725 at 1799.433 kb on - strand, within DVU1725 at 1799.524 kb on + strand at 1799.806 kb on - strand, within DVU1726
Per-strain Table
Position Strand Gene LocusTag Fraction MoLS4 with L-Arginine as nutrient 10mM remove 1,796,388 - +0.1 1,796,405 + +0.0 1,796,410 + +0.4 1,796,497 + DVU1722 0.72 -1.0 1,796,505 - DVU1722 0.80 -0.3 1,796,510 - DVU1722 0.85 +0.2 1,796,545 - +0.2 1,796,721 + -0.6 1,796,793 - +0.2 1,796,793 - -0.2 1,796,795 + -1.0 1,796,863 - DVU1723 0.15 +0.0 1,796,879 - DVU1723 0.18 +2.6 1,796,901 + DVU1723 0.22 +0.4 1,796,901 + DVU1723 0.22 +0.1 1,796,909 - DVU1723 0.24 -1.1 1,796,909 - DVU1723 0.24 -0.1 1,796,909 - DVU1723 0.24 +2.6 1,796,916 + DVU1723 0.25 +0.6 1,796,924 - DVU1723 0.26 -1.2 1,796,926 + DVU1723 0.27 +0.1 1,797,023 - DVU1723 0.44 +0.6 1,797,105 + DVU1723 0.59 -0.2 1,797,153 + DVU1723 0.68 -1.5 1,797,200 - DVU1723 0.76 -0.6 1,797,225 + DVU1723 0.81 -0.6 1,797,232 + DVU1723 0.82 -0.8 1,797,233 - DVU1723 0.82 -0.2 1,797,453 - +0.8 1,797,562 + DVU1724 0.15 +0.1 1,797,562 + DVU1724 0.15 +0.1 1,797,570 - DVU1724 0.15 +0.1 1,797,660 + DVU1724 0.21 -0.8 1,797,665 + DVU1724 0.21 -0.0 1,797,668 - DVU1724 0.21 +0.0 1,797,668 - DVU1724 0.21 +0.4 1,797,668 - DVU1724 0.21 -0.4 1,797,713 + DVU1724 0.24 +1.3 1,797,713 + DVU1724 0.24 +0.6 1,797,716 - DVU1724 0.24 +0.2 1,797,716 - DVU1724 0.24 +1.3 1,797,723 + DVU1724 0.25 +0.3 1,797,723 + DVU1724 0.25 -0.3 1,797,731 - DVU1724 0.25 -1.0 1,797,736 - DVU1724 0.25 +0.2 1,797,798 + DVU1724 0.29 +0.8 1,797,847 + DVU1724 0.32 +0.3 1,797,866 + DVU1724 0.33 +0.3 1,797,885 + DVU1724 0.35 +1.2 1,797,892 - DVU1724 0.35 -0.3 1,797,906 - DVU1724 0.36 +0.3 1,797,934 - DVU1724 0.38 -0.0 1,797,967 + DVU1724 0.40 +0.0 1,797,985 + DVU1724 0.41 -0.5 1,798,032 + DVU1724 0.44 -0.0 1,798,032 + DVU1724 0.44 -0.7 1,798,032 + DVU1724 0.44 +0.2 1,798,203 + DVU1724 0.54 +0.1 1,798,244 - DVU1724 0.57 +0.7 1,798,263 - DVU1724 0.58 -0.3 1,798,281 - DVU1724 0.59 +0.1 1,798,288 - DVU1724 0.60 -1.3 1,798,341 + DVU1724 0.63 +0.1 1,798,376 - DVU1724 0.65 +0.1 1,798,399 - DVU1724 0.67 +0.7 1,798,407 - DVU1724 0.67 -0.4 1,798,414 + DVU1724 0.68 +0.0 1,798,414 + DVU1724 0.68 -0.5 1,798,421 - DVU1724 0.68 +0.5 1,798,422 - DVU1724 0.68 -0.9 1,798,446 + DVU1724 0.70 -1.3 1,798,498 + DVU1724 0.73 -1.5 1,798,527 - DVU1724 0.75 +0.1 1,798,578 - DVU1724 0.78 +0.0 1,798,600 + DVU1724 0.79 +0.4 1,798,614 + DVU1724 0.80 -0.1 1,798,692 - DVU1724 0.85 -0.5 1,798,731 + DVU1724 0.87 +1.2 1,798,787 - +1.0 1,798,789 + +0.9 1,798,789 + +0.6 1,798,797 - +0.1 1,798,797 - -0.9 1,798,797 - -0.5 1,798,797 - -0.0 1,798,858 + -1.0 1,798,858 + -0.1 1,798,861 - -1.0 1,798,933 - +0.6 1,798,938 - -0.5 1,799,036 + DVU1725 0.19 +0.1 1,799,044 - DVU1725 0.20 -0.9 1,799,141 + DVU1725 0.36 +0.3 1,799,149 - DVU1725 0.38 -0.2 1,799,171 + DVU1725 0.41 -1.1 1,799,171 + DVU1725 0.41 +0.0 1,799,179 - DVU1725 0.43 -0.0 1,799,179 - DVU1725 0.43 -0.2 1,799,218 + DVU1725 0.49 +0.3 1,799,224 + DVU1725 0.50 +0.0 1,799,225 - DVU1725 0.50 -0.1 1,799,274 + DVU1725 0.58 +0.6 1,799,287 + DVU1725 0.60 -0.9 1,799,397 + DVU1725 0.78 -0.7 1,799,433 - DVU1725 0.84 +0.3 1,799,524 + +1.2 1,799,806 - DVU1726 0.57 +0.2
Or see this region's nucleotide sequence