Experiment: MoLS4 with L-Arginine as nutrient 10mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt aor-2 and DVU0688 are separated by 0 nucleotides DVU0688 and rnhA are separated by 9 nucleotides rnhA and DORF29743 are separated by 166 nucleotides DORF29743 and DVU0690 are separated by 75 nucleotides
DVU0687: aor-2 - aldehyde:ferredoxin oxidoreductase, tungsten-containing, putative (TIGR), at 761,222 to 763,006
aor-2
DVU0688: DVU0688 - hypothetical protein (TIGR), at 763,007 to 763,507
DVU0688
DVU0689: rnhA - ribonuclease HI (TIGR), at 763,517 to 763,987
rnhA
DORF29743: DORF29743 - no description, at 764,154 to 764,273
DORF29743
DVU0690: DVU0690 - conserved hypothetical protein (TIGR), at 764,349 to 765,020
DVU0690
Position (kb) 763
764 Strain fitness (log2 ratio) -2
-1
0
1 at 762.070 kb on - strand, within aor-2 at 762.222 kb on + strand, within aor-2 at 762.222 kb on + strand, within aor-2 at 762.246 kb on - strand, within aor-2 at 762.295 kb on + strand, within aor-2 at 762.295 kb on - strand, within aor-2 at 762.314 kb on + strand, within aor-2 at 762.327 kb on - strand, within aor-2 at 762.424 kb on - strand, within aor-2 at 762.460 kb on + strand, within aor-2 at 762.468 kb on - strand, within aor-2 at 762.487 kb on + strand, within aor-2 at 762.495 kb on - strand, within aor-2 at 762.511 kb on - strand, within aor-2 at 762.588 kb on - strand, within aor-2 at 762.593 kb on + strand, within aor-2 at 762.634 kb on + strand, within aor-2 at 762.634 kb on + strand, within aor-2 at 762.637 kb on - strand, within aor-2 at 762.642 kb on - strand, within aor-2 at 762.646 kb on + strand, within aor-2 at 762.646 kb on + strand, within aor-2 at 762.646 kb on + strand, within aor-2 at 762.646 kb on + strand, within aor-2 at 762.646 kb on + strand, within aor-2 at 762.654 kb on - strand, within aor-2 at 762.758 kb on + strand, within aor-2 at 762.789 kb on + strand, within aor-2 at 762.952 kb on + strand at 762.960 kb on - strand at 762.990 kb on - strand at 763.001 kb on + strand at 763.017 kb on + strand at 763.025 kb on - strand at 763.025 kb on - strand at 763.036 kb on - strand at 763.038 kb on - strand at 763.075 kb on + strand, within DVU0688 at 763.080 kb on + strand, within DVU0688 at 763.080 kb on + strand, within DVU0688 at 763.083 kb on - strand, within DVU0688 at 763.088 kb on - strand, within DVU0688 at 763.088 kb on - strand, within DVU0688 at 763.104 kb on - strand, within DVU0688 at 763.126 kb on + strand, within DVU0688 at 763.140 kb on - strand, within DVU0688 at 763.319 kb on - strand, within DVU0688 at 763.374 kb on - strand, within DVU0688 at 763.417 kb on - strand, within DVU0688 at 763.530 kb on + strand at 763.727 kb on + strand, within rnhA at 763.786 kb on - strand, within rnhA at 764.084 kb on + strand at 764.087 kb on - strand at 764.168 kb on + strand, within DORF29743 at 764.230 kb on - strand, within DORF29743 at 764.347 kb on + strand at 764.351 kb on + strand at 764.396 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction MoLS4 with L-Arginine as nutrient 10mM remove 762,070 - aor-2 DVU0687 0.48 +0.1 762,222 + aor-2 DVU0687 0.56 +0.2 762,222 + aor-2 DVU0687 0.56 +0.5 762,246 - aor-2 DVU0687 0.57 +1.5 762,295 + aor-2 DVU0687 0.60 +0.9 762,295 - aor-2 DVU0687 0.60 -1.0 762,314 + aor-2 DVU0687 0.61 +0.0 762,327 - aor-2 DVU0687 0.62 -0.1 762,424 - aor-2 DVU0687 0.67 -0.1 762,460 + aor-2 DVU0687 0.69 -2.0 762,468 - aor-2 DVU0687 0.70 -1.1 762,487 + aor-2 DVU0687 0.71 -0.8 762,495 - aor-2 DVU0687 0.71 -0.1 762,511 - aor-2 DVU0687 0.72 -0.2 762,588 - aor-2 DVU0687 0.77 +1.0 762,593 + aor-2 DVU0687 0.77 +0.6 762,634 + aor-2 DVU0687 0.79 -0.1 762,634 + aor-2 DVU0687 0.79 +1.5 762,637 - aor-2 DVU0687 0.79 -0.1 762,642 - aor-2 DVU0687 0.80 -0.2 762,646 + aor-2 DVU0687 0.80 -1.5 762,646 + aor-2 DVU0687 0.80 -2.6 762,646 + aor-2 DVU0687 0.80 -1.4 762,646 + aor-2 DVU0687 0.80 -1.2 762,646 + aor-2 DVU0687 0.80 -0.7 762,654 - aor-2 DVU0687 0.80 -0.4 762,758 + aor-2 DVU0687 0.86 -0.0 762,789 + aor-2 DVU0687 0.88 -0.0 762,952 + -0.3 762,960 - +0.5 762,990 - -0.6 763,001 + +0.2 763,017 + -1.2 763,025 - +0.5 763,025 - -0.6 763,036 - +0.3 763,038 - +0.2 763,075 + DVU0688 0.14 -0.1 763,080 + DVU0688 0.15 +0.2 763,080 + DVU0688 0.15 +0.1 763,083 - DVU0688 0.15 +0.2 763,088 - DVU0688 0.16 -0.9 763,088 - DVU0688 0.16 +0.3 763,104 - DVU0688 0.19 -1.3 763,126 + DVU0688 0.24 +0.3 763,140 - DVU0688 0.27 -0.2 763,319 - DVU0688 0.62 +0.1 763,374 - DVU0688 0.73 +0.2 763,417 - DVU0688 0.82 +0.1 763,530 + -0.4 763,727 + rnhA DVU0689 0.45 +0.4 763,786 - rnhA DVU0689 0.57 +0.7 764,084 + +0.0 764,087 - +0.5 764,168 + DORF29743 0.12 -0.3 764,230 - DORF29743 0.63 +0.0 764,347 + -0.8 764,351 + -0.1 764,396 - -0.9
Or see this region's nucleotide sequence