Experiment: MoLS4 with L-Arginine as nutrient 10mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DVU2689 and DVU2690 are separated by 2 nucleotides DVU2690 and DORF43274 overlap by 8 nucleotides DORF43274 and DVU2691 overlap by 49 nucleotides DVU2691 and DVU2692 are separated by 9 nucleotides DVU2692 and DVU2693 are separated by 85 nucleotides
DVU2689: DVU2689 - bacteriophage DNA transposition B protein (TIGR), at 2,803,529 to 2,804,314
DVU2689
DVU2690: DVU2690 - hypothetical protein (TIGR), at 2,804,317 to 2,804,904
DVU2690
DORF43274: DORF43274 - no description, at 2,804,897 to 2,805,226
DORF43274
DVU2691: DVU2691 - hypothetical protein (TIGR), at 2,805,178 to 2,805,711
DVU2691
DVU2692: DVU2692 - conserved domain protein (TIGR), at 2,805,721 to 2,805,957
DVU2692
DVU2693: DVU2693 - hypothetical protein (TIGR), at 2,806,043 to 2,806,282
DVU2693
Position (kb)
2804
2805
2806 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 2803.901 kb on + strand, within DVU2689 at 2803.930 kb on + strand, within DVU2689 at 2803.939 kb on - strand, within DVU2689 at 2803.960 kb on - strand, within DVU2689 at 2804.008 kb on + strand, within DVU2689 at 2804.036 kb on + strand, within DVU2689 at 2804.036 kb on + strand, within DVU2689 at 2804.036 kb on + strand, within DVU2689 at 2804.044 kb on - strand, within DVU2689 at 2804.062 kb on + strand, within DVU2689 at 2804.142 kb on + strand, within DVU2689 at 2804.144 kb on + strand, within DVU2689 at 2804.158 kb on + strand, within DVU2689 at 2804.238 kb on - strand at 2804.296 kb on + strand at 2804.296 kb on + strand at 2804.304 kb on - strand at 2804.475 kb on - strand, within DVU2690 at 2804.483 kb on - strand, within DVU2690 at 2804.495 kb on + strand, within DVU2690 at 2804.570 kb on - strand, within DVU2690 at 2804.637 kb on - strand, within DVU2690 at 2804.675 kb on + strand, within DVU2690 at 2804.675 kb on + strand, within DVU2690 at 2804.676 kb on + strand, within DVU2690 at 2804.683 kb on - strand, within DVU2690 at 2804.683 kb on - strand, within DVU2690 at 2804.759 kb on + strand, within DVU2690 at 2804.765 kb on - strand, within DVU2690 at 2804.821 kb on - strand, within DVU2690 at 2804.825 kb on + strand, within DVU2690 at 2804.879 kb on - strand at 2804.887 kb on - strand at 2804.893 kb on + strand at 2804.893 kb on + strand at 2804.893 kb on + strand at 2804.907 kb on + strand at 2805.015 kb on - strand, within DORF43274 at 2805.015 kb on - strand, within DORF43274 at 2805.061 kb on - strand, within DORF43274 at 2805.114 kb on - strand, within DORF43274 at 2805.123 kb on + strand, within DORF43274 at 2805.191 kb on + strand at 2805.259 kb on + strand, within DVU2691 at 2805.259 kb on + strand, within DVU2691 at 2805.478 kb on + strand, within DVU2691 at 2805.486 kb on - strand, within DVU2691 at 2805.533 kb on - strand, within DVU2691 at 2805.552 kb on - strand, within DVU2691 at 2805.552 kb on - strand, within DVU2691 at 2805.636 kb on + strand, within DVU2691 at 2805.645 kb on - strand, within DVU2691 at 2805.687 kb on - strand at 2805.687 kb on - strand at 2805.687 kb on - strand at 2805.743 kb on - strand at 2805.865 kb on + strand, within DVU2692 at 2805.946 kb on - strand at 2806.015 kb on + strand at 2806.155 kb on + strand, within DVU2693 at 2806.155 kb on + strand, within DVU2693 at 2806.155 kb on + strand, within DVU2693 at 2806.155 kb on + strand, within DVU2693 at 2806.155 kb on + strand, within DVU2693 at 2806.155 kb on + strand, within DVU2693 at 2806.163 kb on - strand, within DVU2693 at 2806.163 kb on - strand, within DVU2693 at 2806.163 kb on - strand, within DVU2693 at 2806.163 kb on - strand, within DVU2693
Per-strain Table
Position Strand Gene LocusTag Fraction MoLS4 with L-Arginine as nutrient 10mM remove 2,803,901 + DVU2689 0.47 -1.3 2,803,930 + DVU2689 0.51 -1.1 2,803,939 - DVU2689 0.52 -0.6 2,803,960 - DVU2689 0.55 -0.2 2,804,008 + DVU2689 0.61 -0.3 2,804,036 + DVU2689 0.65 -2.5 2,804,036 + DVU2689 0.65 -0.5 2,804,036 + DVU2689 0.65 -1.0 2,804,044 - DVU2689 0.66 -0.9 2,804,062 + DVU2689 0.68 -0.3 2,804,142 + DVU2689 0.78 -0.4 2,804,144 + DVU2689 0.78 +2.2 2,804,158 + DVU2689 0.80 -0.4 2,804,238 - +0.1 2,804,296 + +0.1 2,804,296 + -1.2 2,804,304 - -0.8 2,804,475 - DVU2690 0.27 -1.1 2,804,483 - DVU2690 0.28 -0.2 2,804,495 + DVU2690 0.30 -0.4 2,804,570 - DVU2690 0.43 -0.1 2,804,637 - DVU2690 0.54 -0.3 2,804,675 + DVU2690 0.61 -0.0 2,804,675 + DVU2690 0.61 -0.5 2,804,676 + DVU2690 0.61 +1.1 2,804,683 - DVU2690 0.62 +0.1 2,804,683 - DVU2690 0.62 -0.5 2,804,759 + DVU2690 0.75 -0.4 2,804,765 - DVU2690 0.76 -0.1 2,804,821 - DVU2690 0.86 -0.1 2,804,825 + DVU2690 0.86 -0.3 2,804,879 - +0.1 2,804,887 - -0.2 2,804,893 + -1.1 2,804,893 + -1.1 2,804,893 + -0.7 2,804,907 + +1.5 2,805,015 - DORF43274 0.36 -0.1 2,805,015 - DORF43274 0.36 -0.0 2,805,061 - DORF43274 0.50 -0.1 2,805,114 - DORF43274 0.66 -0.0 2,805,123 + DORF43274 0.68 +1.5 2,805,191 + -0.3 2,805,259 + DVU2691 0.15 -1.4 2,805,259 + DVU2691 0.15 +0.7 2,805,478 + DVU2691 0.56 -0.1 2,805,486 - DVU2691 0.58 -0.2 2,805,533 - DVU2691 0.66 -1.1 2,805,552 - DVU2691 0.70 +0.0 2,805,552 - DVU2691 0.70 +0.0 2,805,636 + DVU2691 0.86 +0.0 2,805,645 - DVU2691 0.87 -1.1 2,805,687 - +0.0 2,805,687 - +0.2 2,805,687 - -0.3 2,805,743 - +0.3 2,805,865 + DVU2692 0.61 +0.1 2,805,946 - +1.7 2,806,015 + -0.4 2,806,155 + DVU2693 0.47 -0.0 2,806,155 + DVU2693 0.47 +0.7 2,806,155 + DVU2693 0.47 +0.1 2,806,155 + DVU2693 0.47 -0.2 2,806,155 + DVU2693 0.47 -0.2 2,806,155 + DVU2693 0.47 +0.4 2,806,163 - DVU2693 0.50 +0.5 2,806,163 - DVU2693 0.50 -0.1 2,806,163 - DVU2693 0.50 -0.5 2,806,163 - DVU2693 0.50 -1.5
Or see this region's nucleotide sequence