Strain Fitness in Pseudomonas syringae pv. syringae B728a around Psyr_3017

Experiment: KB with Avocatin A 10 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	KB with Avocatin A 10 mM
3,613,163	-		Psyr_3016	0.80	-0.8
3,613,163	-		Psyr_3016	0.80	-1.4
3,613,464	+				-0.8
3,613,550	-				+0.6
3,613,550	-				-1.2
3,613,661	-				+0.1
3,613,876	+				-1.7
3,613,876	+				-0.5
3,613,877	-				-2.8
3,613,877	-				-0.0
3,613,877	-				-0.9
3,613,974	-				+0.9
3,614,185	+		Psyr_3017	0.54	-0.0
3,614,185	+		Psyr_3017	0.54	+0.4
3,614,186	-		Psyr_3017	0.55	+0.7
3,614,297	+				+0.2
3,614,297	+				-0.6
3,614,298	-				+0.1
3,614,455	+		Psyr_3018	0.24	-2.7
3,614,456	-		Psyr_3018	0.24	-1.7
3,614,456	-		Psyr_3018	0.24	+0.2
3,614,567	+				+0.4
3,614,568	-		Psyr_3018	0.40	+0.2
3,614,568	-		Psyr_3018	0.40	+0.8
3,614,709	+		Psyr_3018	0.59	+3.0
3,614,709	+		Psyr_3018	0.59	-0.3
3,614,709	+		Psyr_3018	0.59	+2.4
3,614,710	-		Psyr_3018	0.60	+0.1