Strain Fitness in Pseudomonas syringae pv. syringae B728a around Psyr_2786

Experiment: KB with Avocatin A 10 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	KB with Avocatin A 10 mM
3,370,041	+		Psyr_2784	0.31	-1.2
3,370,042	-		Psyr_2784	0.31	-0.2
3,370,140	+		Psyr_2784	0.55	-0.3
3,370,140	+		Psyr_2784	0.55	-2.0
3,370,140	+		Psyr_2784	0.55	+0.6
3,370,141	-		Psyr_2784	0.55	-2.3
3,370,141	-		Psyr_2784	0.55	-1.5
3,370,206	+		Psyr_2784	0.71	-1.2
3,370,206	+		Psyr_2784	0.71	-0.2
3,370,206	+		Psyr_2784	0.71	+0.3
3,370,324	+				+0.7
3,370,325	-				-0.7
3,370,457	+		Psyr_2785	0.21	+0.0
3,370,458	-		Psyr_2785	0.21	+1.6
3,370,458	-		Psyr_2785	0.21	-0.3
3,370,604	+		Psyr_2785	0.43	-0.5
3,370,604	+		Psyr_2785	0.43	+1.1
3,370,604	+		Psyr_2785	0.43	+0.5
3,370,604	+		Psyr_2785	0.43	-0.3
3,370,605	-		Psyr_2785	0.43	-0.0
3,370,618	+		Psyr_2785	0.45	-0.5
3,370,618	+		Psyr_2785	0.45	+1.6
3,370,619	-		Psyr_2785	0.45	+1.6
3,370,676	+		Psyr_2785	0.54	-0.6
3,370,677	-		Psyr_2785	0.54	+2.6
3,370,677	-		Psyr_2785	0.54	+0.6
3,370,876	+		Psyr_2785	0.84	-2.0
3,370,877	-		Psyr_2785	0.85	-0.4
3,370,877	-		Psyr_2785	0.85	+1.6
3,370,997	-				+2.6
3,371,199	+		Psyr_2786	0.61	-1.0
3,371,199	+		Psyr_2786	0.61	+0.3
3,371,200	-		Psyr_2786	0.61	-0.8
3,371,200	-		Psyr_2786	0.61	+0.7
3,371,200	-		Psyr_2786	0.61	-2.3
3,371,276	+		Psyr_2786	0.82	+1.2
3,371,277	-		Psyr_2786	0.82	-2.2
3,371,301	+		Psyr_2786	0.89	+0.1
3,371,301	+		Psyr_2786	0.89	+0.0
3,371,301	+		Psyr_2786	0.89	-2.1
3,371,302	-		Psyr_2786	0.89	-2.0
3,371,332	+				+0.2
3,371,346	+				+0.2
3,371,346	+				+0.9
3,371,346	+				+0.6
3,371,346	+				-0.4
3,371,347	-				-0.2
3,371,347	-				+0.2
3,371,347	-				-0.2
3,371,397	+				-0.8
3,371,397	+				-1.7
3,371,398	-				-2.4
3,371,413	+				+1.0
3,371,413	+				-0.4
3,371,414	-				-1.6
3,371,425	+				-0.6
3,371,425	+				+0.4
3,371,425	+				+3.3
3,371,448	+				+1.1
3,371,448	+				+0.5
3,371,448	+				-0.6
3,371,448	+				-0.5
3,371,451	+				-0.4
3,371,452	-				+0.6
3,371,531	+				-0.1
3,371,531	+				+0.3
3,371,531	+				-0.4
3,371,531	+				+1.2
3,371,532	-				-0.8
3,371,532	-				-0.1
3,371,532	-				-0.3
3,371,637	+				+0.6
3,371,638	-				-0.6
3,371,640	-				-0.1
3,371,644	+				-1.6
3,371,644	+				-0.5
3,371,644	+				-0.8
3,371,644	+				+0.6
3,371,644	+				+0.2
3,371,644	+				-0.6
3,371,644	+				+1.4
3,371,644	+				+0.8
3,371,644	+				-0.3
3,371,644	+				-0.9
3,371,644	+				-0.4
3,371,645	-				+0.0
3,371,645	-				+1.0
3,371,645	-				-3.6
3,371,645	-				-0.5
3,371,645	-				-1.4
3,371,645	-				+1.1
3,371,645	-				+1.4
3,371,645	-				+1.5
3,371,645	-				+0.3
3,371,645	-				-1.2
3,371,645	-				-1.5
3,371,645	-				+0.3
3,371,645	-				-0.3
3,371,645	-				+0.4
3,371,675	+				-0.1
3,371,675	+				-0.5
3,371,675	+				-1.8
3,371,676	-				+1.6
3,371,676	-				+0.3
3,371,676	-				+0.4
3,371,712	-				-1.7
3,371,789	+		Psyr_2787	0.23	+0.7
3,371,850	+		Psyr_2787	0.35	+1.6
3,371,901	-		Psyr_2787	0.45	+0.6
3,372,102	-		Psyr_2787	0.85	-0.0
3,372,128	+				-1.6
3,372,128	+				-0.8
3,372,129	-				+0.2
3,372,179	+				+0.2
3,372,179	+				-1.8
3,372,179	+				-0.1
3,372,180	-				+1.6
3,372,180	-				+1.3
3,372,180	-				-1.4
3,372,180	-				-1.3
3,372,180	-				-1.7
3,372,253	+		Psyr_2788	0.17	-2.7
3,372,253	+		Psyr_2788	0.17	-0.1
3,372,308	+		Psyr_2788	0.29	-0.2
3,372,308	+		Psyr_2788	0.29	-1.0
3,372,308	+		Psyr_2788	0.29	+1.2
3,372,309	-		Psyr_2788	0.29	-0.2