Strain Fitness in Pseudomonas syringae pv. syringae B728a around Psyr_2267

Experiment: KB with Avocatin A 10 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	KB with Avocatin A 10 mM
2,631,327	+				-0.7
2,631,327	+				+0.6
2,631,327	+				+1.6
2,631,327	+				-0.0
2,631,327	+				+3.6
2,631,327	+				-0.0
2,631,327	+				+0.1
2,631,328	-				-1.0
2,631,328	-				+0.6
2,631,328	-				-1.4
2,631,570	+		Psyr_2266	0.34	+1.0
2,631,570	+		Psyr_2266	0.34	-0.6
2,631,633	+		Psyr_2266	0.41	-1.2
2,631,637	-		Psyr_2266	0.41	-0.9
2,631,771	-		Psyr_2266	0.56	+1.6
2,631,919	-		Psyr_2266	0.72	-1.2
2,632,281	+				-0.0
2,632,281	+				+2.7
2,632,281	+				+0.6
2,632,281	+				+1.2
2,632,282	-				-0.6
2,632,298	+				-0.6
2,632,350	+				-0.9
2,632,350	+				+1.4
2,632,350	+				-0.4
2,632,350	+				-1.0
2,632,350	+				-0.4
2,632,356	+				+0.6
2,632,357	-				-0.1
2,632,357	-				-1.1
2,632,629	+		Psyr_2267	0.23	+0.6
2,632,638	+		Psyr_2267	0.24	+1.0
2,632,696	-		Psyr_2267	0.27	+1.8
2,632,696	-		Psyr_2267	0.27	-1.1
2,632,786	-		Psyr_2267	0.33	-0.6
2,632,922	+		Psyr_2267	0.42	+1.3
2,632,923	-		Psyr_2267	0.42	+0.6
2,632,923	-		Psyr_2267	0.42	+1.1
2,632,923	-		Psyr_2267	0.42	-1.0
2,632,923	-		Psyr_2267	0.42	-0.0
2,633,181	+		Psyr_2267	0.59	+0.1
2,633,181	+		Psyr_2267	0.59	-0.4
2,633,238	+		Psyr_2267	0.63	+0.7
2,633,238	+		Psyr_2267	0.63	-2.0
2,633,238	+		Psyr_2267	0.63	-0.3
2,633,239	-		Psyr_2267	0.63	+0.6
2,633,239	-		Psyr_2267	0.63	+0.9
2,633,457	+		Psyr_2267	0.77	+0.7
2,633,457	+		Psyr_2267	0.77	+0.7
2,633,457	+		Psyr_2267	0.77	-0.2
2,633,457	+		Psyr_2267	0.77	+0.9
2,633,457	+		Psyr_2267	0.77	-0.5
2,633,457	+		Psyr_2267	0.77	+1.1
2,633,458	-		Psyr_2267	0.77	+1.4
2,633,458	-		Psyr_2267	0.77	-0.6
2,633,587	-		Psyr_2267	0.86	+0.8
2,633,611	-		Psyr_2267	0.88	-0.2
2,633,707	-				-0.2
2,633,707	-				-0.7
2,633,830	+				-1.5
2,633,830	+				-1.2
2,633,830	+				-0.8
2,633,831	-				+1.0
2,633,831	-				+0.2
2,634,016	+				-1.5
2,634,043	+				+1.0
2,634,535	-		Psyr_2268	0.58	-0.7
2,634,586	+		Psyr_2268	0.64	+0.6
2,634,586	+		Psyr_2268	0.64	+0.3
2,634,586	+		Psyr_2268	0.64	-3.1
2,634,586	+		Psyr_2268	0.64	+0.3
2,634,587	-		Psyr_2268	0.64	-0.4
2,634,636	+		Psyr_2268	0.69	+0.8
2,634,636	+		Psyr_2268	0.69	+1.4
2,634,689	-		Psyr_2268	0.75	-1.4
2,634,689	-		Psyr_2268	0.75	-1.6
2,634,689	-		Psyr_2268	0.75	+0.5