Strain Fitness in Pseudomonas syringae pv. syringae B728a around Psyr_2177

Experiment: KB with Avocatin A 10 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	KB with Avocatin A 10 mM
2,529,573	-		Psyr_2176	0.21	-0.2
2,529,698	+		Psyr_2176	0.31	-0.2
2,529,718	-		Psyr_2176	0.33	-0.5
2,529,789	-		Psyr_2176	0.39	+1.1
2,529,789	-		Psyr_2176	0.39	+1.9
2,529,926	-		Psyr_2176	0.51	-1.0
2,529,949	-		Psyr_2176	0.53	-2.0
2,529,949	-		Psyr_2176	0.53	-0.5
2,529,988	-		Psyr_2176	0.56	+0.3
2,530,058	+		Psyr_2176	0.62	-0.9
2,530,058	+		Psyr_2176	0.62	+0.9
2,530,058	+		Psyr_2176	0.62	+0.5
2,530,058	+		Psyr_2176	0.62	-0.7
2,530,058	+		Psyr_2176	0.62	-0.6
2,530,058	+		Psyr_2176	0.62	+0.5
2,530,058	+		Psyr_2176	0.62	-1.4
2,530,058	+		Psyr_2176	0.62	+1.5
2,530,059	-		Psyr_2176	0.62	-0.4
2,530,059	-		Psyr_2176	0.62	+0.1
2,530,059	-		Psyr_2176	0.62	-2.3
2,530,059	-		Psyr_2176	0.62	+0.0
2,530,059	-		Psyr_2176	0.62	-0.0
2,530,059	-		Psyr_2176	0.62	+1.5
2,530,059	-		Psyr_2176	0.62	-0.5
2,530,059	-		Psyr_2176	0.62	-0.1
2,530,059	-		Psyr_2176	0.62	+1.8
2,530,091	-		Psyr_2176	0.65	+1.1
2,530,091	-		Psyr_2176	0.65	-1.0
2,530,091	-		Psyr_2176	0.65	-1.5
2,530,098	+		Psyr_2176	0.66	-0.6
2,530,175	+		Psyr_2176	0.72	-1.1
2,530,176	-		Psyr_2176	0.72	-1.3
2,530,176	-		Psyr_2176	0.72	-0.7
2,530,176	-		Psyr_2176	0.72	-0.5
2,530,176	-		Psyr_2176	0.72	+1.8
2,530,178	+		Psyr_2176	0.73	-0.3
2,530,226	+		Psyr_2176	0.77	+0.0
2,530,226	+		Psyr_2176	0.77	-2.2
2,530,226	+		Psyr_2176	0.77	-0.5
2,530,226	+		Psyr_2176	0.77	+1.5
2,530,226	+		Psyr_2176	0.77	-0.5
2,530,227	-		Psyr_2176	0.77	+0.3
2,530,227	-		Psyr_2176	0.77	+0.5
2,530,227	-		Psyr_2176	0.77	+1.9
2,530,227	-		Psyr_2176	0.77	-0.1
2,530,227	-		Psyr_2176	0.77	+0.6
2,530,227	-		Psyr_2176	0.77	-1.0
2,530,227	-		Psyr_2176	0.77	+1.2
2,530,227	-		Psyr_2176	0.77	-1.4
2,530,322	+		Psyr_2176	0.85	+0.8
2,530,451	-				-0.7
2,530,485	+				-1.0
2,530,486	-				-1.4
2,530,501	+				-1.2
2,530,501	+				+0.2
2,530,610	+				-1.3
2,530,610	+				-1.8
2,530,610	+				-0.3
2,530,610	+				+1.0
2,530,610	+				+0.7
2,530,611	-				+0.2
2,530,611	-				+0.7
2,530,611	-				+1.9
2,530,611	-				-1.7
2,530,713	+		Psyr_2177	0.25	-1.7
2,530,713	+		Psyr_2177	0.25	+1.9
2,530,713	+		Psyr_2177	0.25	-1.4
2,530,713	+		Psyr_2177	0.25	+3.1
2,530,713	+		Psyr_2177	0.25	-0.6
2,530,714	-		Psyr_2177	0.25	+0.7
2,530,714	-		Psyr_2177	0.25	+0.7
2,530,717	+		Psyr_2177	0.26	-0.4
2,530,717	+		Psyr_2177	0.26	+0.2
2,530,717	+		Psyr_2177	0.26	+0.4
2,530,718	-		Psyr_2177	0.26	+1.5
2,530,718	-		Psyr_2177	0.26	-1.3
2,530,788	+		Psyr_2177	0.38	-0.5
2,530,789	-		Psyr_2177	0.38	-0.1
2,531,015	+		Psyr_2177	0.76	+1.7
2,531,016	-		Psyr_2177	0.76	+1.5
2,531,052	-		Psyr_2177	0.82	+2.0
2,531,150	-				+0.1
2,531,777	+				-0.8
2,531,778	-				+0.6
2,531,790	+				+1.5
2,531,792	+				+0.0
2,531,792	+				+0.2
2,531,883	-				+0.2
2,531,946	-				+1.5
2,532,032	+				-0.1
2,532,154	+				-0.6
2,532,154	+				+0.1
2,532,154	+				-2.3
2,532,154	+				-0.7
2,532,155	-				-0.8
2,532,155	-				+0.7
2,532,155	-				-1.0
2,532,155	-				-1.6
2,532,155	-				-0.3