Strain Fitness in Pseudomonas syringae pv. syringae B728a around Psyr_1610

Experiment: KB with Avocatin A 10 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	KB with Avocatin A 10 mM
1,812,937	-		Psyr_1609	0.75	-1.6
1,813,108	-		Psyr_1609	0.88	-0.0
1,813,108	-		Psyr_1609	0.88	+0.7
1,813,125	-		Psyr_1609	0.89	+1.6
1,813,125	-		Psyr_1609	0.89	+0.2
1,813,135	+				+0.4
1,813,136	-				+0.6
1,813,136	-				+1.1
1,813,234	+				+1.0
1,813,234	+				+0.1
1,813,261	+				+0.7
1,813,265	+				-1.8
1,813,265	+				+3.1
1,813,265	+				+0.1
1,813,265	+				-0.8
1,813,265	+				-0.4
1,813,265	+				-1.3
1,813,265	+				-1.1
1,813,266	-				+0.2
1,813,266	-				-0.4
1,813,266	-				-1.1
1,813,266	-				-0.4
1,813,266	-				+0.0
1,813,845	-				-0.1
1,814,078	+		Psyr_1610	0.34	-0.6
1,814,078	+		Psyr_1610	0.34	-1.3
1,814,078	+		Psyr_1610	0.34	-1.5
1,814,078	+		Psyr_1610	0.34	+3.1
1,814,079	-		Psyr_1610	0.34	-0.8
1,814,079	-		Psyr_1610	0.34	-0.6
1,814,079	-		Psyr_1610	0.34	-1.4
1,814,079	-		Psyr_1610	0.34	-0.9
1,814,235	-		Psyr_1610	0.58	+2.1
1,814,235	-		Psyr_1610	0.58	+0.8
1,814,235	-		Psyr_1610	0.58	-0.7
1,814,346	+		Psyr_1610	0.76	-0.4
1,814,883	-				-1.1
1,815,313	+		Psyr_1612	0.58	-1.2
1,815,314	-		Psyr_1612	0.58	-3.1