Strain Fitness in Pseudomonas syringae pv. syringae B728a around Psyr_0986

Experiment: KB with Avocatin A 10 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	KB with Avocatin A 10 mM
1,115,566	-				-2.9
1,115,580	-				-0.1
1,115,606	-				-0.3
1,115,632	-				+0.0
1,115,644	+				+2.5
1,115,645	-				+0.5
1,115,645	-				-0.7
1,115,645	-				+0.1
1,115,645	-				-0.2
1,115,645	-				+2.6
1,115,645	-				+0.6
1,115,674	+				-0.3
1,115,674	+				-0.5
1,115,674	+				+2.6
1,115,675	-				-1.1
1,115,830	+		Psyr_0985	0.32	-0.1
1,115,831	-		Psyr_0985	0.32	-0.3
1,115,831	-		Psyr_0985	0.32	+0.0
1,115,831	-		Psyr_0985	0.32	-0.3
1,115,831	-		Psyr_0985	0.32	-1.4
1,115,831	-		Psyr_0985	0.32	-1.4
1,115,831	-		Psyr_0985	0.32	-0.4
1,115,836	+		Psyr_0985	0.33	-0.3
1,115,836	+		Psyr_0985	0.33	-2.4
1,115,836	+		Psyr_0985	0.33	-0.6
1,115,837	-		Psyr_0985	0.33	-2.1
1,115,837	-		Psyr_0985	0.33	-0.2
1,116,040	+		Psyr_0985	0.68	+0.1
1,116,040	+		Psyr_0985	0.68	+0.3
1,116,210	+				-1.0
1,116,211	-				-0.1
1,116,211	-				-0.3
1,116,258	+				+0.4
1,116,267	+				-1.3
1,116,267	+				-0.8
1,116,268	-				-0.5
1,116,268	-				-0.0
1,116,268	-				-1.1
1,116,268	-				+0.3
1,116,268	-				+0.0
1,116,303	+				+0.5
1,116,303	+				-0.7
1,116,303	+				-0.6
1,116,304	-				+0.0
1,116,304	-				-0.6
1,116,304	-				-0.1
1,116,304	-				+1.0
1,116,352	+				-1.3
1,116,352	+				-0.5
1,116,352	+				-0.4
1,116,352	+				+2.2
1,116,352	+				-0.6
1,116,352	+				-0.4
1,116,352	+				+0.1
1,116,353	-				+0.7
1,116,353	-				+0.5
1,116,353	-				+2.4
1,116,353	-				+0.1
1,116,353	-				+0.6
1,116,373	+				+0.6
1,116,373	+				-0.7
1,116,373	+				+0.1
1,116,373	+				+1.9
1,116,373	+				-1.7
1,116,373	+				-0.7
1,116,373	+				+1.6
1,116,373	+				+0.5
1,116,373	+				+0.5
1,116,373	+				+0.5
1,116,373	+				-1.0
1,116,374	-				+0.5
1,116,374	-				-1.2
1,116,374	-				-1.0
1,116,374	-				-0.4
1,116,374	-				+0.7
1,116,374	-				-0.5
1,116,374	-				-0.6
1,116,374	-				+2.2
1,116,374	-				-0.6
1,116,374	-				-0.3
1,116,374	-				-1.3
1,116,374	-				-1.4
1,116,374	-				-0.1
1,116,382	-				-0.2
1,116,382	-				+1.3
1,116,382	-				+0.8
1,116,382	-				+0.4
1,116,382	-				-1.0
1,116,415	+				-1.2
1,116,415	+				-0.5
1,116,416	-				-0.2
1,116,470	+				-1.4
1,116,470	+				-0.3
1,116,470	+				+0.2
1,116,471	-				-1.8
1,116,493	+				+1.6
1,116,494	-				+0.5
1,116,494	-				-0.7
1,116,494	-				+0.0
1,116,576	-		Psyr_0986	0.10	-0.1
1,116,652	+		Psyr_0986	0.18	+0.3
1,116,652	+		Psyr_0986	0.18	-1.0
1,116,653	-		Psyr_0986	0.18	-0.8
1,116,653	-		Psyr_0986	0.18	-0.4
1,116,823	+		Psyr_0986	0.35	-2.3
1,117,223	-		Psyr_0986	0.75	+0.1
1,117,449	+				-1.5
1,117,450	-				+0.6
1,117,767	-				+1.6
1,117,797	-				-0.8