Strain Fitness in Pseudomonas syringae pv. syringae B728a around Psyr_0793

Experiment: KB with Avocatin A 10 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	KB with Avocatin A 10 mM
899,248	+				+1.7
899,248	+				-0.3
899,248	+				-1.5
899,248	+				-0.0
899,249	-				-0.9
899,249	-				-0.8
899,384	+		Psyr_0792	0.22	+0.2
899,385	-		Psyr_0792	0.22	-0.4
899,575	+		Psyr_0792	0.52	-0.2
899,576	-		Psyr_0792	0.53	+1.1
899,576	-		Psyr_0792	0.53	-1.1
899,638	-		Psyr_0792	0.62	-1.6
899,737	-		Psyr_0792	0.78	-1.3
899,858	+				+0.4
899,858	+				-0.6
899,886	+				-0.3
899,886	+				+0.1
899,929	+				+0.7
899,929	+				+0.4
899,929	+				-0.7
899,929	+				-0.3
899,929	+				-0.7
899,930	-				-0.1
899,930	-				-0.3
899,962	+				+0.4
899,986	-				-1.3
900,100	+		Psyr_0793	0.27	-2.0
900,112	+		Psyr_0793	0.30	-2.2
900,112	+		Psyr_0793	0.30	-1.4
900,112	+		Psyr_0793	0.30	-0.0
900,112	+		Psyr_0793	0.30	-0.8
900,113	-		Psyr_0793	0.30	-0.7
900,302	-		Psyr_0793	0.68	-0.1
900,302	-		Psyr_0793	0.68	+0.1
900,367	-		Psyr_0793	0.81	-0.7
900,380	+		Psyr_0793	0.83	-1.6
900,381	-		Psyr_0793	0.84	-0.7
900,456	+				+0.2
900,456	+				-0.8
900,456	+				-0.2
900,457	-				-0.5
900,457	-				-0.0
900,457	-				-0.8
900,457	-				-1.2
900,457	-				-0.2
900,457	-				+0.3
900,457	-				+0.5
900,457	-				+1.5
900,457	-				-0.9
900,457	-				-0.1
900,469	+				-0.1
900,469	+				-0.7
900,470	-				-0.2
900,470	-				-1.2
900,470	-				+0.9
900,470	-				+0.2
900,470	-				-0.4
900,550	+				+0.2
900,550	+				+0.2
900,550	+				-0.6
900,550	+				-0.1
900,551	-				-0.1
900,551	-				+1.4
900,551	-				-0.7
900,558	+				+0.2
900,558	+				+0.5
900,558	+				+0.7
900,558	+				-0.4
900,558	+				+0.8
900,558	+				-0.7
900,558	+				-1.3
900,558	+				+1.7
900,559	-				-1.3
900,559	-				-0.9
900,559	-				+0.0
900,559	-				+0.1
900,559	-				-0.4
900,559	-				+0.8
900,559	-				+0.4
900,561	-				-0.1
900,561	-				-0.5
900,561	-				-0.7
900,588	-				+0.5
900,588	-				+0.1
900,818	+				-0.8
900,818	+				-0.8
900,818	+				-1.4
900,819	-				+0.6
901,441	-				-0.8
901,441	-				+3.2
901,441	-				-0.7
901,441	-				-0.7
901,441	-				+0.3
901,441	-				+0.9
901,441	-				+0.8
901,441	-				-1.5
901,441	-				-0.9
901,452	-				+0.3
901,452	-				+0.1