Experiment: KB with Avocatin A 10 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Psyr_0631 and Psyr_0632 overlap by 8 nucleotides Psyr_0632 and Psyr_0633 are separated by 275 nucleotides Psyr_0633 and Psyr_0634 are separated by 25 nucleotides
Psyr_0631: Psyr_0631 - Flavoprotein, at 721,896 to 722,525
_0631
Psyr_0632: Psyr_0632 - Protein of unknown function DUF1375, at 722,518 to 722,802
_0632
Psyr_0633: Psyr_0633 - conserved hypothetical protein, at 723,078 to 723,719
_0633
Psyr_0634: Psyr_0634 - MORN motif protein, at 723,745 to 725,472
_0634
Position (kb) 723
724 Strain fitness (log2 ratio) -3
-2
-1
0
1
2
3 at 722.507 kb on + strand at 722.507 kb on + strand at 722.523 kb on + strand at 722.524 kb on - strand at 722.524 kb on - strand at 722.524 kb on - strand at 722.524 kb on - strand at 722.614 kb on + strand, within Psyr_0632 at 722.614 kb on + strand, within Psyr_0632 at 722.614 kb on + strand, within Psyr_0632 at 722.614 kb on + strand, within Psyr_0632 at 722.614 kb on + strand, within Psyr_0632 at 722.614 kb on + strand, within Psyr_0632 at 722.614 kb on + strand, within Psyr_0632 at 722.615 kb on - strand, within Psyr_0632 at 722.615 kb on - strand, within Psyr_0632 at 722.615 kb on - strand, within Psyr_0632 at 722.615 kb on - strand, within Psyr_0632 at 722.615 kb on - strand, within Psyr_0632 at 722.615 kb on - strand, within Psyr_0632 at 722.615 kb on - strand, within Psyr_0632 at 722.615 kb on - strand, within Psyr_0632 at 722.615 kb on - strand, within Psyr_0632 at 722.615 kb on - strand, within Psyr_0632 at 722.634 kb on + strand, within Psyr_0632 at 722.634 kb on + strand, within Psyr_0632 at 722.634 kb on + strand, within Psyr_0632 at 722.634 kb on + strand, within Psyr_0632 at 722.634 kb on + strand, within Psyr_0632 at 722.634 kb on + strand, within Psyr_0632 at 722.634 kb on + strand, within Psyr_0632 at 722.634 kb on + strand, within Psyr_0632 at 722.634 kb on + strand, within Psyr_0632 at 722.634 kb on + strand, within Psyr_0632 at 722.634 kb on + strand, within Psyr_0632 at 722.634 kb on + strand, within Psyr_0632 at 722.634 kb on + strand, within Psyr_0632 at 722.634 kb on + strand, within Psyr_0632 at 722.634 kb on + strand, within Psyr_0632 at 722.635 kb on - strand, within Psyr_0632 at 722.635 kb on - strand, within Psyr_0632 at 722.635 kb on - strand, within Psyr_0632 at 722.635 kb on - strand, within Psyr_0632 at 722.635 kb on - strand, within Psyr_0632 at 722.635 kb on - strand, within Psyr_0632 at 722.635 kb on - strand, within Psyr_0632 at 722.635 kb on - strand, within Psyr_0632 at 722.635 kb on - strand, within Psyr_0632 at 722.635 kb on - strand, within Psyr_0632 at 722.635 kb on - strand, within Psyr_0632 at 722.635 kb on - strand, within Psyr_0632 at 722.638 kb on + strand, within Psyr_0632 at 722.638 kb on + strand, within Psyr_0632 at 722.638 kb on + strand, within Psyr_0632 at 722.638 kb on + strand, within Psyr_0632 at 722.638 kb on + strand, within Psyr_0632 at 722.638 kb on + strand, within Psyr_0632 at 722.638 kb on + strand, within Psyr_0632 at 722.638 kb on + strand, within Psyr_0632 at 722.638 kb on + strand, within Psyr_0632 at 722.638 kb on + strand, within Psyr_0632 at 722.638 kb on + strand, within Psyr_0632 at 722.638 kb on + strand, within Psyr_0632 at 722.638 kb on + strand, within Psyr_0632 at 722.639 kb on - strand, within Psyr_0632 at 722.639 kb on - strand, within Psyr_0632 at 722.639 kb on - strand, within Psyr_0632 at 722.639 kb on - strand, within Psyr_0632 at 722.639 kb on - strand, within Psyr_0632 at 722.639 kb on - strand, within Psyr_0632 at 722.639 kb on - strand, within Psyr_0632 at 722.639 kb on - strand, within Psyr_0632 at 722.639 kb on - strand, within Psyr_0632 at 722.639 kb on - strand, within Psyr_0632 at 722.695 kb on + strand, within Psyr_0632 at 722.801 kb on - strand at 722.838 kb on + strand at 722.838 kb on + strand at 722.839 kb on - strand at 722.839 kb on - strand at 722.839 kb on - strand at 722.840 kb on + strand at 722.841 kb on - strand at 722.841 kb on - strand at 722.841 kb on - strand at 722.841 kb on - strand at 722.841 kb on - strand at 722.841 kb on - strand at 722.841 kb on - strand at 722.842 kb on + strand at 722.842 kb on + strand at 722.842 kb on + strand at 722.842 kb on + strand at 722.842 kb on + strand at 722.842 kb on + strand at 722.843 kb on - strand at 722.843 kb on - strand at 722.843 kb on - strand at 722.843 kb on - strand at 722.843 kb on - strand at 722.843 kb on - strand at 722.843 kb on - strand at 722.843 kb on - strand at 722.843 kb on - strand at 722.843 kb on - strand at 723.079 kb on + strand at 723.079 kb on + strand at 723.079 kb on + strand at 723.079 kb on + strand at 723.079 kb on + strand at 723.079 kb on + strand at 723.080 kb on - strand at 723.080 kb on - strand at 723.080 kb on - strand at 723.080 kb on - strand at 723.080 kb on - strand at 723.080 kb on - strand at 723.080 kb on - strand at 723.080 kb on - strand at 723.080 kb on - strand at 723.080 kb on - strand at 723.190 kb on + strand, within Psyr_0633 at 723.216 kb on - strand, within Psyr_0633 at 723.346 kb on + strand, within Psyr_0633 at 723.347 kb on - strand, within Psyr_0633 at 723.347 kb on - strand, within Psyr_0633 at 723.347 kb on - strand, within Psyr_0633 at 723.347 kb on - strand, within Psyr_0633 at 723.715 kb on + strand at 723.715 kb on + strand at 723.715 kb on + strand at 723.715 kb on + strand at 723.715 kb on + strand at 723.715 kb on + strand at 723.715 kb on + strand at 723.716 kb on - strand at 723.716 kb on - strand at 723.716 kb on - strand at 723.716 kb on - strand at 723.716 kb on - strand at 723.716 kb on - strand at 723.716 kb on - strand at 723.716 kb on - strand at 723.716 kb on - strand at 723.719 kb on + strand at 723.719 kb on + strand at 723.719 kb on + strand at 723.719 kb on + strand at 723.719 kb on + strand at 723.719 kb on + strand at 723.720 kb on - strand at 723.720 kb on - strand at 723.720 kb on - strand at 723.720 kb on - strand at 723.720 kb on - strand at 723.720 kb on - strand at 723.720 kb on - strand at 723.720 kb on - strand at 723.734 kb on + strand at 723.740 kb on + strand at 723.740 kb on + strand at 723.741 kb on - strand at 723.741 kb on - strand at 723.741 kb on - strand at 723.859 kb on + strand at 723.859 kb on + strand at 723.911 kb on + strand at 723.911 kb on + strand at 723.911 kb on + strand at 723.911 kb on + strand at 723.911 kb on + strand at 723.911 kb on + strand at 723.911 kb on + strand at 723.911 kb on + strand at 723.912 kb on - strand at 723.912 kb on - strand at 723.912 kb on - strand at 723.912 kb on - strand at 723.912 kb on - strand at 723.973 kb on + strand, within Psyr_0634 at 723.973 kb on + strand, within Psyr_0634 at 723.973 kb on + strand, within Psyr_0634 at 723.973 kb on + strand, within Psyr_0634 at 723.974 kb on - strand, within Psyr_0634 at 723.974 kb on - strand, within Psyr_0634 at 723.974 kb on - strand, within Psyr_0634 at 723.974 kb on - strand, within Psyr_0634 at 723.974 kb on - strand, within Psyr_0634 at 723.974 kb on - strand, within Psyr_0634 at 723.990 kb on - strand, within Psyr_0634 at 723.990 kb on - strand, within Psyr_0634 at 724.098 kb on - strand, within Psyr_0634 at 724.241 kb on + strand, within Psyr_0634 at 724.241 kb on + strand, within Psyr_0634 at 724.241 kb on + strand, within Psyr_0634 at 724.241 kb on + strand, within Psyr_0634 at 724.242 kb on - strand, within Psyr_0634 at 724.242 kb on - strand, within Psyr_0634 at 724.242 kb on - strand, within Psyr_0634 at 724.242 kb on - strand, within Psyr_0634 at 724.406 kb on + strand, within Psyr_0634 at 724.406 kb on + strand, within Psyr_0634 at 724.406 kb on + strand, within Psyr_0634 at 724.406 kb on + strand, within Psyr_0634 at 724.407 kb on - strand, within Psyr_0634 at 724.407 kb on - strand, within Psyr_0634 at 724.407 kb on - strand, within Psyr_0634 at 724.463 kb on + strand, within Psyr_0634 at 724.464 kb on - strand, within Psyr_0634 at 724.655 kb on + strand, within Psyr_0634 at 724.655 kb on + strand, within Psyr_0634 at 724.656 kb on - strand, within Psyr_0634 at 724.656 kb on - strand, within Psyr_0634 at 724.656 kb on - strand, within Psyr_0634 at 724.683 kb on - strand, within Psyr_0634
Per-strain Table
Position Strand Gene LocusTag Fraction KB with Avocatin A 10 mM remove 722,507 + +0.1 722,507 + -1.7 722,523 + +1.1 722,524 - -0.1 722,524 - +0.7 722,524 - -0.3 722,524 - +1.0 722,614 + Psyr_0632 0.34 +3.3 722,614 + Psyr_0632 0.34 -1.1 722,614 + Psyr_0632 0.34 +1.0 722,614 + Psyr_0632 0.34 +0.6 722,614 + Psyr_0632 0.34 -1.1 722,614 + Psyr_0632 0.34 +2.0 722,614 + Psyr_0632 0.34 +0.0 722,615 - Psyr_0632 0.34 -0.5 722,615 - Psyr_0632 0.34 +0.1 722,615 - Psyr_0632 0.34 -2.9 722,615 - Psyr_0632 0.34 +0.8 722,615 - Psyr_0632 0.34 -1.3 722,615 - Psyr_0632 0.34 +0.1 722,615 - Psyr_0632 0.34 -0.1 722,615 - Psyr_0632 0.34 +2.1 722,615 - Psyr_0632 0.34 -1.3 722,615 - Psyr_0632 0.34 -0.9 722,634 + Psyr_0632 0.41 +0.1 722,634 + Psyr_0632 0.41 +2.7 722,634 + Psyr_0632 0.41 -1.6 722,634 + Psyr_0632 0.41 -0.2 722,634 + Psyr_0632 0.41 +1.7 722,634 + Psyr_0632 0.41 -0.7 722,634 + Psyr_0632 0.41 +0.9 722,634 + Psyr_0632 0.41 +0.7 722,634 + Psyr_0632 0.41 -1.3 722,634 + Psyr_0632 0.41 -0.7 722,634 + Psyr_0632 0.41 -0.7 722,634 + Psyr_0632 0.41 -1.1 722,634 + Psyr_0632 0.41 +0.2 722,634 + Psyr_0632 0.41 -1.1 722,634 + Psyr_0632 0.41 +1.0 722,635 - Psyr_0632 0.41 +0.4 722,635 - Psyr_0632 0.41 -0.6 722,635 - Psyr_0632 0.41 +0.6 722,635 - Psyr_0632 0.41 +0.3 722,635 - Psyr_0632 0.41 +0.7 722,635 - Psyr_0632 0.41 +0.2 722,635 - Psyr_0632 0.41 -0.3 722,635 - Psyr_0632 0.41 -1.6 722,635 - Psyr_0632 0.41 +0.2 722,635 - Psyr_0632 0.41 -0.9 722,635 - Psyr_0632 0.41 -0.7 722,635 - Psyr_0632 0.41 -0.4 722,638 + Psyr_0632 0.42 -1.5 722,638 + Psyr_0632 0.42 -0.0 722,638 + Psyr_0632 0.42 -0.1 722,638 + Psyr_0632 0.42 +1.2 722,638 + Psyr_0632 0.42 +0.9 722,638 + Psyr_0632 0.42 -0.2 722,638 + Psyr_0632 0.42 -1.8 722,638 + Psyr_0632 0.42 -1.9 722,638 + Psyr_0632 0.42 +0.9 722,638 + Psyr_0632 0.42 +1.3 722,638 + Psyr_0632 0.42 +1.0 722,638 + Psyr_0632 0.42 -1.9 722,638 + Psyr_0632 0.42 -0.3 722,639 - Psyr_0632 0.42 +0.2 722,639 - Psyr_0632 0.42 +0.7 722,639 - Psyr_0632 0.42 -0.5 722,639 - Psyr_0632 0.42 +0.4 722,639 - Psyr_0632 0.42 -0.9 722,639 - Psyr_0632 0.42 +1.0 722,639 - Psyr_0632 0.42 +0.2 722,639 - Psyr_0632 0.42 -0.9 722,639 - Psyr_0632 0.42 -0.8 722,639 - Psyr_0632 0.42 -0.1 722,695 + Psyr_0632 0.62 +0.1 722,801 - -0.4 722,838 + +0.7 722,838 + +3.7 722,839 - -0.6 722,839 - -1.3 722,839 - -0.6 722,840 + -0.0 722,841 - +0.9 722,841 - +1.0 722,841 - -0.6 722,841 - +2.3 722,841 - -1.8 722,841 - +3.7 722,841 - +1.7 722,842 + +0.7 722,842 + -0.8 722,842 + -1.1 722,842 + -0.3 722,842 + -0.5 722,842 + +0.3 722,843 - -2.6 722,843 - -0.9 722,843 - +0.4 722,843 - -1.3 722,843 - -3.6 722,843 - -0.6 722,843 - -1.5 722,843 - +0.4 722,843 - +1.4 722,843 - +1.7 723,079 + +2.2 723,079 + -1.5 723,079 + -0.0 723,079 + -0.5 723,079 + -0.2 723,079 + +3.3 723,080 - +1.9 723,080 - +0.9 723,080 - +1.7 723,080 - +0.1 723,080 - +0.7 723,080 - -1.2 723,080 - -1.3 723,080 - -0.2 723,080 - +0.9 723,080 - +3.3 723,190 + Psyr_0633 0.17 -2.9 723,216 - Psyr_0633 0.21 -1.1 723,346 + Psyr_0633 0.42 -0.6 723,347 - Psyr_0633 0.42 +0.5 723,347 - Psyr_0633 0.42 -1.5 723,347 - Psyr_0633 0.42 +0.4 723,347 - Psyr_0633 0.42 -0.8 723,715 + +0.4 723,715 + +0.3 723,715 + +3.3 723,715 + -0.6 723,715 + -1.1 723,715 + -0.5 723,715 + +0.1 723,716 - -0.2 723,716 - -1.9 723,716 - -0.6 723,716 - +2.0 723,716 - -0.6 723,716 - -0.7 723,716 - +0.3 723,716 - -0.0 723,716 - +1.2 723,719 + +1.0 723,719 + -0.5 723,719 + -0.9 723,719 + +0.4 723,719 + -0.7 723,719 + +0.1 723,720 - -0.0 723,720 - +1.4 723,720 - -0.5 723,720 - +0.1 723,720 - +0.7 723,720 - -0.6 723,720 - +1.0 723,720 - -0.2 723,734 + +0.0 723,740 + -0.1 723,740 + -2.3 723,741 - -0.2 723,741 - -0.8 723,741 - +0.5 723,859 + -0.3 723,859 + -2.1 723,911 + -0.9 723,911 + +0.1 723,911 + +1.4 723,911 + -1.0 723,911 + +0.4 723,911 + +0.2 723,911 + -1.3 723,911 + -1.0 723,912 - +0.4 723,912 - -0.9 723,912 - -0.8 723,912 - +0.2 723,912 - +2.5 723,973 + Psyr_0634 0.13 -1.0 723,973 + Psyr_0634 0.13 +0.0 723,973 + Psyr_0634 0.13 -0.1 723,973 + Psyr_0634 0.13 -1.1 723,974 - Psyr_0634 0.13 +0.6 723,974 - Psyr_0634 0.13 +0.9 723,974 - Psyr_0634 0.13 +0.5 723,974 - Psyr_0634 0.13 -0.6 723,974 - Psyr_0634 0.13 +0.1 723,974 - Psyr_0634 0.13 +1.7 723,990 - Psyr_0634 0.14 +0.3 723,990 - Psyr_0634 0.14 +1.7 724,098 - Psyr_0634 0.20 -1.6 724,241 + Psyr_0634 0.29 +0.1 724,241 + Psyr_0634 0.29 -1.4 724,241 + Psyr_0634 0.29 -0.6 724,241 + Psyr_0634 0.29 +0.9 724,242 - Psyr_0634 0.29 -0.5 724,242 - Psyr_0634 0.29 -0.7 724,242 - Psyr_0634 0.29 -0.5 724,242 - Psyr_0634 0.29 +1.5 724,406 + Psyr_0634 0.38 +0.9 724,406 + Psyr_0634 0.38 -1.2 724,406 + Psyr_0634 0.38 +0.7 724,406 + Psyr_0634 0.38 -0.6 724,407 - Psyr_0634 0.38 +0.4 724,407 - Psyr_0634 0.38 -1.2 724,407 - Psyr_0634 0.38 +0.7 724,463 + Psyr_0634 0.42 -0.3 724,464 - Psyr_0634 0.42 -0.7 724,655 + Psyr_0634 0.53 +2.7 724,655 + Psyr_0634 0.53 -0.2 724,656 - Psyr_0634 0.53 +1.7 724,656 - Psyr_0634 0.53 +1.1 724,656 - Psyr_0634 0.53 -0.5 724,683 - Psyr_0634 0.54 +2.0
Or see this region's nucleotide sequence